KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:08:10 2014  Check: 00 ..

 Name: bmy_12576T0/1-187         Len:    202  Check:  2425  Weight:  1.00
 Name: ENSP00000299140/1-167     Len:    202  Check:  3897  Weight:  1.00
 Name: ENSBTAP00000019506/1-154  Len:    202  Check:  8082  Weight:  1.00
 Name: ENSTTRP00000012244/1-85   Len:    202  Check:  1391  Weight:  1.00
 Name: BACU010147/1-107          Len:    202  Check:  5770  Weight:  1.00

//


                          1                                                   50
bmy_12576T0/1-187         MIITTWIVYI LARKGAGFPF PPKVSSDVEV VESEAVSVVQ HWLKKTEEEA 
ENSP00000299140/1-167     MIITTWIVYI LARKGVGLPF LPITSSDIDV VESEAVSVLH HWLKKTEEEA 
ENSBTAP00000019506/1-154  MIITTWIVYI LARKGAGLPF PPKVSSDVEV TETEAVSVVQ HWLKKTEEEA 
ENSTTRP00000012244/1-85   ---------- ---------- ---------- ---------- -----TEEEA 
BACU010147/1-107          MIITTWIVYI LARKGAGFPF PPKVSSDVEV VESEAVSVVQ HWLKKTEEEA 


                          51                                                 100
bmy_12576T0/1-187         ---------- ---SQDIKEK MSTNCPPTHG QDVHVTRDVV MEPLSCPSWG 
ENSP00000299140/1-167     SRGIKEKLSI NHPSQGVREK MSTDSPPTHG QDIHVTRDVV KHHLS----- 
ENSBTAP00000019506/1-154  ---------- ---SQEIKEK MSTNFPPMQG QDVHVTRDVV KHHLS----- 
ENSTTRP00000012244/1-85   ---------- ---SQDINE- MST-CPPTHG QDVHVTRDEV KHHLS----- 
BACU010147/1-107          ---------- ---SQDIKEK MSTNCPPTRG QDVHVTRDVV KHHLS----- 


                          101                                                150
bmy_12576T0/1-187         RGEGRGRGRR VLPQRVLGKW AELVQAGLHA GRGVLAGHRE GTREPQRLMV 
ENSP00000299140/1-167     ---------- ---------- ---------- KSDLLANQSQ EVLEERTRIQ 
ENSBTAP00000019506/1-154  ---------- ---------- ---------- KSGLLANQSQ EVLEERTRIQ 
ENSTTRP00000012244/1-85   ---------- ---------- ---------- KSGLLTNQSQ EVLEERTRIQ 
BACU010147/1-107          ---------- ---------- ---------- KSDLLTNQSQ EVLEERTRIQ 


                          151                                                200
bmy_12576T0/1-187         FC--SHTRIF QVPSEVRNDA MRERIEQVRR SISHLTDEAS QELHKRNSYS 
ENSP00000299140/1-167     FIRWSHTRIF QVPSEMTEDI MRDRIEQVRR SISRLTDVSA QDFSMRPSSS 
ENSBTAP00000019506/1-154  FIRWSHTRIF QVPSEARNEA MRDRIEQVRR SICHLSDEIS QELRNRNSYS 
ENSTTRP00000012244/1-85   FIRWSPYRIF QVRSEVRKMA MRERIEQVKP ---------- ---------- 
BACU010147/1-107          FIRWR----- ---------- ---------- ---------- ---------- 


                          201                                                250
bmy_12576T0/1-187         DC 
ENSP00000299140/1-167     DC 
ENSBTAP00000019506/1-154  EC 
ENSTTRP00000012244/1-85   -- 
BACU010147/1-107          --