KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:58 2014 Check: 00 .. Name: ENSP00000349396/1-606 Len: 681 Check: 2451 Weight: 1.00 Name: ENSBTAP00000019482/1-606 Len: 681 Check: 959 Weight: 1.00 Name: ENSTTRP00000006105/1-605 Len: 681 Check: 118 Weight: 1.00 Name: bmy_10181T0/1-312 Len: 681 Check: 7935 Weight: 1.00 Name: BACU010807/1-609 Len: 681 Check: 765 Weight: 1.00 // 1 50 ENSP00000349396/1-606 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019482/1-606 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006105/1-605 ---------- ---------- ---------- ---------- ---------- bmy_10181T0/1-312 APGQQTQHCG SFREVGRFRE RLRLPAPSSL SARLCGSRVP GPRPSSAAAS BACU010807/1-609 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000349396/1-606 ---------- ---------- --MAVAGPAP GAGARPRLDL QFLQRFLQIL ENSBTAP00000019482/1-606 ---------- ---------- --MAIRGPGP RPGGRPRLDL QFLQRFLQIQ ENSTTRP00000006105/1-605 ---------- ---------- --MAVRGPAP RASARPRLDL QFFERFLQIQ bmy_10181T0/1-312 SSDSTLRGPG GYRAPASVRS RVMAVRGPAP RAGARPRLDL QFFQRFLQIQ BACU010807/1-609 ---------- ---------- --MAVRGPAP RAGARPRLDL QFFQRFLQIQ 101 150 ENSP00000349396/1-606 KVLFPSWSSQ NALMFLTLLC LTLLEQFVIY QVGLIPSQYY GVLGNKDLEG ENSBTAP00000019482/1-606 KVLFPSWSSQ SALMFLTLLC VALLEQLVIY QVGLIPSQYF GVLGNKDLNG ENSTTRP00000006105/1-605 KVLFPSWSSQ NALMFLTLLC VALLEQLVIY RVGLIPSQYF GVLGNKDLNG bmy_10181T0/1-312 KVLFPSWSSQ NALMFLTLLC VALLEQLVIY RVGLIPSQYF GVLGNKDLNG BACU010807/1-609 KVLFPSWSSQ NALMFLTLLC VALLEQLVIY RVGLIPSQYF GVLGNKDLNG 151 200 ENSP00000349396/1-606 FKTLTFLAVM LIVLNSTLKS FDQFTCNLLY VSWRKDLTEH LHRLYFRGRA ENSBTAP00000019482/1-606 FKTLTFLSVV LIVLQSMLKS FDQFTCNLLY VSWRKDLTEH LHRLYFRGRV ENSTTRP00000006105/1-605 FKTLTFLAVV LIVLNSMLKS FDQFTCNLLY VSWRKDLTEH LHRLYFRGRV bmy_10181T0/1-312 FKTLTFLAVV LIVLNSMLKS FDQFTCNLLY VSWRKDLTEH LHRLYFRGRV BACU010807/1-609 FKTLTFLAVV LIVLNSMLKS FDQFTCNLLY VSWRKDLTEH LHRLYFRGRV 201 250 ENSP00000349396/1-606 YYTLNVLRDD IDNPDQRISQ DVERFCRQLS SMASKLIISP FTLVYYTYQC ENSBTAP00000019482/1-606 YYTLNVLRDD VDNPDQRISQ DVERFCRQLS SMASKLIISP FTLVYYTYQC ENSTTRP00000006105/1-605 YYTLNVLRDD IDNPDQRISQ DVERFCRQLS SVASKLIVSP FTLIYYTYQC bmy_10181T0/1-312 YYTLNVLRDD IDNPDQRISQ DVERFCRQLS SMASKLIISP FTLVYYTYQC BACU010807/1-609 YYTLNVLRDD IDNPDQRISQ DVERFCRQLS SMASKLIISP FTLVYYTYQC 251 300 ENSP00000349396/1-606 FQSTGWLGPV SIFGYFILGT VVNKTLMGPI VMKLVHQEKL EGDFRFKHMQ ENSBTAP00000019482/1-606 FRSTSWLGPV SIFGYFILGT VVNRVVMGPI VAKLVQQEKL EGDFRFKHMQ ENSTTRP00000006105/1-605 FQSTGWLGPV SIFGYFILGT VVNKMLMGPI VAKLVQHEKL EGDFRFKHMQ bmy_10181T0/1-312 FQSTGWLGPV SIFGYFILGT VVNKMLMGPI VAKLVQQEKL EGDFRFKHMQ BACU010807/1-609 FQSTGWLGPV SIFGYFILGT VVNKMLMGPI VAKLVQQEKL EGDFRFKHVQ 301 350 ENSP00000349396/1-606 IRVNAEPAAF YRAGHVEHMR TDRRLQRLLQ TQRELMSKEL WLYIGINTFD ENSBTAP00000019482/1-606 IRVNAEPAAF FRAGHVEHMR