KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:26 2014 Check: 00 .. Name: ENSTTRP00000015563/1-1177 Len: 1369 Check: 5509 Weight: 1.00 Name: BACU008131/1-1115 Len: 1369 Check: 9733 Weight: 1.00 Name: bmy_03928T0/1-1366 Len: 1369 Check: 3427 Weight: 1.00 Name: ENSP00000267064/1-1214 Len: 1369 Check: 2355 Weight: 1.00 Name: ENSBTAP00000019562/1-1094 Len: 1369 Check: 7570 Weight: 1.00 // 1 50 ENSTTRP00000015563/1-1177 ---------- ---------- ---------- ---------- ---------- BACU008131/1-1115 ---------- ---------- ---------- ---------- ---------- bmy_03928T0/1-1366 MPRASPWGRI ERYPTSRAER QEEKRLQVGK GRSQGSVRPL QETASSPKLR ENSP00000267064/1-1214 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019562/1-1094 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015563/1-1177 ---------- ---------- ---------- ---------- ---------- BACU008131/1-1115 ---------- ---------- ---------- ---------- ---------- bmy_03928T0/1-1366 PLPPPPPGRP PGSAPRPALR RRRVRPAGRG RCAGRGQPRR REAAAAAAAG ENSP00000267064/1-1214 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019562/1-1094 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015563/1-1177 ---------- ---------- ---------- ---------- ---------- BACU008131/1-1115 ---------- ---------- ---------- ---MDERKEL LAERGPGFLG bmy_03928T0/1-1366 GGGRRAEEEA GAELSGAGGG GARAREDGGA EEGRRPQREV LRGRGH-RDP ENSP00000267064/1-1214 ---------- ---------- MAVRKKDGGP NVKYYEAADT VTQ----FDN ENSBTAP00000019562/1-1094 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015563/1-1177 ---------K KYIQAEPPTN KSLSSLVVQL LQFQEEVFGK HVSNAPLTKL BACU008131/1-1115 IKGSVGLEMG KYIQAEPPTN KSLSSLVVQL LQFQEEVFGK HVSNAPLTKL bmy_03928T0/1-1366 VRQRAALARQ ELQEAEPPTN KSLSSLVVQL LQFQEEVFGK HVSNAPLTKL ENSP00000267064/1-1214 VRLWLGKNYK KYIQAEPPTN KSLSSLVVQL LQFQEEVFGK HVSNAPLTKL ENSBTAP00000019562/1-1094 ---------- QYIQAEPPTN KSLSSLVVQL LQFQEEVFGK HVSNAPLTKL 201 250 ENSTTRP00000015563/1-1177 PIKCFLDFKA GGSLCHILAA AYKFKSDQGW RRYDFQNPSR MDRNVEMFMT BACU008131/1-1115 PIKCFLDFKA GGSLCHILAA AYKFKSDQGW RRYDFQNPSR MDRNVEMFMT bmy_03928T0/1-1366 PIKCFLDFKA GGSLCHILAA AYKFKSDQGW RRYDFQNPSR MDRNVEMFMT ENSP00000267064/1-1214 PIKCFLDFKA GGSLCHILAA AYKFKSDQGW RRYDFQNPSR MDRNVEMFMT ENSBTAP00000019562/1-1094 PIKCFLDFKA GGSLCHILAA