KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:25 2014 Check: 00 .. Name: ENSP00000331479/1-228 Len: 237 Check: 9101 Weight: 1.00 Name: ENSBTAP00000019561/1-237 Len: 237 Check: 6001 Weight: 1.00 Name: bmy_01724T0/1-228 Len: 237 Check: 9941 Weight: 1.00 Name: BACU001230/1-228 Len: 237 Check: 147 Weight: 1.00 Name: ENSTTRP00000009765/1-228 Len: 237 Check: 9686 Weight: 1.00 // 1 50 ENSP00000331479/1-228 MPRRGLVAGP DLEYFQRRYF TPAEVAQHNR PEDLWVSYLG RVYDLTSLAQ ENSBTAP00000019561/1-237 MPSRGLVAGP NFEYFQRRYF TPAEVAQHNQ PEDLWVSYLG NVYNLTPLAQ bmy_01724T0/1-228 MPRRGLVAGP DFEYFQRRYF TPAEVAQHNQ PEDLWVSYLG NVYDLTPLAQ BACU001230/1-228 MPRRGLVAGP DFEYFQRRYF TPAEVAQHNQ PEDLWVSYLG NVYDLTPLAQ ENSTTRP00000009765/1-228 MARRGLVAGP DFEYFQRRYF TPAEVAQHNQ PEDLWVSYLG NVYDLTPLAQ 51 100 ENSP00000331479/1-228 EYK------- --GNLLLKPI VEVAGQDISH WFDPKTRDIR KHIDPLTGCL ENSBTAP00000019561/1-237 EYKVRATLWA SVGDLLLKPI VEVAGQDISH WFDPKTRDIR KHIDPLTGSL bmy_01724T0/1-228 EYK------- --GDLLLKPI VEVAGQDISH WFDPDTRDIR KHVDPLTGSL BACU001230/1-228 EYK------- --GDLLLKPI VEVAGQDISH WFDPDTRDIR KHVDPLTGSL ENSTTRP00000009765/1-228 EYK------- --GDLLLKPI VEVAGQDISH WFDPDTRDIR KHIDPLTGSL 101 150 ENSP00000331479/1-228 RYCTPRGRFV HVPPQLPCSD WANDFGKPWW QGSYYEVGRL SAKTRSIRII ENSBTAP00000019561/1-237 RYRTPRGRFL HVPPQLPRSD WANDFGTPWW QGSRYEVGRL SSKTRNIRII bmy_01724T0/1-228 RYRTPWGRFL HVPPQLPRSD WANDFGKPWW QGSRYEMGRL SAKTRNIRII BACU001230/1-228 RYRTPWGRFL HVPPQLPRSD WANDFGKPWW QGSRYEVGWL SAKTRNIRII ENSTTRP00000009765/1-228 RYRTPWGRFL HVPPQLPRSD WANDFGKPWW QGSRYEVGRL SAKTRNIRII 151 200 ENSP00000331479/1-228 NTLTSQEHTL EVGVLESIWE ILHRYLPYNS HAASYTWKYE GKNLNMDFTL ENSBTAP00000019561/1-237 NTLTSQEHTL EVGALESMWE ILHRYLPYNA HAASYTWKYD GKNLNMDYTL bmy_01724T0/1-228 NTLTSQEHTL EVGALESMWE ILHRYLLYNA HAASYTWKYE GKNLNMDYTL BACU001230/1-228 NTLTSQEHTL EVGALESMWE ILHRYLLYNA HAASYTWKYE GKNLNMDYTL ENSTTRP00000009765/1-228 NTLTSQEHTL EVGALESMWE ILHRYLLYNA HAASYTWKYE GKNLNMDYTL 201 250 ENSP00000331479/1-228 EENGIRDEEE EFDYLSMDGT LHTPAILLYF NDDLTEL ENSBTAP00000019561/1-237 EENGIQDQQE EFDYLNMDST LYTPAVLLYF NDDLTEL bmy_01724T0/1-228 EENGIRDEEE EFDYLNMDST LYTPAVLLYF SDDLTEL BACU001230/1-228 EENGIRDEEE EFDYLNMDST LYTPAVLLYF SDDLTEL ENSTTRP00000009765/1-228 EENGIRDEEE EFDYLNMDST LYTPAVLLYF SDDLTEL