KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:08:14 2014 Check: 00 .. Name: bmy_04202T0/1-515 Len: 597 Check: 8971 Weight: 1.00 Name: ENSP00000324920/1-587 Len: 597 Check: 4737 Weight: 1.00 Name: ENSBTAP00000019517/1-586 Len: 597 Check: 2292 Weight: 1.00 Name: ENSTTRP00000003510/1-583 Len: 597 Check: 944 Weight: 1.00 // 1 50 bmy_04202T0/1-515 MLGSRFAAGG R--------- --RERRRAGL AGSCVFLFSA ICSSRLGLRR ENSP00000324920/1-587 MNDSLFVSLD RLLLEFVFQY EQDISTKEEM IQRINKCCED IKENKVTICR ENSBTAP00000019517/1-586 MNDSLFVSLD RLLLEFVFQY EQDISTKEDI VQRINKCFED IKEYKATVCK ENSTTRP00000003510/1-583 MNDSLFVSLD RLLLEFVFQY EQDISTKEDM IQRINKCFED IKENKATICK 51 100 bmy_04202T0/1-515 AG-------- ---------- --------WN RAG------- ---------- ENSP00000324920/1-587 IHETINATDE EIDHYCKHSE EIKDNCRNWK PTCDVFRKHE DYMQDQFTVY ENSBTAP00000019517/1-586 IHETINTTDE EIGHYCKHSK EIKDNCSNWK PTCDVFHKHE DYMQEQFIIY ENSTTRP00000003510/1-583 IHETINTTDE EIGHYCKHSK EIEDYCSNWR PTCDIFHKHE DYMKDQFTIY 101 150 bmy_04202T0/1-515 PSGVEAALRG L----GGWRA LSAKYDRRSR SGGFPARGLA LGHTAARGFG ENSP00000324920/1-587 QGTVEKDKEM YHDYICQYKE VLKQYQLKYS ETPF-SREYY EKKREHEEIQ ENSBTAP00000019517/1-586 QETIEKDKKM YHDYICQYKD VLKQYQLKYS ETPL-SREYY EKKREYEEIQ ENSTTRP00000003510/1-583 QETVEKDRKM YHSYICQYKD VLKQYQQKYS ETPL-SHEYY EKKREHEEIQ 151 200 bmy_04202T0/1-515 GRRVAGVSGT DSGEEKRVGC AVPAPFPSLT SWTLHMVNLR CKTQDTLKHA ENSP00000324920/1-587 SRVLACTEQL KMNETIFMKF RVPAPFPSLT KWTLNIVNLR CETQDILKHA ENSBTAP00000019517/1-586 NRVLASTEQL KVNETIFMEF LVPSPFPSLT SWTLHMVNLR YKTQDILKHA ENSTTRP00000003510/1-583 NRVLACTEQL KMNETIFMEF LVPAPFPSLT SWTLH-VNLR CKTQDTLKHA 201 250 bmy_04202T0/1-515 NKFSKRSYEL KKEVDDVEIE INYLNQQIAR LYEMKNLSET LEEKNKNIEK ENSP00000324920/1-587 SNLTKSSSEL KKEVDEMEIE INYLNQQISR HNETKALSET LEEKNKNTEN ENSBTAP00000019517/1-586 NQFSKRSCDL KKEVDDMEIE INYLNQQIAR HYEMKNLPET LEEKSKNVEK ENSTTRP00000003510/1-583 NKFSKRSYEL KKEVDDVEIE INYLNQQITR LYEMKNLSET REEKNKNIEK 251 300 bmy_04202T0/1-515 RKESKE---- ---------- -----SQLFL PYESQKLVKP IKMHPSEPRV ENSP00000324920/1-587 RKELKERIFG KDE-HVLTLN KT-QSSQLFL PYESQKLVRP