KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:10 2014 Check: 00 .. Name: ENSP00000360541/1-658 Len: 661 Check: 7325 Weight: 1.00 Name: bmy_15165T0/1-614 Len: 661 Check: 1769 Weight: 1.00 Name: ENSBTAP00000019505/1-658 Len: 661 Check: 7065 Weight: 1.00 Name: BACU000255/1-658 Len: 661 Check: 4179 Weight: 1.00 Name: ENSTTRP00000000971/1-658 Len: 661 Check: 1626 Weight: 1.00 // 1 50 ENSP00000360541/1-658 ---MVPRLLL RAWPRGPAVG PGAPSRPLSA GSGPGQYLQR SIVPTMHYQD bmy_15165T0/1-614 MSLRYQNKVL RKYASRHS-- PGVFISLWTC NF-----IAI AVIGNPPVEN ENSBTAP00000019505/1-658 ---MVARLLL RSWSRGLAVG PGAPCRPLST GFEPSQYLQR SIVPTMHYQD BACU000255/1-658 ---MVAGLLL RAWPRGLAFG PGAPSRLLST SFDPGQYLQL SIVPTMHYQD ENSTTRP00000000971/1-658 ---MVAGLLL RAWPRGFAFG PGALSRPLST GFDPGQYLQL SIVPTMHYQD 51 100 ENSP00000360541/1-658 SLPRLPIPKL EDTIRRYLSA QKPLLNDGQF RKTEQFCKSF ENGIGKELHE bmy_15165T0/1-614 D--ELPIPKL EDTTRRYLSA QKPLLDDGQF RLA------- ----GTSHLQ ENSBTAP00000019505/1-658 SLPRLPIPKL EDTIRRYLSA QKPLLDDSQF RKTEQLCKSF ETGIGKELHE BACU000255/1-658 SLPRLPIPKL EDTIRRYLSA QKPLLDDGQF RKTEQLCKSF ENGIGKELHK ENSTTRP00000000971/1-658 SLPRLPIPKL EDTVRRYLSA QKPLLDDGQF RKTEQLCKSF ENGIGKELHK 101 150 ENSP00000360541/1-658 QLVALDKQNK HTSYISGPWF DMYLSARDSV VLNFNPFMAF NPDPKSEYND bmy_15165T0/1-614 RACAL----- ------GPWF DMYLTARDPI VLNFNPFMSF NPDPKSEYND ENSBTAP00000019505/1-658 QLVTQDKQNK HTSYISGPWF DMYLTARDPV VLNFNPFISF NPDPKSEYND BACU000255/1-658 QLVAQDKQNK HTSYISGPWF DMYLTARDPI VLNFNPFMSF NPDPKSEYND ENSTTRP00000000971/1-658 QLVAQDKQNK HTSYISGPWF DMYLTARDPV VLNFNPFMSF NPDPKSEYND 151 200 ENSP00000360541/1-658 QLTRATNMTV SAIRFLKTLR AGLLEPEVFH LNPAKSDTIT FKRLIRFVPS bmy_15165T0/1-614 QLTRATNMTV SAVRFLKTLR ADLLEPEVFH LNPAKSDTDT FKRLIRFVPS ENSBTAP00000019505/1-658 QLTRATNMTV SAIRFLKTLR ADLLEPEVFH LNPAKSDTDT FKRFIRFVPS BACU000255/1-658 QLTRATNLTV SAVRFLKTLR ADLLEPEVFH LNPAKSDTDT FKRLIRFVPS ENSTTRP00000000971/1-658 QLTRATNMTV SAIRFLKTLR ADLLEPEVFH LNPAKSDTDT FKRLIRFVPS 201 250 ENSP00000360541/1-658 SLSWYGAYLV NAYPLDMSQY FRLFNSTRLP KPSRDELFTD DKARHLLVLR bmy_15165T0/1-614 SLSWYGAYLV NAYPLDMSQY FRLFNSTRLP KPSRDELFTD DKARHLLVLR ENSBTAP00000019505/1-658 FLSWYGAYLV NAYPLDMSQY YRLFNSTRLP RPHRDELFTD DKARHLLVLR BACU000255/1-658 SLSWYGAYLV NAYPLDMSQY FRLFNSTRLP KPSRDELFTD DKARHLLVLR ENSTTRP00000000971/1-658 SLSWYGAYLV NAYPLDMSQY FRLFNSTRLP KPSRDELFTD DKARHLLVLR 251 300 ENSP00000360541/1-658 KGNFYIFDVL DQDGNIVSPS EIQAHLKYIL SDSSPAPEFP LAYLTSENRD bmy_15165T0/1-614 KGHFYVFDVL DQDGNIVSAS EIQAHLKYIL SDDSLAPEFP LSYLTSENRD ENSBTAP00000019505/1-658 KGHFYIFDVL DQDGNIVSAS EIQAHLKYIL SDNSPAPEFP LSYLTSENRD BACU000255/1-658 RGHFYVFDVL DQDGNIVSAS EIQAHLKYIL SDNSLAPEFP LSYLTSENRD ENSTTRP00000000971/1-658 KGHFYVFDVL DQNGNIVSAS EIQAHLKYIL SDSSLAPEFP LSYLTSENRD 301 350 ENSP00000360541/1-658 IWAELRQKLM SSGNEESLRK VDSAVFCLCL DDFPIKDLVH LSHNMLHGDG