KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:21 2014 Check: 00 .. Name: ENSP00000301057/1-393 Len: 499 Check: 9153 Weight: 1.00 Name: ENSTTRP00000015479/1-352 Len: 499 Check: 5935 Weight: 1.00 Name: ENSBTAP00000019549/1-395 Len: 499 Check: 7099 Weight: 1.00 Name: bmy_00136T0/1-498 Len: 499 Check: 1133 Weight: 1.00 Name: BACU010486/1-79 Len: 499 Check: 537 Weight: 1.00 // 1 50 ENSP00000301057/1-393 ---------- ---------- ---------- ---------- -MAPPPPSPQ ENSTTRP00000015479/1-352 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019549/1-395 ---------- ---------- ---------- ---------- -MAPPPPPPQ bmy_00136T0/1-498 GRRARARGLR GHAGVVDARG QGQAARAPWL AGLRAVLGRA GMAPPPPPPQ BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000301057/1-393 LLLLAALARL LGPSE----- ---------- ---------- ---------- ENSTTRP00000015479/1-352 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019549/1-395 LLLLAALAGL LGPREV---- ---------- ---------- ---------- bmy_00136T0/1-498 LLLLAALAGL LGPSEVRRPA PEKPSARDLK ALCQKFVLEG VARGEGTRSS BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000301057/1-393 ---------- ---------- ---------V MAGPAEEAGA HCPESLWPLP ENSTTRP00000015479/1-352 ---------- ---------- ---------- ---------- -----LWPL- ENSBTAP00000019549/1-395 ---------- ---------- ---------V AEPAAEEAGA RCPEGLWPLP bmy_00136T0/1-498 PLGGLGLGGR GQSPRRGQTP QLFCALNPQV VAEPAEEAGT RCPEGLWPLP BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000301057/1-393 PQVSPRVTYT RVSPGQAEDV TFLYHPCAHP WLKLQLALLA YACMANPSLT ENSTTRP00000015479/1-352 PHVSPRVTYT RVSPRQAEDV SFLYHPCAHP WLKLQLAFLA HICMAQPLLA ENSBTAP00000019549/1-395 PQVSPRVTYT RMRPQQSEDV SFLYHPCAHP WLKLQLALLA HTCVAQPSLA bmy_00136T0/1-498 PQVSPRVTYT RVSPRQAEDV SFLYHPCAHP WLKLQLAFLA HICVAQPLLV BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000301057/1-393 PDFSLTQDRP LVLTAWGLAL EMAWVEPAWA AHWLMRRRRR KQRKKKAWIY ENSTTRP00000015479/1-352 PDSSLTQDRP LVLAAWGVAL EMAWVEPAWA AHWLKRRRRR KQKKEKAWFR ENSBTAP00000019549/1-395 PDSSLTQDRP LVLAAWGLAL EMAWVEPARA AHWLKRRQWR KQRREKAGFR bmy_00136T0/1-498 PDSSLTQDRP LVLAAWGVAL EMAWVEPAWA AHWLKRRRRR KQKKEKAWFR BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000301057/1-393 CESLSGPAPS EPTPGRGRLC -RRGCVQALA LAFALRSWRP PGTEVTSQGP ENSTTRP00000015479/1-352 SDSFSGPYPL VPTPGRGRLC -RRGCVQATA LAFTLRSWRP PGVEVASRGP ENSBTAP00000019549/1-395 SDTVPGPPSL VPTLGRGRLC SQRGCVQAPA LAFTLWSWRP PGMEVASSGH bmy_00136T0/1-498 SDSFSGPYPL VPAPGRGRLC -RRGCVQAPA LAFTLRSWRP PGLEVASRGP BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000301057/1-393 RQPSSSGAKR RRLRAALGPQ PTRSALRFPS ASPGSLKAKQ SMAGIPGRES ENSTTRP00000015479/1-352 RQLFPSGAKR RGLRAALGLQ PTPSALRFRS VSPRSMEAKQ PVLGPQGARD ENSBTAP00000019549/1-395 GQLFPSGARR RGLRAALGLQ PTPSAPRFPS VSPGSLEAKQ PMLGSQGEGN bmy_00136T0/1-498 RQLFPSGARR RGLRAALGLQ PTPSALRFRS VSPRSMEAKQ PMLGPQGARD BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000301057/1-393 NAPSVPTVSL LPGAPGGNAS SRTEAQVPNG QGSPGGCVCS SQASPAPRAA ENSTTRP00000015479/1-352 NAPSVPTGPL LPGGPGSSVS SRLEAQVPKG QSSPGACACP SQASPAARAA ENSBTAP00000019549/1-395 NAGSVSTGPL LPEGPGSNVS SRLEVQLPKG QNSPGGCACL GQASPAPRAA bmy_00136T0/1-498 NAPSVPTGPL LLGGPGSNVS SRLEAQVPKG QSSPGVCACP SQASPAARAA BACU010486/1-79 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000301057/1-393 APPRAARGPT PRTEEAAWAA MALTFLLVLL TLATLCTRLH RNFRRGESIY ENSTTRP00000015479/1-352 APPRAARGPT PRTEEAAWAA MALTFLLVLL TLATLCTRLH RNFRRGESIY ENSBTAP00000019549/1-395 GPPRAARGPT PRTEEAAWAA MALTFLLVLL TLATLCTRLH RNFRRGESIY bmy_00136T0/1-498 APPRAARGPT PRTEEAAWAA MALTFLLVLL TLATLCTRLH RNFRRGESIY BACU010486/1-79 ---------- ---------- MALTFLLVLL TLATLCTRLH RNFRRGESIY 451 500 ENSP00000301057/1-393 WGPTADSQDT VAAVLKRRLL QPSRRVKRSR RRPLLPPTPD SGPEGESSE ENSTTRP00000015479/1-352 WEPTVDSQDT VAAVLKRRLQ MPPRRVKRSR RRPLLPPTPD SGPDGDSSE ENSBTAP00000019549/1-395 WEPTVDSRDT VAAVLKRRLL MPPRRVKRSR RRPLLPPTPD SGPDGDSSE bmy_00136T0/1-498 WEPTVDSQDT VAAVLKRRLL MPPRRVKRSR RRPLLPPTPD SGPDGDSSE BACU010486/1-79 WEPTVDSQDT VAAVLKRRLL MPPRRVKRSR RRPLLPPTPD SGPDGDSSE