TDRRLQRLLK TQRELMSKEL WLYIGINMFD ENSTTRP00000006105/1-605 IRVNAEPAAF FRAGHVEHMR TDRRLQRLLQ TQRELMSKEL WLYIGVNMFD bmy_10181T0/1-312 IRVNAEPAAF FR-------- ---------- ---------- ---------- BACU010807/1-609 IRVNAEAAAF FRAGHVEHMR TDCRLQRLLQ TQRELMSKEL WLYIGVNMFD 351 400 ENSP00000349396/1-606 YLGSILSYVV IAIPIFSGVY GDLSPAELST LVSKNAFVCI YLISCFTQLI ENSBTAP00000019482/1-606 YLGSILSYIV IAIPIFSGVY GDLSPTELSS LVSKNAFVCM YLINCFSQLI ENSTTRP00000006105/1-605 YLGSILSYVV ISIPIFSGVY RDLSPTELST LVSKNAFVCM YLISCFTRLI bmy_10181T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU010807/1-609 YLGSILSYVV ISIPIFNGIY GDLSPTELST LVSKNAFVCM YLISCFTRLI 401 450 ENSP00000349396/1-606 DLSTTLSDVA GYTHRIGQLR ETLLDMSLKS QDCEILGESE WGLDTPPGWP ENSBTAP00000019482/1-606 DLCTTLSDVA GYTHRIGELQ ETLLDMTLKS QDGEFLDESQ WDLARGPGGP ENSTTRP00000006105/1-605 DLSTTLSDVA GYTHRIGELQ ETLLDMTLKS RDGEILDESE WDLARTPGWP bmy_10181T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU010807/1-609 DLSTTLSDVA GYTHRIGELQ ETLLDMTLKS QDGEILDESE WDLARAPGWP 451 500 ENSP00000349396/1-606 AAEPADTAFL LERVSISAPS SDKPLIKDLS LKISEGQSLL ITGNTGTGKT ENSBTAP00000019482/1-606 ATEPADTAFL LERVCICAPS SHKPLIKDLS LKISEGQSLL ITGNTGTGKT ENSTTRP00000006105/1-605 ATERTDTAFL LERVCISAPS SNKPLIKDLS LKISEGQSLL ITGNTGTGKT bmy_10181T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU010807/1-609 ATERTDTAFL LERVCISAPS SNKPLIKDLS LKISEGQSLL ITGNTGTGKT 501 550 ENSP00000349396/1-606 SLLRVLGGLW TSTRGSVQML TDFGPHGVLF LPQKPFFTDG TLREQVIYPL ENSBTAP00000019482/1-606 SLLRVLGGLW ASARGSVQML ADFGPHGVLF LPQKPFFTDG TLREQVIYPL ENSTTRP00000006105/1-605 SLLRVLGGLW ASTAGSVQML MDFGPHGVLF LPQKPFFTDG TLREQVIYPL bmy_10181T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU010807/1-609 SLLRVLGGLW ASTWGSVQML TDFGPHGVLF LPQKPFFTDG TLREQVIYPL 551 600 ENSP00000349396/1-606 KEVYPDSGSA DDERILRFLE LAGLSNLVAR TEGLDQQVDW NWYDVLSPGE ENSBTAP00000019482/1-606 KEIYPDSGST DDERIMRFLE LAGLSSLVAR TEGLDQQVDW NWYDVLSPGE ENSTTRP00000006105/1-605 KEIYPDSGSA DDERIMRFLE LAGLSSLVAR TEGLDQQVDW NWYDVLSPGE bmy_10181T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU010807/1-609 KEIYPDSGAA DDERIVRFLE LAGLSSLVAR TEGLDQQVDW NWYDVLSPGE 601 650 ENSP00000349396/1-606 MQRLSFARLF YLQPKYAVLD EATSALTEEV ESELYRIGQQ LGMTFISVGH ENSBTAP00000019482/1-606 MQRLSFARLF YLQPKYAVLD EATSALTEEV ESELYRVGQQ LGMTFISVGH ENSTTRP00000006105/1-605 MQRLSFARLF YLQPKYAVLD EATSALTEEV ESELYRIGQQ LGMTFVSVGH bmy_10181T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU010807/1-609 MQRLSFARLF YLQPKYAVLD EATSALTEEV ESELYRIGQQ LGMTFISVGH 651 700 ENSP00000349396/1-606 RQSLEKFHSL VL---KLCGG GRWELMRIKV E ENSBTAP00000019482/1-606 RRSLEKFHSL VL---RLCGD GRWELTRIKV E ENSTTRP00000006105/1-605 RRSLEKFHSL VL----LCGE GRWELTRIKV E bmy_10181T0/1-312 ---------- ---------- ---------- - BACU010807/1-609 RRSLEKGFSI GLSDFQFQMT LPFPFVAVFE L