bmy_15165T0/1-614 IWAELRQKLV SGGNEEALRK VDSAVFCLCL DDFPIKDLVH LSHNMLHGDG ENSBTAP00000019505/1-658 IWAELRQKLV SGGNEATLGK VDSAVFCLCL DDFPIRDFVH LSHSMLHGDG BACU000255/1-658 IWAELRQKLV SGGNEEALRK VDSAVFCLCL DDFPIKDLVH LSHNMLHGDG ENSTTRP00000000971/1-658 IWAELRQKLV SGGNEETLRK VDSAVFCLCL DDFPIKDLVH LSHNMLHGDG 351 400 ENSP00000360541/1-658 TNRWFDKSFN LIIAKDGSTA VHFEHSWGDG VAVLRFFNEV FKDSTQTPAV bmy_15165T0/1-614 TNRWFDKSFN LIIAKDGTAA VHFEHAWGDG VAVLRFFNEV FKDSTQAPAV ENSBTAP00000019505/1-658 TNRWFDKSFN LIIAKDGTAA IHFEHAWGDG VAVLRFFNEV FKDSTQAPAI BACU000255/1-658 TNRWFDKSFN LIIAKDGTAA VHFEHAWGDG VAVLRFFNEV FKDSTQAPAV ENSTTRP00000000971/1-658 TNRWFDKSFN LIIAKDGTAA IHFEHAWGDG VAVLRFFNEV FKDSTQAPAI 401 450 ENSP00000360541/1-658 TPQSQPATTD STVTVQKLNF ELTDALKTGI TAAKEKFDAT MKTLTIDCVQ bmy_15165T0/1-614 TPRSQPANTD SSVAVQKLNF KLNDALKTGI SAAKEKFDAT MKTLTIDYIQ ENSBTAP00000019505/1-658 TPQSQPASTD SSVAVQKLNF KLSDALKTGI SAAKEKFDAT VKSLTIDYIR BACU000255/1-658 TPRSQPANTD SSVAVQKLNF KLNDALKTGI STAKEKFDAT MKTLTIDYIQ ENSTTRP00000000971/1-658 TPRSQPANTD SSVAVQKLNF KLNDALKTGI SAAKEKFDAT MKTLTIDYIQ 451 500 ENSP00000360541/1-658 FQRGGKEFLK KQKLSPDAVA QLAFQMAFLR QYGQTVATYE SCSTAAFKHG bmy_15165T0/1-614 FQRGGKEFLK KQKLSPDSVA QLGFQMAFLQ QYGQTVATYE SCSTAAFKHG ENSBTAP00000019505/1-658 FQRGGREFLK KQKLSPDSMA QLAFQMAFLR QYGQTVATYE SCSTAAFKHG BACU000255/1-658 FQRGGKEFLK KQKLSPDSVA QLGFQMAFLQ QYGQTVATYE SCSTAAFKHG ENSTTRP00000000971/1-658 FQRGGKEFLK KQKLSPDSVA QLAFQMALLQ QYGQTVATYE SCSTAAFKHG 501 550 ENSP00000360541/1-658 RTETIRPASV YTKRCSEAFV REPSRHSAGE LQQMMVECSK YHGQLTKEAA bmy_15165T0/1-614 RTETIRPASI FTKRCSEAFV REPSKHSAGE LQQMMARCST YHNQLTKEAA ENSBTAP00000019505/1-658 RTETIRPASI FTKTCSVAFV REPSKYSAGE LQQMMAKCST YHNQLTREAA BACU000255/1-658 RTETIRPASV FTKRCSEAFV REPSKHSAGE LQQMMAKCST YHNQLTKEAA ENSTTRP00000000971/1-658 RTETIRPASI FTKRCSEAFV REPSKHSAGE LQQMIAKCST YHNQLTKEAA 551 600 ENSP00000360541/1-658 MGQGFDRHLF ALRHLAAAKG IILPELYLDP AYGQINHNVL STSTLSSPAV bmy_15165T0/1-614 M--------- -------AKG IDLPELYLDP AYRQINHNIL STSTLSSPAV ENSBTAP00000019505/1-658 MGQGFDRHLF ALRYLAAARG ISMPELFLDP AYRQINHNIL STSTLSSPAV BACU000255/1-658 MGQGFDRHLF ALRYLGAAKG IDLPELYLDP AYRQINHNIL STSTLSSPAV ENSTTRP00000000971/1-658 MGQGFDRHLF ALRYLGAAKG IDLPELYLDP AYRQINHNIL STSTLSSPAV 601 650 ENSP00000360541/1-658 NLGGFAPVVS DGFGVGYAVH DNWIGCNVSS YPGRNAREFL QCVEKALEDM bmy_15165T0/1-614 NIGGFAPVVP DGFGIAYAVH DNWIGCNVSA YQGRNAHEFL QCVEKALESM ENSBTAP00000019505/1-658 NIGCFAPVVP DGFGIGYSVQ DNWIGCNVSA YQSRNAREFL QCVEKALEDM BACU000255/1-658 NIGGFAPVVP DGFGIAYAVH DNWIGCNVSA YQGRNAHEFL QCVEKALESV ENSTTRP00000000971/1-658 NIGGFAPVVP DGFGIAYAVH DNWIGCNVSA YQGRNAHEFL QCVEKALEGM 651 700 ENSP00000360541/1-658 FDALEGKSIK S bmy_15165T0/1-614 FDALEGKAIK S ENSBTAP00000019505/1-658 FDALEGKMIK T BACU000255/1-658 FDALEGKAIK S ENSTTRP00000000971/1-658 FDALEGKAIK S