KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:08:28 2014 Check: 00 .. Name: ENSP00000440626/1-250 Len: 899 Check: 9614 Weight: 1.00 Name: ENSTTRP00000011897/1-275 Len: 899 Check: 2175 Weight: 1.00 Name: bmy_07959T0/1-460 Len: 899 Check: 4551 Weight: 1.00 Name: ENSBTAP00000019581/1-896 Len: 899 Check: 2713 Weight: 1.00 // 1 50 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019581/1-896 MDVVGENEAL QQFFEAQGAN GTLGNPTLDT SLLEEFLGND FDLGALQGQL 51 100 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 ----MVRKRG LSHLCVPPGA CCPTLTPAAG GTPAAFLHSA AAPGMLPAHL ENSBTAP00000019581/1-896 PDTPPYSASD SCSPPQVKGA CCPTLTPAAR GTPAALLHSA NAPGILPAHQ 101 150 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- -------MAF ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- -------MAL bmy_07959T0/1-460 PQGSSDMSDS AHSHSAFHNC YPDARHLRTP LDQSVSSHLG TGCSYHPQPL ENSBTAP00000019581/1-896 SHSSSEMSNS GLPHRTFHNC YPDASHLMSP LDQSVSG--G IGCSYHQQPL 151 200 ENSP00000440626/1-250 C--------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 L--------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 CHSPGPSLPX TKKRKCTQAL EDSGDCHVWG HHSRPMTSRS HSSEVQDHDS ENSBTAP00000019581/1-896 CHSPGVSLPP TKKRKCTQVL EDSGDCHVWT HHSRPMTGRS HSIEVQDLDS 201 250 ENSP00000440626/1-250 ---------- ---------- ---------- ---------A LTIVA----- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------G LTIVS----- bmy_07959T0/1-460 ERQNMMLVDQ CSPALKWQPY RSVPWHSLLN SQYEKLPDIG YRVVTDKGFN ENSBTAP00000019581/1-896 ERQNMMLADQ PSPALKWQPY RSVPWHSLLN SQYEKLPDVG YRVVTDKGFN 251 300 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 FSPADEAFVC QKKNHFQITI HIQ------- ---------- ---------- ENSBTAP00000019581/1-896 FSPADEAFVC QKKNHFQITI HIQVWGSPKF VKTQMGLKPI EMFYLKPFGV 301 350 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 -VEATNQIIA IEQSQADRSK KIFNPVKIDL LADQVTKVTL GRLHFSETTA ENSBTAP00000019581/1-896 KVEATNQIIA IEQSQADRSK KIFNPIKINL LADQVTKVTL GRLHFSETTA 351 400 ENSP00000440626/1-250 ---------- ---------- ---------L YILS------ ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------L YILS------ ---------- bmy_07959T0/1-460 NNMRKKGKPN PDQRYFMLVV GLYAANQDQF YLLSAHVSER IIVRASNPGQ ENSBTAP00000019581/1-896 NNMRKKGKPN PDQRYFMLVV GLYAANQDQF YLLSAHISER IIVRASNPGQ 401 450 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 FENDIDALWQ RGQVPESVVC HGRVGI---- ---------- ---------- ENSBTAP00000019581/1-896 FENDIDALWQ RGQVPESVVC HGRVGINTDA PDEALVVCGN MKVMGTIMHP 451 500 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019581/1-896 SDSRAKQNVQ EVDTNEQLRR IAQMRIVEYD YKPEFASAMG INTAHQTGMI 501 550 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019581/1-896 AQEVREILPR AVREVGDVTC ENGETLENFL MVDKDQIFME NVGAVKQLCK 551 600 ENSP00000440626/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------- ---------- bmy_07959T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019581/1-896 LTNNLEERIE ELEIWNRKLA RLKRLSSSKS SASEASSISK FSRALSASSP 601 650 ENSP00000440626/1-250 ---------- ---------- ---------- ---------L KDQDRRVPNL ENSTTRP00000011897/1-275 ---------- ---------- ---------- ---------L KDQDRCTPSL bmy_07959T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019581/1-896 KRTISKKNSK VSFSGKKQSC PNWVFQSLVI TLIAVMAFCL KDQDRCTPSA 651 700 ENSP00000440626/1-250 PPSNITSSQE PALLPTASSS APNTSLVTTP ASLQVPEITF CEILPCQETY ENSTTRP00000011897/1-275 PLSNLTSSQD PALPPTASPL APNTSLATTQ PPFQVPEITF CEILPCQETY bmy_07959T0/1-460 ---------- -------NTD APDEALVV-- ---------- CGNMKVMGTI ENSBTAP00000019581/1-896 PSSNLTSSQE PALPSTASPS APNTTLATTL PSFQVPEITF CEILPCQQTY 701 750 ENSP00000440626/1-250 CCPIRGMKEV SSSPVQRQSE EKEFHQRRWS EDKSKSVLAR NALSGPDWES ENSTTRP00000011897/1-275 CCPNWGTRRV LSSPVQRQPK EKEPHQRPWA GDRSTSFLAG QALTNLDWGS bmy_07959T0/1-460 MHP------- SDSRAKQNIQ EVDTNEQ--- ---------- ---------- ENSBTAP00000019581/1-896 CCPIWGTRRG LSSPMQRQLE EQEPHQGPWA G-RSTSFLAA EAQTNVDWRS 751 800 ENSP00000440626/1-250 DWIDTTISSI QIMEIQQIID HQYCIQSLQC G--------- ---------- ENSTTRP00000011897/1-275 DWIDTTISSI QIMEIQQIID RRYCSRSLQC GSGNYNYHIP VNKYTPTNVK bmy_07959T0/1-460 ---------L RRIAQMRIVE YDYKPE---- ---------- ---------- ENSBTAP00000019581/1-896 DWIDTTISSI QIMEIQQIID RRYCSRSLQC GSGNYYYHIP VNKYTPTNVK 801 850 ENSP00000440626/1-250 ------TTEP LIVFQCKFTL GNICFHSKRG TKGLESHREI SQEMTQGYQH ENSTTRP00000011897/1-275 FSLEINTTEP LIVFQCKFTL GSMCFHSKRE AKGMQSHQEV SQEMTQGYQH bmy_07959T0/1-460 ---------- ---------- ----FASAMG INTAHQTGMI AQEVQE---- ENSBTAP00000019581/1-896 FSLEINTTEP LIVFQCKFTL GNMCFRSKIE AKGMESQQEV SQEMTQGYQH 851 900 ENSP00000440626/1-250 IWSLPVAPFS DSMFHFRVAA PDLADCSTDP YFAGIFFTDY FFYFYRRCA ENSTTRP00000011897/1-275 IWSLPAAPFF DSAYHFRVAA PDLADCSTDP YFAGIFFTDY FFYFYRHCV bmy_07959T0/1-460 --ILPRA--- -------VRE VGHVTCENGE MLENFLMVDK -VTLNRYLP ENSBTAP00000019581/1-896 IWSLPVAPLF DSGYHFRVAA PDLADCSTDP YFAGKFFTDY FFYFYRHCV