KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:07:58 2014 Check: 00 ..
Name: ENSTTRP00000006101/1-253 Len: 380 Check: 2964 Weight: 1.00
Name: bmy_22211T0/1-230 Len: 380 Check: 494 Weight: 1.00
Name: ENSBTAP00000019481/1-361 Len: 380 Check: 4874 Weight: 1.00
Name: ENSP00000261980/1-361 Len: 380 Check: 4744 Weight: 1.00
Name: BACU010806/1-380 Len: 380 Check: 5597 Weight: 1.00
//
1 50
ENSTTRP00000006101/1-253 MTGKAGEALS KPKAETVAKS TSGGAPGRCT GFGIQEILGL NKEPPSSHPR
bmy_22211T0/1-230 ---------- ---------- ---------- ---------- MKSP------
ENSBTAP00000019481/1-361 MTGKAGEALN KPKAETVAKS TSGSAPARCT GFGIQEILGL NKEPPSSHPR
ENSP00000261980/1-361 MTGKAGEALS KPKSETVAKS TSGGAPARCT GFGIQEILGL NKEPPSSHPR
BACU010806/1-380 MKGKAGEALS KPKAETVAKS TSGGAPGRCT GFGIQEILGL NKEPPSSHPR
51 100
ENSTTRP00000006101/1-253 APLDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYAQ PTFLEVLSDP
bmy_22211T0/1-230 --------G- -LPESTLTSP AGT------- ---------- ----------
ENSBTAP00000019481/1-361 ATLDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYAQ PTFLEVLSDP
ENSP00000261980/1-361 AALDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYTQ PTFLEVLSDP
BACU010806/1-380 AALDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYAQ PTFLEVLSDP
101 150
ENSTTRP00000006101/1-253 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR
bmy_22211T0/1-230 --------AL ASAVLDLY-- ---------- ---------- ----------
ENSBTAP00000019481/1-361 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR
ENSP00000261980/1-361 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR
BACU010806/1-380 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR
151 200
ENSTTRP00000006101/1-253 HXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD RIQVWFQNRR
bmy_22211T0/1-230 --LILDTLSL EE-------- ---------- -------PQG YFGVWFQNRR
ENSBTAP00000019481/1-361 HRTIFTSYQL EELEKAFNEA HYPDVYAREM LAMKTELPED RIQVWFQNRR
ENSP00000261980/1-361 HRTIFTSYQL EELEKAFNEA HYPDVYAREM LAMKTELPED RIQVWFQNRR
BACU010806/1-380 HRTIFTSYQL EELEKAFNEA HYPDVYAREM LAMKTELPED RIQVWFQNRR
201 250
ENSTTRP00000006101/1-253 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP
bmy_22211T0/1-230 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP
ENSBTAP00000019481/1-361 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP
ENSP00000261980/1-361 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP
BACU010806/1-380 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP
251 300
ENSTTRP00000006101/1-253 WLL------- ---------- ---------- ---------- ----------
bmy_22211T0/1-230 WLLVQDGFPR RFSKPEYQQF FLGMHKKSLE AAAESGRKPE AERQALPKLD
ENSBTAP00000019481/1-361 WL-------- ---------- -LGMHKKSLE AAAESGRKPE AERQALPKLN
ENSP00000261980/1-361 WL-------- ---------- -LGMHKKSLE AAAESGRKPE GERQALPKLD
BACU010806/1-380 WLLVQDGFPR RFSKPEYQQF FLGMHKKSLE AAAESGRKPE AERQALPKLD
301 350
ENSTTRP00000006101/1-253 ---------- ---------- ---------- ---------- ----------
bmy_22211T0/1-230 KMEPEERGPD PPAAMSQEEL RENSIAALRA RAQEHSTKVL RTVSGPDSLA
ENSBTAP00000019481/1-361 KTEPEERGTE PPAAMSQEEL RENSIAALRA RAQEHSTKVL GTVSGPDGLV
ENSP00000261980/1-361 KMEQDERGPD AQAAISQEEL RENSIAVLRA KAQEHSTKVL GTVSGPDSLA
BACU010806/1-380 KMEPEERGPD PPAAMSQEEL RENSIAALRA RAQEHSTKVL GTVSGPDSLA
351 400
ENSTTRP00000006101/1-253 ---------- ---------- ----------
bmy_22211T0/1-230 RNGEEPAPEE ATDEDRPAEK LSPPQLEDMA
ENSBTAP00000019481/1-361 RGAEEPEREE AADEDRPAER LSPARLEDVA
ENSP00000261980/1-361 RSTEKPEEEE AMDEDRPAER LSPPQLEDMA
BACU010806/1-380 RNGEEPAREE ATDEDRPAEK LSPPQLEDMA