KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:55 2014 Check: 00 .. Name: bmy_14747T0/1-762 Len: 856 Check: 2460 Weight: 1.00 Name: ENSP00000368174/1-840 Len: 856 Check: 8727 Weight: 1.00 Name: ENSBTAP00000019471/1-816 Len: 856 Check: 8122 Weight: 1.00 Name: BACU014769/1-770 Len: 856 Check: 3559 Weight: 1.00 Name: ENSTTRP00000012236/1-821 Len: 856 Check: 6436 Weight: 1.00 // 1 50 bmy_14747T0/1-762 MTLSRSPSSA ASLQFPALCP WPWAVAASSL TS------HK PRRLKALRPA ENSP00000368174/1-840 ---MNGEYRG RGFGRGRFQS WKRGRGGGNF SGKWREREHR PDLSKTTGKR ENSBTAP00000019471/1-816 ---MNGKYRG RGFGQGRFQS WKSGRGGRGF SGKWREREHR PDLNKATGKH BACU014769/1-770 ---MNGEYRG RGFGRGRFQN WKRRRGGGSF SGKWRELEHR PDVNKATGKH ENSTTRP00000012236/1-821 ---MNGEYRG RGFGRGRFQS WKRGRGGGSF LGKWRELKHR PDLNKATGKH 51 100 bmy_14747T0/1-762 PPPRAARRFR ---------- ---------- ---------- ----FLNKPH ENSP00000368174/1-840 TSEQTPQFLL STKTPQSMQS TLDRFIPYKG WKLYFSEVYS DSSPLIEKIQ ENSBTAP00000019471/1-816 -PEQTPQSLL -------LQS TLDHFIPYKG WKLYFSEVYS DSIPFIEKIE BACU014769/1-770 -P-------- ---------- ---------- -------VYS DSSPFIEKIQ ENSTTRP00000012236/1-821 -PEQTPQSLL -------LQS TLDQFIPYKG WKLYLSEVYS DSSPFIEKIQ 101 150 bmy_14747T0/1-762 NLCYYNQRWI NSYHI----K AGSFIC---- ---------- ---------- ENSP00000368174/1-840 AFEKFFTRHI DLYDKDEIER KGSILVDFKE LTEGGEVTNL IPDIATELRD ENSBTAP00000019471/1-816 AFESFFTERI ELYDKDEIER KGSILVDFKE LINDDEIIKL IPNIANELRD BACU014769/1-770 AFENFFTRRI DLYDKDEIER KGSILVDFKE LTKDDEIAKL IPNIANELRD ENSTTRP00000012236/1-821 AFENFFARRI DLYDKDEIER KGSILVDFKE LTKDDEIAKL IPNIANELRD 151 200 bmy_14747T0/1-762 ---------- ---QKVLTKD LERHAAELQA QEGLSRNGET MVNVPHIHTR ENSP00000368174/1-840 APEKTLACMG LAIHQVLTKD LERHAAELQA QEGLSNDGET MVNVPHIHAR ENSBTAP00000019471/1-816 TPEKTLACMG LAIHQVLTKD LERHAAELQA QEGLSRNGET VVNVPHIHAR BACU014769/1-770 TPEKTLACMG LAIHQVLTKD LERHAAELQA QEGLSRNGET MVNVPHIHTR ENSTTRP00000012236/1-821 TPDKTLACMG LAIHQVLTKD LERHAAELQA QEGLSRNGET MVNVPHIHTR 201 250 bmy_14747T0/1-762 VYNYEPLTQL KNVRANYYGK YIALRGTVVR VSNIKPLCTK MAFLCAACGE ENSP00000368174/1-840 VYNYEPLTQL KNVRANYYGK YIALRGTVVR VSNIKPLCTK MAFLCAACGE ENSBTAP00000019471/1-816 VYNYEPLTQL KNVRANYYGK YIALRGTVVR VSNTKPLCTK MAFLCAACGE BACU014769/1-770 VYNYEPLTQL KNVRANYYGK YIALRGTVVR VSNIKPLCTK MAFLCSACGE ENSTTRP00000012236/1-821 VYNYEPLTQL KNVRANYYGK YIALRGTVVR VSNIKPLCTK MAFLCAACGE 251 300 bmy_14747T0/1-762 IQSFSLPDGK YNLPTKCPVP ACRGKSFTAL