KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:18 2014 Check: 00 .. Name: ENSTTRP00000011628/1-344 Len: 478 Check: 2326 Weight: 1.00 Name: ENSP00000389087/1-390 Len: 478 Check: 5560 Weight: 1.00 Name: ENSBTAP00000019528/1-344 Len: 478 Check: 9803 Weight: 1.00 Name: bmy_18395T0/1-366 Len: 478 Check: 8236 Weight: 1.00 Name: BACU006025/1-432 Len: 478 Check: 6416 Weight: 1.00 // 1 50 ENSTTRP00000011628/1-344 ---------- ---------- ---------- ---------- ------MAAL ENSP00000389087/1-390 MRTRTGSQLA AREVTGSGAV PRQLEGRRCQ AGRDANGGTS SDGSSSMAAI ENSBTAP00000019528/1-344 ---------- ---------- ---------- ---------- ------MVTL bmy_18395T0/1-366 ---------- ---------- ---------- ---------- ------MAAL BACU006025/1-432 ---------- ---------- ---------- ---------- ------MAAL 51 100 ENSTTRP00000011628/1-344 YGGVEGGGTR SKVLLLSEDG QVLAEADGLS TNHW------ ---------- ENSP00000389087/1-390 YGGVEGGGTR SEVLLVSEDG KILAEADGLS TNHW------ ---------- ENSBTAP00000019528/1-344 YGGVEGGGTR SKVLLLSEDG QILAEADGLS TNHW------ ---------- bmy_18395T0/1-366 YGGVEGGGTR SKVLLLSEDG QILAEADGLS TNHWVKATLR GPVGLTVVLF BACU006025/1-432 YGGVEGGGTR SKVLLLSEDG QILAEADGLS TNHWVKATLR GPVGLTVVLF 101 150 ENSTTRP00000011628/1-344 ------LIGT DKCVERINEM VNRAKRKAGV DPLVPLRSLG LSLSGGDQED ENSP00000389087/1-390 ------LIGT DKCVERINEM VNRAKRKAGV DPLVPLRSLG LSLSGGDQED ENSBTAP00000019528/1-344 ------LIGT DKCVERINEM VNRAKRKAGV DPLVPLRGLG LSLSGGDQED bmy_18395T0/1-366 SVTPVKLIGT DKCVERINEM VNRAKRKAGV DPLVPLRSLG LSLSGGDQED BACU006025/1-432 SVTPVKLIGT DKCVERINEM VNRAKRKAGV DPLVPLRSLG LSLSGGDQED 151 200 ENSTTRP00000011628/1-344 AVRILMEELR DRFPYLSESY LITTDAAGSI ATATPDGGIV LISGTGSNCR ENSP00000389087/1-390 AGRILIEELR DRFPYLSESY LITTDAAGSI ATATPDGGVV LISGTGSNCR ENSBTAP00000019528/1-344 AVRMLMEELR DRFPYLSESY LITTDAAGSI ATATPDGGVV LISGTGSNCR bmy_18395T0/1-366 AVRILMEELR DRFPYLSESY LITTDAAGSI ATATPDGGIV LISGTGSNCR BACU006025/1-432 AVRILMEELR DRFPYLSESY LITTDAAGSI ATATPDGGIV LISGTGSNCR 201 250 ENSTTRP00000011628/1-344 LINPDGSESG CGGWGHMMGD EGSAYWIAHQ AVKIVFDSID NLEAAPHXXX ENSP00000389087/1-390 LINPDGSESG CGGWGHMMGD EGSAYWIAHQ AVKIVFDSID NLEAAPHDIG ENSBTAP00000019528/1-344 LINPDGSESG CGGWGHMMGD EGSAYWIAHQ AVKIVFDSID NLEAAPHDIG bmy_18395T0/1-366 LINPDGSESG CGGWGHMMGD EGSAYWIAHQ AVKIVFDSID NLEAAPHDIG BACU006025/1-432 LINPDGSESG CGGWGHMMGD EGSAYWIAHQ AVKIVFDSID NLEAAPHDIG 251 300 ENSTTRP00000011628/1-344 XXXXXXXXXX X--------- ---------- ---------- ---------- ENSP00000389087/1-390 YVKQAMFHYF Q--------- ---------- ---------- ---------- ENSBTAP00000019528/1-344 YVKQAMFNYF Q--------- ---------- ---------- ---------- bmy_18395T0/1-366 YVKQAMFNYF Q--------- ---------- ---------- ---------- BACU006025/1-432 YVKQAMFNYF QVLSLPLVHM HTWDRAVGDQ AGVNSGEGLG GPGDVGVNCL 301 350 ENSTTRP00000011628/1-344 ---------- ---------- -------VPD RLGILTHLYR DFDKCRFAGF ENSP00000389087/1-390 ---------- ---------- -------VPD RLGILTHLYR DFDKCRFAGF ENSBTAP00000019528/1-344 ---------- ---------- -------VPD RLGILTHLYR DFDKSRFAGF bmy_18395T0/1-366 ---------- ---------- -------VPD RLGILTHLYR DFDKCRFAGF BACU006025/1-432 SELEDGEVVC EDQIQNEVGM HSPQEERVPD RLGILTHLYR DFDKCRFAGF 351 400 ENSTTRP00000011628/1-344 CRKVAEGAQQ GDPLSRYIFR KAGEMLGRHV VAVLPEIDPV LFQGEIGLPI ENSP00000389087/1-390 CRKIAEGAQQ GDPLSRYIFR KAGEMLGRHI VAVLPEIDPV LFQGKIGLPI ENSBTAP00000019528/1-344 CRKVAEGAQQ GDPLSRCIFR KAGEMLGRHV VAVLPEIDPV LFQGEMGLPI bmy_18395T0/1-366 CRKVAEGAQQ GDPLSRYIFR KAGEMLGRHV VAVLPEIDPV LFQGEIGLPI BACU006025/1-432 CRKVAEGAQQ GDPLSRYIFR KAGEMLGRHV VAVLPEIDPV LFQGEIGLPI 401 450 ENSTTRP00000011628/1-344 LCVGSVWKSW ELLKEGFLLA LTQGREIQAQ NSFSSFTLLK LQHSSALGGA ENSP00000389087/1-390 LCVGSVWKSW ELLKEGFLLA LTQGREIQAQ NFFSSFTLMK LRHSSALGGA ENSBTAP00000019528/1-344 LCVGSVWKSW ELLKEGFLLA LTQGREIQAQ NSFSGFTLLK LRHSSALGAA bmy_18395T0/1-366 LCVGSVWKSW ELLKEGFLLA LTQGREIQAQ NSFSSFTLLK LRHSSALGGA BACU006025/1-432 LCVGSVWKSW ELLKEGFLLA LTQGREIQAQ NSFSSFTLLK LRHSSALGGA 451 500 ENSTTRP00000011628/1-344 SLGARHIGHL LPMDYSVNAI AFYSYTFS ENSP00000389087/1-390 SLGARHIGHL LPMDYSANAI AFYSYTFS ENSBTAP00000019528/1-344 SLGAKHIGHL LPMDYSTSAI AFYSYTFS bmy_18395T0/1-366 SLGARHIGHL LPMDYSVNAI AFYSYTFS BACU006025/1-432 SLGARHIGHL LPMDYSVNAI AFYSYTFS