KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:57 2014 Check: 00 .. Name: BACU020413/1-657 Len: 661 Check: 4084 Weight: 1.00 Name: ENSP00000231572/1-660 Len: 661 Check: 6452 Weight: 1.00 Name: ENSBTAP00000019475/1-660 Len: 661 Check: 7069 Weight: 1.00 Name: bmy_01538T0/1-610 Len: 661 Check: 3892 Weight: 1.00 Name: ENSTTRP00000015310/1-660 Len: 661 Check: 8040 Weight: 1.00 // 1 50 BACU020413/1-657 MDGLVAHCSA RLLQQEKEIT FLTAEIDRLK NCSCSEASSN LQQLREENLK ENSP00000231572/1-660 MDVLVSECSA RLLQQEEEIK SLTAEIDRLK NCGCLGASPN LEQLQEENLK ENSBTAP00000019475/1-660 MDALVAHCSA RLLQQEKEIK FLTAEVDRLK NYSCSEASAD LEKLREENLK bmy_01538T0/1-610 ---------- -----EKEIT FLTAEIDRLK NCSCSEASSN LQQLREENLK ENSTTRP00000015310/1-660 MDGLVAHCSA RLLQQEKEIT FLTAEIDRLK NCSCSEASSN LEQLREENLK 51 100 BACU020413/1-657 LKYRLNILQK SLQAERNKPT KNMLNINSCL QEVFGCAIKA AYPDLENPPL ENSP00000231572/1-660 LKYRLNILRK SLQAERNKPT KNMINIISRL QEVFGHAIKA AYPDLENPPL ENSBTAP00000019475/1-660 LKYRLNILRK SLQAERNKPT KTMININSCL EEVFGCAIKA AYPVLENPPL bmy_01538T0/1-610 LKYRLNILQK SLQAERNKPT KNMLNINSCL QEVFGCAIKA AYPDLENPPL ENSTTRP00000015310/1-660 LKYRLNILQK SLQAERSKPT KNMLNINSCL QEVFGCAIKA AYPDLENPPL 101 150 BACU020413/1-657 IVTPSQQPKF GDYQCNSAMG ISQMLKTKEQ KVNPREIAGN IIKHLPDNEY ENSP00000231572/1-660 LVTPSQQAKF GDYQCNSAMG ISQMLKTKEQ KVNPREIAEN ITKHLPDNEC ENSBTAP00000019475/1-660 IVTPSQQPKF GDYQCNSAMG ICQMLKTKEQ KVNPREIAEN IVKHLPDNEY bmy_01538T0/1-610 IVTPSQQPKF GDYQCNSAMG ISQMLKTKEQ KVNPREIAGN IIKHLPDNEY ENSTTRP00000015310/1-660 IVTPSQQPKF GDYQCNSAMG ISQMLKTKEQ KVNPREIAGN IIKHLPDNEY 151 200 BACU020413/1-657 IENVEIAGPG FINVHLRKGF VSQQLTNLLV NGVKLPAIGE NKKVYVQFLI ENSP00000231572/1-660 IEKVEIAGPG FINVHLRKDF VSEQLTSLLV NGVQLPALGE NKKVIVDFSS ENSBTAP00000019475/1-660 IEKVEIAGPG FINIHLRKGF VSQQLTNLLV NGVKIPSIGE NKKVIVDFSS bmy_01538T0/1-610 IENVEIAGPG FINVHLRKGF VSQQLTNLLV NGVKLPAIGE NKKVVVDFSS ENSTTRP00000015310/1-660 IEKVEIAGPG FINVHLRKGF VSQQLTNLLV NGVKLPAIGE NKKVVVDFSS 201 250 BACU020413/1-657 NNTLELVLLA HSSVTILFVE IEHLFWCSKF ---LLPHSGC -GVCLGLLLR ENSP00000231572/1-660 PNIAKEMHVG HLRSTIIGES ISRLFEFAGY DVLRLNHVGD WGTQFGMLIA ENSBTAP00000019475/1-660 PNIAKEMHVG HLRSTIIGES MCRLFEFAGY NVLRLNHVGD WGTQFGMLIA bmy_01538T0/1-610 PNIAKEMHVG HLRSTIIGES MCRLFEFAGY NVLRLNHVGD WGTQFGMLIA ENSTTRP00000015310/1-660 PNIAKEMHVG HLRSTIIGES MCRLFEFAGY NVLRLNHVGD WGTQFGMLIA 251 300 BACU020413/1-657 NVQIFYLEIW GSLFTNLTFL LKKTQESKKR FDTEEEFKKR AYQCVVLLQS ENSP00000231572/1-660 HLQDKFPD-Y LTVSPPIGDL QVFYKESKKR FDTEEEFKKR AYQCVVLLQG ENSBTAP00000019475/1-660 HLQDKFPD-Y LTVSPPIGDL QAFYKESKKR FDTEEEFKKR AYQCVVLLQS bmy_01538T0/1-610 HLQDRFPD-Y LTVSPPIGDL QAFYKESKKR FDTEEEFKKR AYQCVVLLQS ENSTTRP00000015310/1-660 HLQDRFPD-Y LTVSPPIGDL QAFYKESKKR FDTEEEFKKR AYQCVVLLQS 301 350 BACU020413/1-657 KNPDIIKAWK LICDVSRQEF NKIYEALDIS LIERGESFYQ DRMNDIVKEF ENSP00000231572/1-660 