RSSPLTATMD WQSIKIQELM ENSP00000368174/1-840 IQSFPLPDGK YSLPTKCPVP VCRGRSFTAL RSSPLTVTMD WQSIKIQELM ENSBTAP00000019471/1-816 IQSLSLPDGK YNLPTKCPVP ACRGKSFTAL RSSPLTVTMD WQSIKIQELM BACU014769/1-770 IQSFSLPDGK YNLPTKCPVP ACRGKSFTAL RSSPLTATMD WQSIKIQELM ENSTTRP00000012236/1-821 IQSFSLPDGK YNLPTKCPVP ACRGKSFTAL RSSPLTVTMD WQSIKIQESM 301 350 bmy_14747T0/1-762 SDDQREAGRI PRTIECELVH DLVDSCVPGD TVTINGVVKV SNAEEGSRNK ENSP00000368174/1-840 SDDQREAGRI PRTIECELVH DLVDSCVPGD TVTITGIVKV SNAEEGSRNK ENSBTAP00000019471/1-816 SDDQREAGRI PRTIECELVH DLVDSCVPGD TVTITGVVKV SNAE------ BACU014769/1-770 SDDQREAGRI PRTIECELVH DLVDSCVPGD TVTITGVVKV SNAEEGSRNK ENSTTRP00000012236/1-821 SDDQREAGRI PRTIECELVH DLVDSCVPGD TVTITGVVKV SNAEEGSRNK 351 400 bmy_14747T0/1-762 NDKCMFLLYI EANSVSNSKG QKTKASEDGC KHGTLMEFSL KDLYAIQEIQ ENSP00000368174/1-840 NDKCMFLLYI EANSISNSKG QKTKSSEDGC KHGMLMEFSL KDLYAIQEIQ ENSBTAP00000019471/1-816 ---------- EANSVSNNKG QKTKASEDGC KHGALMEFSL KDLYAIQEIQ BACU014769/1-770 NDKCMFLLYI EANSVSNSKG QKTKASEDGC KHGTLMEFSL KDLYAIQEIQ ENSTTRP00000012236/1-821 NDKCMFLLYI EANSVSNSKG QKTKPSEDEY KHGTLMEFSL KDLYAIQEIQ 401 450 bmy_14747T0/1-762 SEENLFKLIV NSLCPVIFGH ELVKAGLTLA LFGGSQKYAD DKNRIPIRGD ENSP00000368174/1-840 AEENLFKLIV NSLCPVIFGH ELVKAGLALA LFGGSQKYAD DKNRIPIRGD ENSBTAP00000019471/1-816 SEENLFKLIV NSLCPVIFGH ELVKAGLALA LFGGSQKYAD DKNRIPIRGD BACU014769/1-770 SEENLFKLIV NSLCPVI--- ---------- -FGH------ ---------- ENSTTRP00000012236/1-821 SEENLFKLIV ---------- -LVKAGLALA LFGGSQKYVD DKNRIPIRGD 451 500 bmy_14747T0/1-762 PHVLVVGDPG LGKSQMLQAV CSVAPRGVYV CGNTTTTSGL TVTLSKDSSS ENSP00000368174/1-840 PHILVVGDPG LGKSQMLQAA CNVAPRGVYV CGNTTTTSGL TVTLSKDSSS ENSBTAP00000019471/1-816 PHVLVVGDPG LGKSQMLQAV CSVAPRGVYV CGNTTTTSGL TVTLSKDSSS BACU014769/1-770 ---------- -------EAV CSVAPRGVYV CGNTTTTSGL TVTLSKDSSS ENSTTRP00000012236/1-821 PHVLVVGDPG LGKSQMLQAV CNVAPRGVYV CGNTTTTSGL TVTLSKDSSS 501 550 bmy_14747T0/1-762 GDFALEAGAL VLGDQ----- --------GI CGIDEFDKMG NQHQALLEAM ENSP00000368174/1-840 GDFALEAGAL VLGDQ----- --------GI CGIDEFDKMG NQHQALLEAM ENSBTAP00000019471/1-816 GDFALEAGAL VLGDQ----- --------GI CGIDEFDKMG NQHQALLEAM BACU014769/1-770 GDFALEAGAL VLGDQVCSKS HLDSTVPTSI CGIDEFDKMG NQHQALLEAM ENSTTRP00000012236/1-821 GDFALEAGAL VLGDQ----- --------GI CGIDEFDKMG NQHQALLEAM 551 600 bmy_14747T0/1-762 EQQCISLAKA GVVCSLPART SIIAAANPVG GHYNKAKTVS ENLKMGSALL ENSP00000368174/1-840 