KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:08:27 2014 Check: 00 ..
Name: BACU014650/1-488 Len: 528 Check: 6094 Weight: 1.00
Name: bmy_20065T0/1-454 Len: 528 Check: 9576 Weight: 1.00
Name: ENSTTRP00000003318/1-528 Len: 528 Check: 9872 Weight: 1.00
Name: ENSP00000273130/1-523 Len: 528 Check: 7197 Weight: 1.00
Name: ENSBTAP00000019566/1-524 Len: 528 Check: 3997 Weight: 1.00
//
1 50
BACU014650/1-488 MAAVGRVGSF GSSPGGLTST YTGGPLANEL TSGNGGAAAG DDEDGQNLWS
bmy_20065T0/1-454 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000003318/1-528 MAAVGRVGSF GSSSAGLTST YTGGPLANEL TSGNGGAAAG DDEDGQNLWS
ENSP00000273130/1-523 MAAVGRVGSF GSSPPGLSST YTGGPLGNEI ASGNGGAAAG DDEDGQNLWS
ENSBTAP00000019566/1-524 MAAVGRVGSF GSCPPGLTAT YTGGPLANEL ASGNGAAAAG DDEDGQNLWS
51 100
BACU014650/1-488 CILSEVSTRS RSKLPAGKNV LLLGEDGAGK TSLIRKIQGI EEYKKGRGLE
bmy_20065T0/1-454 -------MRL NKRSRDTKRE NPGGEDGAGK TSLIRKIQGI EEYKKGRGLE
ENSTTRP00000003318/1-528 CPLSEVSTRL RSKLPAXXXX XXXXEDGAGK TSLIRKIQGI EEYKKGRGLE
ENSP00000273130/1-523 CILSEVSTRS RSKLPAGKNV LLLGEDGAGK TSLIRKIQGI EEYKKGRGLE
ENSBTAP00000019566/1-524 CILSEVSTRS RSKLPAGKNV LLLGEDGAGK TSLIRKIQGI EEYKKGRGLE
101 150
BACU014650/1-488 YLYLNVHDED RDDQTRCNVW ILDGDPYHKG LLKFSLDAIS LKDTLVMLVV
bmy_20065T0/1-454 YLYLNVHDED RDDQTRCNVW ILDGDPYHKG LLKFSLDAIS LKDTLVTLVV
ENSTTRP00000003318/1-528 YLYLNVHDED RDDQTRCNVW ILDGDPYHKG LLKFSLDAIS LKDTLVTLVV
ENSP00000273130/1-523 YLYLNVHDED RDDQTRCNVW ILDGDLYHKG LLKFSLDAVS LKDTLVMLVV
ENSBTAP00000019566/1-524 YLYLNVHDED RDDQTRCNVW ILDGDPYHKG LLKFSLDAIS LKDTLVMLVV
151 200
BACU014650/1-488 DMSKPWTALD SLQKWASVVR EHIDKLKIPP EEMKEMEQKL IRDFQEYVEP
bmy_20065T0/1-454 DLSKPWTALD SLQKWASVVR EHIDKLKIPP EEMKEMEQKL IRDFQEYVEP
ENSTTRP00000003318/1-528 DMSKPWTALD SLQKWASVVR EHIDKLKIPP EEMKEMEQKL IRDFQEYVEP
ENSP00000273130/1-523 DMSKPWTALD SLQKWASVVR EHVDKLKIPP EEMKQMEQKL IRDFQEYVEP
ENSBTAP00000019566/1-524 DMSKPWTALD SLQKWASVVR EHIDKLKIPP EEMKEMEQKL VRDFQEYVEP
201 250
BACU014650/1-488 GEDFPASPQR RNTASQEDKD DSVVLPLGAD TLTQNLGIPV LVVCTKCDAI
bmy_20065T0/1-454 GEDFPASPQR RNTASQEDKD DSVVLPLGAD TLTQNLGIPV LVVCTKCDAI
ENSTTRP00000003318/1-528 GEDFPASPQR RTTASQEDKD DSVVLPLGAD TLTQNLGIPV LVVCTKCDAI
ENSP00000273130/1-523 GEDFPASPQR RNTASQEDKD DSVVLPLGAD TLTHNLGIPV LVVCTKCDAI
