KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:19 2014 Check: 00 .. Name: ENSP00000370013/1-388 Len: 389 Check: 7014 Weight: 1.00 Name: ENSBTAP00000019535/1-384 Len: 389 Check: 8976 Weight: 1.00 Name: ENSTTRP00000011239/1-388 Len: 389 Check: 7313 Weight: 1.00 Name: bmy_13420T0/1-346 Len: 389 Check: 8342 Weight: 1.00 Name: BACU006206/1-384 Len: 389 Check: 6944 Weight: 1.00 // 1 50 ENSP00000370013/1-388 MVRDSMAAAF RPSNRVL-LQ ALQILVYPGV GGSGSVSCRC PLGAKRYLLT ENSBTAP00000019535/1-384 -----MAATL RPPKQVLLLH ALRSLVYHWV GGSGSTCCLC PLGAKRYLLT ENSTTRP00000011239/1-388 TARNSMAAAF LPPKQVLPLQ ALRSLVHPGL GGLGSTCSRC PLGAKRYLLT bmy_13420T0/1-346 ---------- ---------- ---------- ---------- ---AKRYLLT BACU006206/1-384 -----MAAAF RPAKQVLPLQ ALRSLVYPGL GGSGSTCSRC PLGAKRYLLT 51 100 ENSP00000370013/1-388 DNVVKLKEFQ QKKVAVACNL SGTKETYFRN LKKKLTQNKL ILKGELITLL ENSBTAP00000019535/1-384 DSIVKLKEFQ RKKVAVACNL PGTKETYLRN LEEKLTQNKL ILKEELRTLL ENSTTRP00000011239/1-388 DNIVKLKDFQ HKKVAVACNL PGTKETYLRN LEEKLTQNKL ILKEELRTLL bmy_13420T0/1-346 DNIVKLKDFQ HKKVAVACNL PGTKETYLRN LEEKLTQSKL ILKEELRTLL BACU006206/1-384 DNIVKLKDFQ HKKVAVACNL PGTKETYLRN LEEKLTQSKL ILKEELRTLL 101 150 ENSP00000370013/1-388 HLCESRDHVE LAKNVIYRYH AENKNFTLGE YKFGPLFVRL CYELDLEESA ENSBTAP00000019535/1-384 HLCTSRDDVE LAKHVIYRYH AENRNITLGE YKFGPLFVRL CYELDLEDSA ENSTTRP00000011239/1-388 HLCECWDDVE LAKNVIYRYH AENRNITLGE YKFGPLFMRL CYELDLEESA bmy_13420T0/1-346 HLCESWDDVE LAKNVIYRYH AENRNITLGE YKFGPLFMRL CYELDLEESA BACU006206/1-384 HLCESWDDVE LAKNVIYRYH AENRNITLGE YKFGPLFMRL CYELDLEESA 151 200 ENSP00000370013/1-388 VELMKDQHLR GFFSDSTSFN ILMDMLFIKG KYKSALQVLI EMKNQDVKFT ENSBTAP00000019535/1-384 VELIKDQHLQ GFFSDSTSFN ILMDMLFIKG KYRSALEVLI QMKNQDLKFN ENSTTRP00000011239/1-388 VELIKDQHLR GFFSDSTSFN ILMDMLFIKG KYKSALEVLI EMKNQDVKFN bmy_13420T0/1-346 VELIKDQHLR GFFSDSTSFN ILMDMLFIKG KYKSALEVLI EMKNQDVKFN BACU006206/1-384 LELIKDQHLR GFFSDSTSFN ILMDMLFIKG KYKSALEVLI EMKNQDVKFN 201 250 ENSP00000370013/1-388 KDTYVLAFAI CYKLNSPESF KICTTLREEA LLKGEILSRR ASCFAVALAL ENSBTAP00000019535/1-384 KDTYVLAFAI CYKLNSPESF QICTTLREEA LIKGEILPRR ASCFAVALAL ENSTTRP00000011239/1-388 KDTYILAFAV CYKLNSPESF TICTTLREEA LIKGEILCRR ASCFAVALAL bmy_13420T0/1-346 KDTYVLAFAI CYKLNSPESF TICTTLREEA LIKGEILSRR ASCFAVALAL BACU006206/1-384 KDTYILAFAI CYKLNSPESF TICTTLREEA LIKGEILSRR ASCFAVALAL 251 300 ENSP00000370013/1-388 NQNEMAKAVS IFSQIMNPES IACINLNIII HIQSNMLENL IKTLKNAAEG ENSBTAP00000019535/1-384 NQNQVAKAIS IFSQIMNPES IICTNLNIMI HIQSNMLKTL IDILKDATEG ENSTTRP00000011239/1-388 NQNQLAKAIS IFSQIMKPES IICTNLNLMI HIQSNMLKSL IDTLKDATEG bmy_13420T0/1-346 NQNQLAKAIS IFSQIMKPES IICTNLNIMI HIQSNMLKTL IDTLKDATEG BACU006206/1-384 NQNQLAKAIS IFSQIMKPES IICTNLNIMI HIQSNMLKTL IDILKDATEG 301 350 ENSP00000370013/1-388 NLSKFVKRHV FSEEVLAKVR EKVKDVPALV AKFDEIYGTL HITGQVTTDS ENSBTAP00000019535/1-384 NLSRFVKRHV FSEEVLVKVR EKVKDVPALL AEFDELNKKL HRSGQVTAYT ENSTTRP00000011239/1-388 NLSRFVKKPV FS-QVLVKVR EKVKDVPALL ATFDELYGKL HINGQVTTYT bmy_13420T0/1-346 NLSRFVKKHV FSEEVLVKVR EKVQDVPALL ATFDELYEKL HIHGQVTTYT BACU006206/1-384 NLSRFVKKHV FSEEVLVKVR EKVQDVPALL ATFDELYGKL HIHGRVTAYT 351 400 ENSP00000370013/1-388 LDAVLCHTPR DRKSHTLLLN KRMVSRRTFQ PLSQSLLAE ENSBTAP00000019535/1-384 LDALLCHTPS DRQSYTVLLN KRTVSRRTFQ PLSQSLWAE ENSTTRP00000011239/1-388 LDALLCHTPS DRKSHTVLLN KRTVSRRTFQ PLSQSLWAE bmy_13420T0/1-346 LDALLCHTPS DRKSHTVLLN KRTVSRRTFQ PLSQSLWAE BACU006206/1-384 LDALLCHTPS DRKSHTVLLN KRTVSRRTFQ PLSQSLWAE