AYKFKSDQGW RRYDFQNPSR MDRNVEMFMT 251 300 ENSTTRP00000015563/1-1177 IEKSLVQNNC LSRPNIFLCP EIEPKLLGKL KDIIKRHQXX XXXXXXXXXX BACU008131/1-1115 IEKSLVQNNC LSRPNIFLCP EIEPKLLGKL KDIVKRHQGT VTEDKNNASH bmy_03928T0/1-1366 IEKSLVQNNC LSRPNIFLCP EIEPKLLGKL KDIIKRHQGT VTEDKNNASH ENSP00000267064/1-1214 IEKSLVQNNC LSRPNIFLCP EIEPKLLGKL KDIIKRHQGT VTEDKNNASH ENSBTAP00000019562/1-1094 IEKSLVQNNC LSRPNIFLCP EIEPKLLGKL KDIIKRHQGT VTEDKNSASH 301 350 ENSTTRP00000015563/1-1177 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXYDTWI PASEIEASVE BACU008131/1-1115 VVYPVPGNLE EEEWVRPVMK RDKQVLLHWG YYPDSYDTWI PASEIEASVE bmy_03928T0/1-1366 VVYPVPGNLE EEEWVRPVMK RDKQVLLHWG YYPDSYDTWI PASEIEASVE ENSP00000267064/1-1214 VVYPVPGNLE EEEWVRPVMK RDKQVLLHWG YYPDSYDTWI PASEIEASVE ENSBTAP00000019562/1-1094 VVYPVPGNLE EEEWVRPVMK RDKQVLLHWG YYPDSYDTWI PASEIEASVE 351 400 ENSTTRP00000015563/1-1177 DAPTPEKPRK VHAKWILDTD TFNEWMNEED YEVNDDKNPV SRRKKISAKT BACU008131/1-1115 DAPTPEKPRK VHAKWILDTD TFNEWMNEED YEVNDDKNPV SRRKKISAKT bmy_03928T0/1-1366 DAPTPEKPRK VHAKWILDTD TFNEWMNEED YEVNDDKNPV SRRKKISAKT ENSP00000267064/1-1214 DAPTPEKPRK VHAKWILDTD TFNEWMNEED YEVNDDKNPV SRRKKISAKT ENSBTAP00000019562/1-1094 DAPTPEKPRK VHAKWILDTD TFNEWMNEED YEVNDDKNPV SRRKKISAKT 401 450 ENSTTRP00000015563/1-1177 LTDEVNSPDS DRRDKKGGNY KKRKRSPSPS PTPEAKKKNA KKGPSTPYTK BACU008131/1-1115 LTDEVNSPDS DRRDKKGGNY KKRKRSPSPS PTPEAKKKNA KKGPSTPYTK bmy_03928T0/1-1366 LTDEVNSPDS DRRDKKGGNY KKRKRSPSPS PTPEAKKKNA KKGPSTPYTK ENSP00000267064/1-1214 LTDEVNSPDS DRRDKKGGNY KKRKRSPSPS PTPEAKKKNA KKGPSTPYTK ENSBTAP00000019562/1-1094 LTDEVNSPDS DRRDKKGGNY KKRKRSPSPS PTPEAKKKNA KKGPSTPYTK 451 500 ENSTTRP00000015563/1-1177 SKRGHREEEQ EDLTKDMDEP SPVPNVEEVT LPKTVNTKKD SESAPXXXXX BACU008131/1-1115 SKRGHREEEQ EDLTKDMDEP SPVPNVEEVT LPKTVNTKKD SESAPVKGGT bmy_03928T0/1-1366 SKRGHREEEQ EDLTKDMDEP SPVPNVEEVT LPKTVNTKKD SESAPVKGGT ENSP00000267064/1-1214 SKRGHREEEQ EDLTKDMDEP SPVPNVEEVT LPKTVNTKKD SESAPVKGGT ENSBTAP00000019562/1-1094 SKRGHREEEQ EDLTKDMDEP SPVPNVEEVT LPKTVNTKKD SESAPVKGGT 501 550 ENSTTRP00000015563/1-1177 XXXXXXXXXX XXXXXXXDED ENSTGNKGEQ TKNPDLHEDN VTEQTHHIII BACU008131/1-1115 MTDLDEQEDE SMETTGKDED ENSTGNKGEQ TKNPDLHEDN VTEQTHHIII bmy_03928T0/1-1366 MTDLDEQEDE SMETTGKDED ENSTGNKGEQ TKNPDLHEDN VTEQTHHIII ENSP00000267064/1-1214 MTDLDEQEDE SMETTGKDED ENSTGNKGEQ TKNPDLHEDN VTEQTHHIII ENSBTAP00000019562/1-1094 MTDLDEQEDE SMETTGKDED ESSTGNKGEQ TKNPDLHEDN VTEQTHHIII 551 600 ENSTTRP00000015563/1-1177 PSYAAWFDYN SVHAIERRAL PEFFNGKNKS KTPEIYLAYR NFMIDTYRLN BACU008131/1-1115 PSYAAWFDYN SVHAIERRAL PEFFNGKNKS KTPEIYLAYR NFMIDTYRLN bmy_03928T0/1-1366 PSYAAWFDYN SVHAIERRAL PEFFNGKNKS KTPEIYLAYR NFMIDTYRLN ENSP00000267064/1-1214 PSYAAWFDYN SVHAIERRAL PEFFNGKNKS KTPEIYLAYR NFMIDTYRLN ENSBTAP00000019562/1-1094 PSYAAWFDYN SVHAIERRAL PEFFNGKNKS KTPEIYLAYR NFMIDTYRLN 601 650 ENSTTRP00000015563/1-1177 PQEYLTSTAC RRNLAGDVCA IMRVHAFLEQ WGLINYQVDA ESRPTPMGPP BACU008131/1-1115 PQEYLTSTAC RRNLAGDVCA IMRVHAFLEQ WGLINYQVDA ESRPTPMGPP bmy_03928T0/1-1366 PQEYLTSTAC RRNLAGDVCA IMRVHAFLEQ WGLINYQVDA ESRPTPMGPP ENSP00000267064/1-1214 PQEYLTSTAC RRNLAGDVCA IMRVHAFLEQ WGLINYQVDA ESRPTPMGPP ENSBTAP00000019562/1-1094 PQEYLTSTAC RRNLAGDVCA IMRVHAFLEQ WGLINYQVDA ESRPTPMGPP 651 700 ENSTTRP00000015563/1-1177 PTSHFHVLAD TPSGLVPLQP KTPQ------ ---------- ---------- BACU008131/1-1115 PTSHFHVLAD TPSGLVPLQP KTPQGRQVDA DTKAGRKGKE LDDLVPETAK bmy_03928T0/1-1366 PTSHFHVLAD TPSGLVPLQP KTPQGRQVDA DTKAGRKGKE LDDLVPETAK ENSP00000267064/1-1214 PTSHFHVLAD TPSGLVPLQP KTPQ------ ---------- ---------- ENSBTAP00000019562/1-1094 PTSHFHVLAD TPSGLVPLQP KTPQGRQVDA DTKAGRKGKE LDDLVPETAK 701 750 ENSTTRP00000015563/1-1177 -----QTSAS QQMLNFPDKG KEKPTDMQNF GLRTDMYTKK NVPSKSKAAA BACU008131/1-1115 GKPELQTSAS QQMLNFPDKG KEKPTDMQNF GLRTDMYTKK NVPSKSKAAA bmy_03928T0/1-1366 GKPELQTSAS QQMLNFPDKG KEKPTDMQNF GLRTDMYTKK NVPSKSKAAA ENSP00000267064/1-1214 -----QTSAS QQMLNFPDKG KEKPTDMQNF GLRTDMYTKK NVPSKSKAAA ENSBTAP00000019562/1-1094 GKPELQNSAS QQMLNFPDKG KEKPTDMQNF GLRTDMYTKK NVPSKSKAAA 751 800 ENSTTRP00000015563/1-1177 SATREWTEQE TLLLLEALEM YKDDWNKVSE HVGSRTQDEC ILHFLRLPIE BACU008131/1-1115 SATREWTEQE TLLLLEALEM YKDDWNKVSE HVGSRTQDEC ILHFLRLPIE bmy_03928T0/1-1366 SATREWTEQE TLLLLEALEM YKDDWNKVSE HVGSRTQDEC ILHFLRLPIE ENSP00000267064/1-1214 SATREWTEQE TLLLLEALEM YKDDWNKVSE HVGSRTQDEC ILHFLRLPIE ENSBTAP00000019562/1-1094 SATREWTEQE TLLLLEALEM YKDDWNKVSE HVGSRTQDEC ILHFLRLPIE 801 850 ENSTTRP00000015563/1-1177 DPYLEDSEAS LGPLAYQPIP FSQSGNPVMS TVAFLASVVD PRVASAAAKS