KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:24 2014 Check: 00 .. Name: ENSTTRP00000010598/1-395 Len: 422 Check: 3625 Weight: 1.00 Name: ENSP00000357596/1-395 Len: 422 Check: 5947 Weight: 1.00 Name: ENSBTAP00000019554/1-393 Len: 422 Check: 2280 Weight: 1.00 Name: bmy_09691T0/1-411 Len: 422 Check: 9285 Weight: 1.00 Name: BACU007484/1-395 Len: 422 Check: 6963 Weight: 1.00 // 1 50 ENSTTRP00000010598/1-395 MDFRTPDLLE MWLEPPEDVF STGSFLELGL HGPPSEVPVT RLQEQGLQGW ENSP00000357596/1-395 MDLGIPDLLD AWLEPPEDIF STGSVLELGL HCPPPEVPVT RLQEQGLQGW ENSBTAP00000019554/1-393 MDFKTPDLLD MCLEPPEDVF STGSFLELGL QGLPSEVPVT RLQEQRLQGW bmy_09691T0/1-411 MDFRTPDLLE MWLEPPEDVF STGSFLELGL HGPPSEVPVT RLQEQGLQGW BACU007484/1-395 MDFRTPDLLE MWLEPPEDVF STGSFLELGL HGPPSEVPVT RLQEQGLQGW 51 100 ENSTTRP00000010598/1-395 ESSGGHGCGL QESEPEDFLK LFIDPNEVYC SEASPGSDSG SSEDPRHPDS ENSP00000357596/1-395 KSGGDRGCGL QESEPEDFLK LFIDPNEVYC SEASPGSDSG ISEDPCHPDS ENSBTAP00000019554/1-393 ECSVGHGYGL QESEPEDFLK LFIDPNQVYC SEASPGSDSG ISEDPGHPDS bmy_09691T0/1-411 ESSGGHG--- -------FVS V-MNGSGLYC SEASPGSDSG ISEDPRHPDS BACU007484/1-395 ESSGGHGFGL QESEPEDFLK LFIDPNEVYR SEASPGSDSG ISEDPRHPDS 101 150 ENSTTRP00000010598/1-395 PPAPKPPSSP ALYEVVYEAG TLERMQGEAG PAVGLISIQI DQWSPPFMVP ENSP00000357596/1-395 PPAPRATSSP MLYEVVYEAG ALERMQGETG PNVGLISIQL DQWSPAFMVP ENSBTAP00000019554/1-393 PPAPKPPSSP ALYEVVYEAG TLERMQGEAG PAVGLISIQL DQWSTPFTVP bmy_09691T0/1-411 PSAPKPPSSP ALYEVVYEAG TLERMQGEAG PAVGLISIQI DQWSPPFMVP BACU007484/1-395 PPAPKPPSSP ALYEVVYEAG TLERMQGEAG PAVGLISIQI DQWSPPFMVP 151 200 ENSTTRP00000010598/1-395 DACVVSELPP DAHAHILPRA GPVNSVPPAA L--------- ---------- ENSP00000357596/1-395 DSCMVSELPF DAHAHILPRA GTVAPVPCTT L--------- ---------- ENSBTAP00000019554/1-393 DACVVSELPP D--AHILPTA ATVNSAPPAA L--------- ---------- bmy_09691T0/1-411 DACVVSEPPP DAHAHILPRA GTVNSVPPAA LEACKGNSMS TENGMTLSPF BACU007484/1-395 DACVVSEPPP DAHAHILPRA GTVNSVPPAA L--------- ---------- 201 250 ENSTTRP00000010598/1-395 --------LP CQTLFLTEEE KRLLGQEGVS LPSHLPINKA EERVLKKVRR ENSP00000357596/1-395 --------LP CQTLFLTDEE KRLLGQEGVS LPSHLPLTKA EERVLKKVRR ENSBTAP00000019554/1-393 --------LP CQTLFLTEEE KRLLGQEGVS LPSHLPLTKA EERVLKKVRR bmy_09691T0/1-411 SSSLVPHQLP CQTLFLTEEE KRLLGQEGVS LPSHLPLTKA EERVLKKVRR BACU007484/1-395 --------LP CQTLFLTEEE KHLLGQEGVS LPSHLPLTKA EERVLKKVRR 251 300 ENSTTRP00000010598/1-395 KIGNKQSVQD SWRRKKEYID GLESRSEAXX XXXXXXXXXX XXXXXXXXXX ENSP00000357596/1-395 KIRNKQSAQD SRRRKKEYID GLESRVAACS AQNQELQKKV QELERHNISL ENSBTAP00000019554/1-393 KIRNKQSAQD SRRRKKEYID GLESRVAACA AQNQELQRKV QELERHNISL bmy_09691T0/1-411 KIRNKQSAQD SRRRKKEYID GLESRVAACS AQNQELQKKV QELERHNISL BACU007484/1-395 KIRNKQSAQD SRRRKKEYID GLESRVAACS AQNQELQKKV QELERHNISL 301 350 ENSTTRP00000010598/1-395 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357596/1-395 VAQLRQLQTL IAQTSNKAAQ TSTCVLILLF SLALIILPSF SPFQSRPEAG ENSBTAP00000019554/1-393 VTQLRQLQML IVQTSNKAAQ TSTCVLILLF SLALIILPSF SPFQGLPEAG bmy_09691T0/1-411 VTQLRQLQML IVQTSNKAAQ TSTCVLILLF SLALIILPSF SPFQGLPEAG BACU007484/1-395 VTQLRQLQML IVQTSNKAAQ TSTCVLILLF SLALIILPSF SPLQGLPEAG 351 400 ENSTTRP00000010598/1-395 XXXXXXXXXI SRNILTHKDM TENLENPAVE SRLEGSPGAK GVNGSTRTLL ENSP00000357596/1-395 SEDYQPHGVT SRNILTHKDV TENLETQVVE SRLREPPGAK DANGSTRTLL ENSBTAP00000019554/1-393 PEDYQPHGVI SRNILTHRDM TENPENAVEE SRLEGPPGAK GANSSTRTPL bmy_09691T0/1-411 PEDYQPHGVI SRNILTHKDM TENLENPAVE SRLEGPPGAK GVNGSTRTLL BACU007484/1-395 PEDYQPHGVI SRNILTHKDM TENLENPAVE SRLEGPPGAK GVNGSTRTLL 401 450 ENSTTRP00000010598/1-395 EKTGGRAGPS RHIRTVLHAD EM ENSP00000357596/1-395 EKMGGKPRPS GRIRSVLHAD EM ENSBTAP00000019554/1-393 EKVGGMAGPS RHIRTVLHAD EM bmy_09691T0/1-411 EKTGGRAGPS RHIRTVLHAD EM BACU007484/1-395 EKTGGRAGPS RHIRTVLHAD EM