KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:19 2014 Check: 00 .. Name: bmy_02872T0/1-406 Len: 443 Check: 9707 Weight: 1.00 Name: ENSP00000377918/1-443 Len: 443 Check: 2601 Weight: 1.00 Name: ENSBTAP00000019537/1-443 Len: 443 Check: 2080 Weight: 1.00 Name: BACU013981/1-423 Len: 443 Check: 515 Weight: 1.00 Name: ENSTTRP00000008455/1-438 Len: 443 Check: 7981 Weight: 1.00 // 1 50 bmy_02872T0/1-406 MDRLSSFSND PSDKPPCRGC SSYLMEPYIK CAECGPPPFF LCLQCFTRGF ENSP00000377918/1-443 MDRLGPFSND PSDKPPCRGC SSYLMEPYIK CAECGPPPFF LCLQCFTRGF ENSBTAP00000019537/1-443 MDRLGSFSSD PSDKPPCRGC SSYLMEPYIK CAECGPPPFF LCLQCFTRGF BACU013981/1-423 MDRLSSFSND PSDKPPCRGC SSYLMEPYIK CAECGPPPFF LCLQ------ ENSTTRP00000008455/1-438 -----NFSDD PSDKPPCRGC SSYLMEPYIK CAECGPPPFF LCLQCFTRGF 51 100 bmy_02872T0/1-406 EYKKHQSDHT YEIMTSDFPV LDPSWTAQEE MALLEAVMDC GFGNWQDVAN ENSP00000377918/1-443 EYKKHQSDHT YEIMTSDFPV LDPSWTAQEE MALLEAVMDC GFGNWQDVAN ENSBTAP00000019537/1-443 EYKKHQSDHT YEIMTSDFPV LDPSWTAQEE MALLEAVMDC GFGNWQDVAN BACU013981/1-423 ---------- ----TSDFPV LDPSWTAQEE MALLEAVMDC GFGNWQDVAN ENSTTRP00000008455/1-438 EYKKHQSDHT YEIMTSDFPV LDPSWTAQEE MALLEAVMDC GFGNWQDVAN 101 150 bmy_02872T0/1-406 QMCTKTKEEC EKHYMKHFIN NPLFASTLLN LKQAEEAKTA DTAIPFHSTD ENSP00000377918/1-443 QMCTKTKEEC EKHYMKHFIN NPLFASTLLN LKQAEEAKTA DTAIPFHSTD ENSBTAP00000019537/1-443 QMCTKTKEEC EKHYMKHFIN NPLFASTLLN LKQAEEAKTA DTAIPFHSAD BACU013981/1-423 QMCTKTKEEC EKHYMKHFIN NPLFASTLLN LKQAEEAKTA DTAIPFHSTD ENSTTRP00000008455/1-438 QMCTKTKEEC EKHYMKHFIN NPLFASTLLN LKQAEEAKTA DTAIPFHSTD 151 200 bmy_02872T0/1-406 DPPRPTFDSL LSRDMAGYMP ARADFIEKFT ILGYFCFQGT DFLDRSED-- ENSP00000377918/1-443 DPPRPTFDSL LSRDMAGYMP ARADFIEEFD NYAEWDLRDI DFVEDDSDIL ENSBTAP00000019537/1-443 DPPRPTFDSL LSRDMAGYMP ARADFIEEFD NYAEWDLRDI DFVEDDSDIL BACU013981/1-423 DPPRPTFDSL LSRDMAGYMP ARADFIEEFD NYAEWDLRDI DFVEDDSDIL ENSTTRP00000008455/1-438 DPPRPTFDSL LSRDMAGYMP ARADFIEEFD NYAEWDLRDI DFVEDDSDIL 201 250 bmy_02872T0/1-406 -----GCSRY LSFQVKGETK AKK------L SSLLPVIVME RRYPKEVQDL ENSP00000377918/1-443 HALKMAVVDI YHSRLKERQR RKKIIRDHGL INLRKFQLME RRYPKEVQDL ENSBTAP00000019537/1-443 HALKMAVVDI YHSRLKERQR RKKIIRDHGL INLRKFQLME RRYPKEVQDL BACU013981/1-423 HALKMAVVDI YHSRLKERQR RKKIIRDHGL INLRKFQLME RRYPKEVQDL ENSTTRP00000008455/1-438 HALKMAVVDI YHSRLKERQR RKKIIRDHGL INLRKFQLME RRYPKEVQDL 251 300 bmy_02872T0/1-406 YETMRRFARI VGPVEHDKFI ESHA------ ---------- --------CA ENSP00000377918/1-443 YETMRRFARI VGPVEHDKFI ESHALEFELR REIKRLQEYR TAGITNFCSA ENSBTAP00000019537/1-443 YETMRRFARI VGPVEHDKFI ESHALEFELR REIKRLQEYR TAGITNFCSA BACU013981/1-423 YETMRRFARI VGPVEHDKFI ESHALEFELR REIKRLQEYR TAGITNFCSA ENSTTRP00000008455/1-438 YETMRRFARI VGPVEHDKFI ESHALEFELR REIKRLQEYR TAGITNFCSA 301 350 bmy_02872T0/1-406 RTYDHLKKTR EEERLKRTML SEVLQYIQDS SACQQWLRRQ ADIDSGLSPS ENSP00000377918/1-443 RTYDHLKKTR EEERLKRTML SEVLQYIQDS SACQQWLRRQ ADIDSGLSPS ENSBTAP00000019537/1-443 RTYDHLKKTR EEERLKRTML SEVLQYIQDS SACQQWLRRQ ADIDSGLSPS BACU013981/1-423 RTYDHLKKTR EEERLKRTML SEVLQYIQDS SACQQWLRRQ ADIDSGLSPS ENSTTRP00000008455/1-438 RTYDHLKKTR EEERLKRTML SEVLQYIQDS SACQQWLRRQ ADIDSGLSPS 351 400 bmy_02872T0/1-406 IPMASNSGRR SAPPLNLTGL PGTEKLNEKE KELCQMVRLV PGAYLEYKSA ENSP00000377918/1-443 IPMASNSGRR SAPPLNLTGL PGTEKLNEKE KELCQMVRLV PGAYLEYKSA ENSBTAP00000019537/1-443 VPMTSNSGRR SAPPLNLTGL PGTEKLNEKE KELCQMVRLV PGAYLEYKSA BACU013981/1-423 VPMASNSGRR SAPPLNLTGL PGTEKLNEKE KELCQMVRLV PGAYLEYKSA ENSTTRP00000008455/1-438 VPMASNSGRR SAPPLNLTGL PGTEKLNEKE KELCQMVRLV PGAYLEYKSA 401 450 bmy_02872T0/1-406 LLNECNKQGG LRLAQARALI KIDVNKTRKI YDFLIREGYI TKA ENSP00000377918/1-443 LLNECNKQGG LRLAQARALI KIDVNKTRKI YDFLIREGYI TKG ENSBTAP00000019537/1-443 LLNECNKQGG LRLAQARALI KIDVNKTRKI YDFLIREGYI TKA BACU013981/1-423 LLNECNKQGG LRLAQARALI KIDVNKTRKI YDFLIREGYI TKA ENSTTRP00000008455/1-438 LLNECNKQGG LRLAQARALI KIDVNKTRKI YDFLIREGYI TKA