BACU008131/1-1115 DPYLEDSEAS LGPLAYQPIP FSQSGNPVMS TVAFLASVVD PRVASAAAKS bmy_03928T0/1-1366 DPYLEDSEAS LGPLAYQPIP FSQSGNPVMS TVAFLASVVD PRVASAAAKS ENSP00000267064/1-1214 DPYLEDSEAS LGPLAYQPIP FSQSGNPVMS TVAFLASVVD PRVASAAAKS ENSBTAP00000019562/1-1094 DPYLEDSEAS LGPLAYQPIP FSQSGNPVMS TVAFLASVVD PRVASAAAKS 851 900 ENSTTRP00000015563/1-1177 ALEEFSKMKE EVPTALVEAH VRKVEEAAKV TGKADPAFGL ESSGIAGTTS BACU008131/1-1115 ALEEFSKMKE EVPTALVEAH VRKVEEAAKV TGKADPAFGL ESSGIAGTTS bmy_03928T0/1-1366 ALEEFSKMKE EVPTALVEAH VRKVEEAAKV TGKADPAFGL ESSGIAGTTS ENSP00000267064/1-1214 ALEEFSKMKE EVPTALVEAH VRKVEEAAKV TGKADPAFGL ESSGIAGTTS ENSBTAP00000019562/1-1094 ALEEFSKMKE EVPTALVEAH VRKVEEAAKV TGKADPAFGL ESSGIAGTTS 901 950 ENSTTRP00000015563/1-1177 DEPERIEESG TDEARAEGQA TEEKKEPKEP REGVGAIEEE AKEKTSEAPK BACU008131/1-1115 DEPERIEESG TDEARAEGQA TEEKKEPKEP REGVGAIEEE AKEKTSEAPK bmy_03928T0/1-1366 DEPERIEESG TDEARAEGQA TEEKKEPKEP REGVGAIEEE AKEKTSEAPK ENSP00000267064/1-1214 DEPERIEESG NDEARVEGQA TDEKKEPKEP REGGGAIEEE AKEKTSEAPK ENSBTAP00000019562/1-1094 DEPERIEESG TDEARAEGQA TEDKKEPKEP REGVGTVEEE AKEKTSEAPK 951 1000 ENSTTRP00000015563/1-1177 KDDEKGKDGD SEKESEKSDG DPIVDPEKEK EPKEGQEEVL KEVVESEGER BACU008131/1-1115 KDDEKGKDGD SEKESEKSDG DPIVDPEKEK EPKEGQEEVL KEVVESEGER bmy_03928T0/1-1366 KDDEKGKDGD SEKESEKSDG DPIVDPEKEK EPKEGQEEVL KEVVESEGER ENSP00000267064/1-1214 KDEEKGKEGD SEKESEKSDG DPIVDPEKEK EPKEGQEEVL KEVVESEGER ENSBTAP00000019562/1-1094 KDDEKGKDGD SEKESEKSDG DPTADPEKEK EPKEGQEEVL KEVVESEGER 1001 1050 ENSTTRP00000015563/1-1177 KTKVERDIGE GNLSTAAAAA LAAAAVKAKH LAAVEERKIK SLVALLVETQ BACU008131/1-1115 KTKVERDIGE GNLSTAAAAA LAAAAVKAKH LAAVEERKIK SLVALLVETQ bmy_03928T0/1-1366 KTKVERDIGE GNLSTAAAAA LAAAAVKAKH LAAVEERKIK SLVALLVETQ ENSP00000267064/1-1214 KTKVERDIGE GNLSTAAAAA LAAAAVKAKH LAAVEERKIK SLVALLVETQ ENSBTAP00000019562/1-1094 KTKVERDIGE GNLSTAAAAA LAAAAVKAKH LAAVEERKIK SLVALLVETQ 1051 1100 ENSTTRP00000015563/1-1177 MKKLEIKLRH FEELETIMDR EREALEYQRQ QLLADRQAFH MEQLKYAEMR BACU008131/1-1115 MKKLEIKLRH FEELETIMDR EREALEYQRQ QLLADRQAFH MEQLKYAEMR bmy_03928T0/1-1366 MKKLEIKLRH FEELETIMDR EREALEYQRQ QLLADRQAFH MEQLKYAEMR ENSP00000267064/1-1214 MKKLEIKLRH FEELETIMDR EREALEYQRQ QLLADRQAFH MEQLKYAEMR ENSBTAP00000019562/1-1094 MKKLEIKLRH