ENSBTAP00000019566/1-524 GEDFPASPQR RSTASQEDRD DSVLLPLGAD TLTQNLGVPV LVVCTKCDAI
251 300
BACU014650/1-488 SVLEKEHDYR DEHFDFIQSH IRKFCLQ--- ---------- ------FRWC
bmy_20065T0/1-454 SVLEKEHDYR DEHFDFIQSH IRKFCLQYGA ALIYTSVKEN KNIDLVYKYI
ENSTTRP00000003318/1-528 SVLEKEHDYR DEHFDFIQSH IRKFCLQYGA ALIYTSVKEN KNIDLVYKYI
ENSP00000273130/1-523 SVLEKEHDYR DEHFDFIQSH IRKFCLQYGA ALIYTSVKEN KNIDLVYKYI
ENSBTAP00000019566/1-524 SVLEKEHDYR DEHFDFIQSH IRKFCLQYGA ALIYASVKEN KNIDLVYKYI
301 350
BACU014650/1-488 TIIIISFSFE VRP--VDFSM MSSPAGWDND KKIGILHENF QMLKAEDNFE
bmy_20065T0/1-454 VQKLYGFPYK IPAIVVEKDA VFIPAGWDND KKIGILHENF QMLKAEDNFE
ENSTTRP00000003318/1-528 VQKLYGFPYK IPAIVVEKDA VFIPAGWDND KKIGILHENF QMLKAEDNFE
ENSP00000273130/1-523 VQKLYGFPYK IPAVVVEKDA VFIPAGWDND KKIGILHENF QTLKAEDNFE
ENSBTAP00000019566/1-524 VQKLYGFPYK IPAVVVEKDA VFIPAGWDND KKIGILHENF QTLKAEDNFE
351 400
BACU014650/1-488 DIITKPPVRK FVHEKEIVAE DDQVFLMKLQ ---------- -----DASPR
bmy_20065T0/1-454 DIITKPPVRK FVHEKEIVAE DDQVFLMKLQ SLLAKQPPTA AGRPVDASPR
ENSTTRP00000003318/1-528 DIITKPPVRK FVHEKEIVAE DDQVFLMKLQ SLLAKQPPTA AGRPVDASPR
ENSP00000273130/1-523 DIITKPPVRK FVHEKEIMAE DDQVFLMKLQ SLLAKQPPTA AGRPVDASPR
ENSBTAP00000019566/1-524 DIITKPPVRK FVHEKEIMAE DDQVFLMKLQ SLLAKQPPTA AGRPVDASPR
401 450
BACU014650/1-488 VPGGSPRTPN RSVSSNVASV SPIPAGSKKI DPNMKAGATS EGVLANFFNS
bmy_20065T0/1-454 VPGGSPRTPN RSVSSNVASV SPIPAGSKKI DPNMKAGATS EGVLANFFNS
ENSTTRP00000003318/1-528 VPGGSPRTPN RSVSSNVASV SPIPAGSKKI DPNMKAGATS EGVLANFFNS
ENSP00000273130/1-523 VPGGSPRTPN RSVSSNVASV SPIPAGSKKI DPNMKAGATS EGVLANFFNS
ENSBTAP00000019566/1-524 VPGGSPRTPN RSVSSNVASV SPIPAGSKKI DPNMKAGATS EGVLANFFNS
451 500
BACU014650/1-488 LLSKKTGSPG GSGVGGGSPG GGAG----GG SSGLPPSAKK SGQKPVLSDV
bmy_20065T0/1-454 LLSKKTGSPG GSGVGGGSPG GGAG------ ---------- -GQKPVLSDV
ENSTTRP00000003318/1-528 LLSKKTGSPG GPGVGGGSPG GGAGGGAGGG SSGLPPSAKK SGQKPVLSDV
ENSP00000273130/1-523 LLSKKTGSPG GPGVSGGSPA GGAG----GG SSGLPPSTKK SGQKPVL-DV
ENSBTAP00000019566/1-524 LLSKKTGSPG GPGVGGGSPG GGAA----GG GGGLPPSAKK SGQKPVLSDV
501 550
BACU014650/1-488 HAELDRIARK PVTASPAAPT SPTEGEAS
bmy_20065T0/1-454 HAELDRIARK PVTASPTAPT SPTEGEAS
ENSTTRP00000003318/1-528 HAELDRIARK PVTASPATPA SPTEGEAS
ENSP00000273130/1-523 HAELDRITRK PVTVSPTTPT SPTEGEAS
ENSBTAP00000019566/1-524 HAELDRIARK PVTVSTTTPT SPAEGEAS