EQQSISLAKA GVVCSLPART SIIAAANPVG GHYNKAKTVS ENLKMGSALL ENSBTAP00000019471/1-816 EQQSISLAKA GMVCSLPART SIIAAANPVG GHYNKAKTVS ENLKMGSALL BACU014769/1-770 EQQCISLAKA GVVCSLPART SIIAAANPVG GHYNKAKTVS ENLKMGSALL ENSTTRP00000012236/1-821 EQQCISLAKA GVVCSLPART SIIAAANPVG GHYNKAKTVS ENLKMGSALL 601 650 bmy_14747T0/1-762 SRFDLVFILL DTPNEDHDHL LSEHVIAIRA GKQRAVSSAT VARMNSQDSN ENSP00000368174/1-840 SRFDLVFILL DTPNEHHDHL LSEHVIAIRA GKQRTISSAT VARMNSQDSN ENSBTAP00000019471/1-816 SRFDLVFILL DTPNEDHDHL LSEHVIAIRA GKQRAVSSAT VARMNSQDSN BACU014769/1-770 SRFDLVFILL DTPNEDHDHL LSEHVIAIRA GKQRAVSSAT VARMNSQDSN ENSTTRP00000012236/1-821 SRFDLVFILL DTPNEDHDHL LSEHVIAIRA GKQRAVSSAT VARMNSQDSN 651 700 bmy_14747T0/1-762 TSILEVVSDK PLSERLKVVP GETIDPIPHQ LLRKYIGYAR QYVSPRLSTE ENSP00000368174/1-840 TSVLEVVSEK PLSERLKVVP GETIDPIPHQ LLRKYIGYAR QYVYPRLSTE ENSBTAP00000019471/1-816 TSILEVVSDK PLSERLKVVP GETIDPIPHQ LLRKYIGYSR QYVYPRLSTE BACU014769/1-770 TSILEVVSDK PLSERLKVVP GETIDPIPHQ LLRKYIGYAR QYVSPRLSTE ENSTTRP00000012236/1-821 TSILEVVSDK PLSERLKVVP GETIDPIPHQ LLRKYIGYAR QYVSPRLSTE 701 750 bmy_14747T0/1-762 ATQILQDFYL ELRKQSQRLN SSPITTRQLE SLIRLTEARA RLELREEATR ENSP00000368174/1-840 AARVLQDFYL ELRKQSQRLN SSPITTRQLE SLIRLTEARA RLELREEATK ENSBTAP00000019471/1-816 AAQILQNFYL ELRKQSQRLS SSPITTRQLE SLIRLTEARA RLELREEATK BACU014769/1-770 AAQILQDFYL ELRKQSQRLN SSPITTRQLE SLIRLTEARA RLELREEATK ENSTTRP00000012236/1-821 ATQILQDFYL ELRKQSQRLN SSPITTRQLE SLIRLTEARA RLELREEATK 751 800 bmy_14747T0/1-762 EDAEDIVEIM KYSMLGTYSD EFGNLDFERS QHGSGMSNRS TAKRFISTLN ENSP00000368174/1-840 EDAEDIVEIM KYSMLGTYSD EFGNLDFERS QHGSGMSNRS TAKRFISALN ENSBTAP00000019471/1-816 EDAEDIVEIM KYSMLGTYSD EFGNLDFERS QHGSGMSNRS AAKRFISALN BACU014769/1-770 EDAEDIVEIM KYSMLGTYSD EFGNLDFERS QHGSGMSNRS TAKRFISTLN ENSTTRP00000012236/1-821 QDAEDIVEIM KYSMLGTYSD EFGNLDFERS QHGSGMSNRS TAKRFISALN 801 850 bmy_14747T0/1-762 NIAERTYNNL FQFHQLRQIA KELNIQVADF ENFIGSLNDQ GYLLKKGPKL ENSP00000368174/1-840 NVAERTYNNI FQFHQLRQIA KELNIQVADF ENFIGSLNDQ GYLLKKGPKV ENSBTAP00000019471/1-816 KIAERTYNNL FQFHQLQQIA KELNIQVADF ENFIGSLNDQ GYLLKKGPKV BACU014769/1-770 NIAERTYNNL FQFHQLRQIA KELNIQVADF ENFIGSLNDQ GYLLKKGPKI ENSTTRP00000012236/1-821 NIAERTYNNL FQFHQLRQIA KELNIQVADF ESFIGSLNDQ GYLLKKGPKV 851 900 bmy_14747T0/1-762 YQLQTM ENSP00000368174/1-840 YQLQTM ENSBTAP00000019471/1-816 YQLQTM BACU014769/1-770 YQLQTM ENSTTRP00000012236/1-821 YQLQTM