FEELETIMDR EREALEYQRQ QLLADRQAFH MEQLKYAEMR 1101 1150 ENSTTRP00000015563/1-1177 ARQQHFQQMH QQQQPPPQAL PPGSQPVPPA GAAGPPAVHG LALAPASMAP BACU008131/1-1115 ARQQHFQQMH QQQQPPPQTL PPGSQPVPPA GAAGPPAVHG LALAPASVAP bmy_03928T0/1-1366 ARQQHFQQMH QQQQPPPQAL PPGSQPVPPA GAAGPPAVHG LALAPASVAP ENSP00000267064/1-1214 ARQQHFQQMH QQQQQPPPAL PPGSQPIPPT GAAGPPAVHG LAVAPASVVP ENSBTAP00000019562/1-1094 ARQQHFQQMH QQQQQPPPAL PPGSQPIPPP GAAGPPTVHG LAMAPASVAP 1151 1200 ENSTTRP00000015563/1-1177 ASAGSGAPPG SLGPSEQIGQ AGSTAVPQQQ QTAGAPQPGA VPPGVPPPGP BACU008131/1-1115 ASAGSGAPPG SLGPSEQIGQ AGSTAVPQQQ QAAGAPQPGA VPPGVPPPGP bmy_03928T0/1-1366 ASAGSGAPPG SLGPSEQIGQ AGSTAVPQQQ QAAGAPQPGA VPPGVPPPGP ENSP00000267064/1-1214 APAGSGAPPG SLGPSEQIGQ AGSTAGPQQQ QPAGAPQPGA VPPGVPPPGP ENSBTAP00000019562/1-1094 APAGSGAPPG SLGPSEQLGQ AGSTVGPQQQ PPAGAPQPGA VPPGVPPPGP 1201 1250 ENSTTRP00000015563/1-1177 HGPSPFPNQQ TPPSMMPGAV PGSGHPGVAG NAPLGLPFGM --PPPPPAPS BACU008131/1-1115 H--------- ---------- ---------- ---------- ---------- bmy_03928T0/1-1366 HGPSPFPNQQ TPPSMMPGAV PGSGHPGVAG NAPLGLPFGM --PPPPPAPS ENSP00000267064/1-1214 HGPSPFPNQQ TPPSMMPGAV PGSGHPGVAG NAPLGLPFGM PPPPPPPAPS ENSBTAP00000019562/1-1094 HGPSPFPNQQ TPPSMMPGAV PGSGHPGVA- ---------- ---------- 1251 1300 ENSTTRP00000015563/1-1177 IIPFGSLADS ISINLPPPPN LHGHHHHLPF APATLPPPNL PVSMANPLHP BACU008131/1-1115 ---------- ---------- ---------- ---------- ---------- bmy_03928T0/1-1366 IIPFGSLADS ISINLPPPPN LHGHHHHLPF APATLPAPNL PVSMANPLHP ENSP00000267064/1-1214 IIPFGSLADS ISINLPAPPN LHGHHHHLPF APGTLPPPNL PVSMANPLHP ENSBTAP00000019562/1-1094 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSTTRP00000015563/1-1177 NLPATTTMPS SLPLGPGLGS AAAQSPAIVA AVQGNLLPSA SPLPDPGTPL BACU008131/1-1115 ---------- ---------- --AQSPAIVA AVQGNLLPSA SPLPDPGAPL bmy_03928T0/1-1366 NLPATTTMPS SLPLGPGLGS AAAQSPAIVA AVQGNLLPSA SPLPDPGTPL ENSP00000267064/1-1214 NLPATTTMPS SLPLGPGLGS AAAQSPAIVA AVQGNLLPSA SPLPDPGTPL ENSBTAP00000019562/1-1094 ---------- ---------- ---------- ---------- ----DPGTPL 1351 1400 ENSTTRP00000015563/1-1177 PPDPTAPSPG TVTPVPPTQ BACU008131/1-1115 PPDPTAPSPG TVTPVPPTQ bmy_03928T0/1-1366 PPDPTAPSPG TVTPVPPTQ ENSP00000267064/1-1214 PPDPTAPSPG TVTPVPPPQ ENSBTAP00000019562/1-1094 PPDPTAPSPG TVTPVPPPQ