KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:12 2014 Check: 00 .. Name: ENSP00000309945/1-528 Len: 528 Check: 6793 Weight: 1.00 Name: ENSBTAP00000019510/1-528 Len: 528 Check: 6537 Weight: 1.00 Name: ENSTTRP00000007494/1-528 Len: 528 Check: 5677 Weight: 1.00 Name: bmy_00802T0/1-476 Len: 528 Check: 3147 Weight: 1.00 Name: BACU011893/1-495 Len: 528 Check: 6964 Weight: 1.00 // 1 50 ENSP00000309945/1-528 MAGSDTAPFL SQADDPDDGP VPGTPGLPGS TGNPKSEEPE VPDQEGLQRI ENSBTAP00000019510/1-528 MSGSDTAPFL SQADDTDDGP APGTPGLPGS MGNPKSEDPA VPDQEGLQRI ENSTTRP00000007494/1-528 MSGSDTAPFL SQADDTDDGP APGTPGLPGS MGNPKSEDPE VPDREGLQRI bmy_00802T0/1-476 MSGSDTAPFL SQADDTDDGP APGNPGLPES MGNPKSEDPE VPDREGLQRI BACU011893/1-495 MSGSDTAPFL SQADDTDDGP APGTPGLPGS MGTPKSEDPE VPDREGLQRI 51 100 ENSP00000309945/1-528 TGLSPGRSAL IVAVLCYINL LNYMDRFTVA GVLPDIEQFF NIGDSSSGLI ENSBTAP00000019510/1-528 TGLSSGHSAL IVAVLCYINL LNYMDRFTVA GVLPDIEQFF DIGDGSSGLI ENSTTRP00000007494/1-528 TGLSSGRSAL IVAVLCYINL LNYMDRFTVA GVLPDIEQFF DIGDSSSGLI bmy_00802T0/1-476 TGLSSGRSAL IVAVLCYINL LNYMDRFTVA GVLPDIEQFF DIGDSSSGLI BACU011893/1-495 TGLSSGRSAL IVAVLCYINL LNYMDRFTVA GVLPDIEQFF DIGDSSSGLI 101 150 ENSP00000309945/1-528 QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPGEHF ENSBTAP00000019510/1-528 QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPRERF ENSTTRP00000007494/1-528 QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPRERF bmy_00802T0/1-476 QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPRERF BACU011893/1-495 QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPRERF 151 200 ENSP00000309945/1-528 WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSI FYFAIPVGSG ENSBTAP00000019510/1-528 WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSV FYFAIPVGSG ENSTTRP00000007494/1-528 WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSV FYFAIPVGSG bmy_00802T0/1-476 WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSV FYFAIPVGSG BACU011893/1-495 WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSV FYFAIPVGSG 201 250 ENSP00000309945/1-528 LGYIAGSKVK DMAGDWHWAL RVTPGLGVVA VLLLFLVVRE PPRGAVERHS ENSBTAP00000019510/1-528 LGYIAGSKVK DVAGDWHWAL RVTPGLGVLA VVLLFLVVQE PPRGAVERHS ENSTTRP00000007494/1-528 LGYIAGSKVK DVAGDWHWAL RVTPGLGVLA VVLLFLVVRE PPRGAVERHS bmy_00802T0/1-476 LGYIAGSKVK DAAGDWHWAL