IKMHSSEPRV ENSBTAP00000019517/1-586 RKELKERIFE KDPQPVLMLN KTLQNSQLFL PYESQKLIKP IKMHSSEPRI ENSTTRP00000003510/1-583 RKESKERIFE KDEQHVLVLN KTPQSSQLFL PYESQKLVKP IKMHPSEPRV 301 350 bmy_04202T0/1-515 KVVPFNNLDK KEESSVKQSK LANIDFRQKE SDIQVLNDSA VNNRSKCSHV ENSP00000324920/1-587 A-------DI KEESSAKQSK LANIDFRQKE NDTQIFNDSA VDNHSKCSHI ENSBTAP00000019517/1-586 I-------DK KEESSVSQSK LANIDFKQKE NDAHVLNDSA VNNHPKCTHV ENSTTRP00000003510/1-583 K-------DK KEESSVKQSK LASIDFRQKE SDTQVLNDSA VNNHSKCSHV 351 400 bmy_04202T0/1-515 TAFKSSQNFM QFRLLTPQKQ SSCNQWLEKG DTDAECGDKG TVKQLRESKC ENSP00000324920/1-587 TTITSSQKFM QVRLLTPQKQ SNSNQWSEKG DKDAEYGDKG TVRQVRESKC ENSBTAP00000019517/1-586 TAFKNSQNVM QFRLVTPQKQ SNCNQWLEKR DTDAECGDKG TIRQLPESKC ENSTTRP00000003510/1-583 TASKSSQNFM QFRL-TPPKQ SDCNQWLEKG DTDAECGDKE TVKQLRESKC 401 450 bmy_04202T0/1-515 TSQVTYAEHL GKPIESNSDE VEERAEIFPR TPEIPLFLRT PEAVRTPDSV ENSP00000324920/1-587 TSQAIYTEHF GKSVENDSDE VEERAENFPR TSEIPIFLGT PKAVKAPESL ENSBTAP00000019517/1-586 ASQITYAEHF GKPIESNSDE VEERAGIFPR TPEIPLFLRT PEDVKAPDSV ENSTTRP00000003510/1-583 TSQVTYAKHL GKPIESNSDE VEERAEIFPR TPEIPLFLRT PEAVRTPDSV 451 500 bmy_04202T0/1-515 EKL--PKTPS FEI--NRNTA TECQTQKESP GFSFFMSYTS RSPGLNLFDS ENSP00000324920/1-587 EKIKFPKTPP FEINRNRNAV PEVQTEKESP GLSFLMSYTS RSPGLNLFDS ENSBTAP00000019517/1-586 EKL--PKTPS IEIIRNRNTA TESQTQKNSP GFSFLMSYTS RSPGLNLFDS ENSTTRP00000003510/1-583 EKL--PKTPS FEIIRNRNTA TECQTQKESP GFSFLMSYTS RSPGLNLFDS 501 550 bmy_04202T0/1-515 SVFDSEISSH QYNEHYSAGN LNLLSSQQEI GNLFGKPEGE DTFTFSFPSD ENSP00000324920/1-587 SVFDTEISSD QFNEHYSARN LNPLSSEQEI GNLLEKPEGE DGFTFSFPSD ENSBTAP00000019517/1-586 SVFDSEISSH QFGEHYSSGN LNPLSSQQEI GNLFGKPERE DAFTFSFPSD ENSTTRP00000003510/1-583 SVFDSEISSH QFHEHYSAGN LNLLSSQQEI GNLFGKPEGE DTFTFSFPLD 551 600 bmy_04202T0/1-515 SSTHTFGAGR DDFSFPFPFE QDQNSTP-SS VKEFSSSSQN TTQFTFF ENSP00000324920/1-587 TSTHTFGAGK DDFSFPFSFG QGQNSIPSSS LKGFSSSSQN TTQFTFF ENSBTAP00000019517/1-586 SSTHTFGAGR DDFSFPFSLE QDQNSGL-SS VKGFSSSSQN TTQFTFF ENSTTRP00000003510/1-583 SSTHTLGAGR DDFSFAFPFE QDQNSTP--S EKEFSSSSQN TTQFTLF