KNPDITKAWK LICDVSRQEL NKIYDALDVS LIERGESFYQ DRMNDIVKEF ENSBTAP00000019475/1-660 KNPDIIKAWK LICDVSRQEF NKIYEALDIS LIERGESFYQ DRMHDIVKEF bmy_01538T0/1-610 KNPDIIKAWK LICDVSRQ-- ---------- ---------- ---------- ENSTTRP00000015310/1-660 KNPDIIKAWK LICDVSRQEF NKIYEALDIS LIERGESFYQ DMMNDIVKEF 351 400 BACU020413/1-657 EDRGFVQVDD GRKIVFVPGC SIPLTIVKSD GGYTYDTSDL AAIKQRLFEE ENSP00000231572/1-660 EDRGFVQVDD GRKIVFVPGC SIPLTIVKSD GGYTYDTSDL AAIKQRLFEE ENSBTAP00000019475/1-660 EDRGFVQVDD GRKIVFVPGC SVPLTIVKSD GGYTYDTSDL AAIKQRLFEE bmy_01538T0/1-610 ---GFVQVDD GRKIVFVPGC SIPLTIVKSD GGYTYDTSDL AAIKQRLFEE ENSTTRP00000015310/1-660 EDRGFVQVDD GRKIVFVPGC SIPLTIVKSD GGYTYDTSDL AAIKQRLFEE 401 450 BACU020413/1-657 KADIIVYVVD SGQSLHFQTT FGAAQMIGWY DPEVTRVSHA GFGVVLGEDK ENSP00000231572/1-660 KADMIIYVVD NGQSVHFQTI FAAAQMIGWY DPKVTRVFHA GFGVVLGEDK ENSBTAP00000019475/1-660 KADMIIYVVD NGQSLHFQTV FGAAQMIGWY DPAVTRVSHA GFGVVLGEDK bmy_01538T0/1-610 KADIIIYVVD SGQSLHFQTI FGAAQMIGWY DPEVTRVSHA GFGVVLGEDK ENSTTRP00000015310/1-660 KADMIIYVVD SGQSLHFQTI FGGAQMIGWY DPAVTRVSHA GFGVVLGEDK 451 500 BACU020413/1-657 KKFKTRSGET VRLMDLLEEG LKRSMDKLKE KERDKVLTTE ELKAAQTSVA ENSP00000231572/1-660 KKFKTRSGET VRLMDLLGEG LKRSMDKLKE KERDKVLTAE ELNAAQTSVA ENSBTAP00000019475/1-660 KKFKTRSGET VRLIDLLEEG LKRSMDKLKE KERDKVLTTE ELKAAQTSVA bmy_01538T0/1-610 KKFKTRSGET VRLIDLLEEG LKRSMDKLKE KERDKVLTTE ELKAAQTSVA ENSTTRP00000015310/1-660 KKFKTRSGET VRLIDLLEEG LKRSMDKLKE KERDKVLTTE ELKAAQTSVA 501 550 BACU020413/1-657 YGCIKYADLS HNRLNDYIFS FDKMLDDRGN TAAYLLYAFT RIRSIARLAS ENSP00000231572/1-660 YGCIKYADLS HNRLNDYIFS FDKMLDDRGN TAAYLLYAFT RIRSIARLAN ENSBTAP00000019475/1-660 YGCIKYADLS HNRLNDYIFS FDKMLDDRGN TAAYLLYAFT RIRSIARLAN bmy_01538T0/1-610 YGCIKYADLS HNRLNDYIFS FDKMLDDRGN TAAYLLYAFT RIRSIARLAS ENSTTRP00000015310/1-660 YGCIKYADLS HNRLNDYIFS FDKMLDDRGN TAAYLLYAFT RIRSIARLAS 551 600 BACU020413/1-657 IDEEMLQKAA RETKIILDHE KEWKLGRCIL RFPEVLQKIL DDLFLHTLCD ENSP00000231572/1-660 IDEEMLQKAA RETKILLDHE KEWKLGRCIL RFPEILQKIL DDLFLHTLCD ENSBTAP00000019475/1-660 IDEEMLRKAA HETEIILDHE KEWKLGRCIL RFPEVLQKIL DDLLLHTLCD bmy_01538T0/1-610 IDEEMLQKAA RETKIILDHE KEWKLGRCIL RFPEVLQKIL DDLFLHTLCD ENSTTRP00000015310/1-660 IDEEMLQKAA RETKIILDHE KEWKLGRCIL RFPEVLQKIL DDLFLHTLCD 601 650 BACU020413/1-657 YIYELATTFT EFYDSCYCVE KDRQTGEVLK VNMWRMLLCE AVAAVMAKGF ENSP00000231572/1-660 YIYELATAFT EFYDSCYCVE KDRQTGKILK VNMWRMLLCE AVAAVMAKGF ENSBTAP00000019475/1-660 YIYELATTFT EFYDSCYCVE KDRQSGEVLK VNMWRMLLCE AVAAVMAKGF bmy_01538T0/1-610 YIYELATTFT EFYDSCYCVE KDRQTGEVLK VNMWRMLLCE AVAAVMAKGF ENSTTRP00000015310/1-660 YIYELATTFT EFYDSCYCVE KDRQTGEVLK VNMWRMLLCE AVAAVMAKGF 651 700 BACU020413/1-657 DILGIKPVQR M ENSP00000231572/1-660 DILGIKPVQR M ENSBTAP00000019475/1-660 DILGIKPVQR M bmy_01538T0/1-610 DILGIKPVQR M ENSTTRP00000015310/1-660 DILGIKPVQR M