KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:58 2014 Check: 00 .. Name: ENSTTRP00000006101/1-253 Len: 380 Check: 2964 Weight: 1.00 Name: bmy_22211T0/1-230 Len: 380 Check: 494 Weight: 1.00 Name: ENSBTAP00000019481/1-361 Len: 380 Check: 4874 Weight: 1.00 Name: ENSP00000261980/1-361 Len: 380 Check: 4744 Weight: 1.00 Name: BACU010806/1-380 Len: 380 Check: 5597 Weight: 1.00 // 1 50 ENSTTRP00000006101/1-253 MTGKAGEALS KPKAETVAKS TSGGAPGRCT GFGIQEILGL NKEPPSSHPR bmy_22211T0/1-230 ---------- ---------- ---------- ---------- MKSP------ ENSBTAP00000019481/1-361 MTGKAGEALN KPKAETVAKS TSGSAPARCT GFGIQEILGL NKEPPSSHPR ENSP00000261980/1-361 MTGKAGEALS KPKSETVAKS TSGGAPARCT GFGIQEILGL NKEPPSSHPR BACU010806/1-380 MKGKAGEALS KPKAETVAKS TSGGAPGRCT GFGIQEILGL NKEPPSSHPR 51 100 ENSTTRP00000006101/1-253 APLDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYAQ PTFLEVLSDP bmy_22211T0/1-230 --------G- -LPESTLTSP AGT------- ---------- ---------- ENSBTAP00000019481/1-361 ATLDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYAQ PTFLEVLSDP ENSP00000261980/1-361 AALDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYTQ PTFLEVLSDP BACU010806/1-380 AALDGLAPGH LLAARSVLSP AGVGGMGLLG PGGLPGFYAQ PTFLEVLSDP 101 150 ENSTTRP00000006101/1-253 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR bmy_22211T0/1-230 --------AL ASAVLDLY-- ---------- ---------- ---------- ENSBTAP00000019481/1-361 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR ENSP00000261980/1-361 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR BACU010806/1-380 QSVHLQPLGR ASGPLDTSQT ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR 151 200 ENSTTRP00000006101/1-253 HXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD RIQVWFQNRR bmy_22211T0/1-230 --LILDTLSL EE-------- ---------- -------PQG YFGVWFQNRR ENSBTAP00000019481/1-361 HRTIFTSYQL EELEKAFNEA HYPDVYAREM LAMKTELPED RIQVWFQNRR ENSP00000261980/1-361 HRTIFTSYQL EELEKAFNEA HYPDVYAREM LAMKTELPED RIQVWFQNRR BACU010806/1-380 HRTIFTSYQL EELEKAFNEA HYPDVYAREM LAMKTELPED RIQVWFQNRR 201 250 ENSTTRP00000006101/1-253 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP bmy_22211T0/1-230 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP ENSBTAP00000019481/1-361 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP ENSP00000261980/1-361 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP BACU010806/1-380 AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA KDGIMDSCAP 251 300 ENSTTRP00000006101/1-253 WLL------- ---------- ---------- ---------- ---------- bmy_22211T0/1-230 WLLVQDGFPR RFSKPEYQQF FLGMHKKSLE AAAESGRKPE AERQALPKLD ENSBTAP00000019481/1-361 WL-------- ---------- -LGMHKKSLE AAAESGRKPE AERQALPKLN ENSP00000261980/1-361 WL-------- ---------- -LGMHKKSLE AAAESGRKPE GERQALPKLD BACU010806/1-380 WLLVQDGFPR RFSKPEYQQF FLGMHKKSLE AAAESGRKPE AERQALPKLD 301 350 ENSTTRP00000006101/1-253 ---------- ---------- ---------- ---------- ---------- bmy_22211T0/1-230 KMEPEERGPD PPAAMSQEEL RENSIAALRA RAQEHSTKVL RTVSGPDSLA ENSBTAP00000019481/1-361 KTEPEERGTE PPAAMSQEEL RENSIAALRA RAQEHSTKVL GTVSGPDGLV ENSP00000261980/1-361 KMEQDERGPD AQAAISQEEL RENSIAVLRA KAQEHSTKVL GTVSGPDSLA BACU010806/1-380 KMEPEERGPD PPAAMSQEEL RENSIAALRA RAQEHSTKVL GTVSGPDSLA 351 400 ENSTTRP00000006101/1-253 ---------- ---------- ---------- bmy_22211T0/1-230 RNGEEPAPEE ATDEDRPAEK LSPPQLEDMA ENSBTAP00000019481/1-361 RGAEEPEREE AADEDRPAER LSPARLEDVA ENSP00000261980/1-361 RSTEKPEEEE AMDEDRPAER LSPPQLEDMA BACU010806/1-380 RNGEEPAREE ATDEDRPAEK LSPPQLEDMA