RVTPGLGVVA VVLLFLVVRE PPRGAVERHS BACU011893/1-495 LGYIAGSKVK DAAGDWHWAL RVTPGLGVVA VVLLFLVVRE PPRGAVERHS 251 300 ENSP00000309945/1-528 DLPPLNPTSW WADLRALARN PSFVLSSLGF TAVAFVTGSL ALWAPAFLLR ENSBTAP00000019510/1-528 DSPPLNPTSW WADLRALARN PSFILSSLGF TAVAFVTGSL ALWAPAFLLR ENSTTRP00000007494/1-528 HSPPLNPTSW WEDLRALARN PSFILSSLGF TAVAFVTGSL ALWAPAFLLR bmy_00802T0/1-476 DSPPLNPTSW WADLRALARN ---------- ---------- ---------- BACU011893/1-495 DSPPLNPTSW WADLRALARN PSFILSSLGF TAVAFVTGSL ALWAPAFLLR 301 350 ENSP00000309945/1-528 SRVVLGETPP CLPGDSCSSS DSLIFGLITC LTGVLGVGLG VEISRRLRHS ENSBTAP00000019510/1-528 SRVVLGETPP CLPGDSCSSS DSLIFGLITC LTGVLGVGLG VEISRRLRRT ENSTTRP00000007494/1-528 SRVVLGETPP CLPGDSCSSS DSLIFGLITC LTGVLGVGLG VEISRRLRRS bmy_00802T0/1-476 ---------- ---------- --LIFGLITC LTGVLGVGLG VEISHRLRRS BACU011893/1-495 SRVVLGETPP CLPGDSCSSS DSLIFGLITC LTGVLGVGLG VEISRRLRRS 351 400 ENSP00000309945/1-528 NPRADPLVCA TGLLGSAPFL FLSLACARGS IVATYIFIFI GETLLSMNWA ENSBTAP00000019510/1-528 NPRADPLVCA AGLLGSAPFL FLALACARGS IVATYIFIFI GETLLSMNWA ENSTTRP00000007494/1-528 NPRADPLVCA AGLLGSSPFL FLSLACARGS IVATYIFIFI GETLLSMNWA bmy_00802T0/1-476 NPRADPLVCA AGLLGSSPFL FLSLACARGS IVATYIFIFI GETLLSMNWA BACU011893/1-495 NPRADPLVCA AGLLGSSPFL FLSLACAHGS IVATYIFIFI GETLLSMNWA 401 450 ENSP00000309945/1-528 IVADILLYVV IPTRRSTAEA FQIVLSHLLG DAGSPYLIGL ISDRLRRNWP ENSBTAP00000019510/1-528 IVADILLYVV IPTRRSTAEA FQIVLSHLLG DAGSPYLIGS ISDRLRRDWP ENSTTRP00000007494/1-528 IVADILLYVV IPTRRSTAEA FQIVLSHLLG DAGSPYLIGL ISDRLRQGWP bmy_00802T0/1-476 IVADILLYVV IPTRRSTAEA FQIVLSHLLG DAGSPYLIGL ISDRLRQGWP BACU011893/1-495 IVADILL--- ---------- ---------- ---------- ISDRLRQGWP 451 500 ENSP00000309945/1-528 PSFLSEFRAL QFSLMLCAFV GALGGAAFLG TAIFIEADRR RAQLHVQGLL ENSBTAP00000019510/1-528 PSFLSEFRAL QFSLMLCAFV GALGGAAFLG TAIFIESDRR QAQLHVQGLL ENSTTRP00000007494/1-528 PSFLSEFRAL QFSLMLCAFM GALGGAAFLG AAIFIEGDRR RAQLHVQGLL bmy_00802T0/1-476 PSFLSEFRAL QFSLMLCAFM GALGGAAFLG AAIFIEGDRR RAQLHVQGLL BACU011893/1-495 PSFLSEFRAL QFSLMLCAFM GALGGAAFLG AAIFIEGDRR RAQLHVQGLL 501 550 ENSP00000309945/1-528 HEAGSTDDRI VVPQRGRSTR VPVASVLI ENSBTAP00000019510/1-528 PETGPTDDRI VVPQRGRSTR VPVSSVLI ENSTTRP00000007494/1-528 HEAGPADDRI VVPQRGRSTR VPVSSVLI bmy_00802T0/1-476 REAGPADDRI VVPQRGRSTR VPVSSVLI BACU011893/1-495 REAGPADDRI VVPQRGRSTR VPVSSVLI