KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:30 2014 Check: 00 .. Name: ENSP00000342499/1-516 Len: 530 Check: 6286 Weight: 1.00 Name: ENSBTAP00000019587/1-496 Len: 530 Check: 6434 Weight: 1.00 Name: ENSTTRP00000000473/1-514 Len: 530 Check: 8123 Weight: 1.00 Name: bmy_20757T0/1-528 Len: 530 Check: 5832 Weight: 1.00 Name: BACU017561/1-528 Len: 530 Check: 5103 Weight: 1.00 // 1 50 ENSP00000342499/1-516 MPSSTSPDQG -DDLENCILR FSDLDLKDMS LINPSSSLKA ELDGSTKKKY ENSBTAP00000019587/1-496 MPSSTSPDQG DDDLEACVLR FSDLDLKDTS LMNPSSSLKA ELDVSAKKKY ENSTTRP00000000473/1-514 MPSSTSPDQG -DDLEACVLR FSDLDLKDTS LINPSSSIKA ELDVSTKKKY bmy_20757T0/1-528 MPSSTSPDQG -DDLEACVLR FSDLDLKDTS LINPSSSIKA ELDVSTKKKY BACU017561/1-528 MPSSTSPDQG -DDLEACVLR FSDLDLKDTS LINPSSSIKA ELDVSTKKKY 51 100 ENSP00000342499/1-516 SFAKKKAFAL FVKTKEVPTK RSFECKEKLW KCCRQLFTDQ TSIHRHVATQ ENSBTAP00000019587/1-496 SFAKKKAFSL FVKTKEVPAP PC-ECKEKWW KCCQQLFTDP TSIHRHVATQ ENSTTRP00000000473/1-514 SFAKKKAFAL FVKTKELPAP PS-EYKEKWW KCCQQLFTDQ TSIHRHVATQ bmy_20757T0/1-528 SFAKKKAFAL FVKTKELPAP PS-EYKEKWW KCCQQLFTDQ TSIHRHVATQ BACU017561/1-528 SFAKKKAFAL FVKTKELPAP PS-EYKEKWW KCCQQLFTDQ TSIHRHVATQ 101 150 ENSP00000342499/1-516 HADEIYHQTA SILKQLAVTL STSKSLSSAD EKNPLKECLP HSHDVSAWLP ENSBTAP00000019587/1-496 HANEICHETA SVLKQLAVTS STSKSLESTD KRNPFKEDFT RNQEVSTWLP ENSTTRP00000000473/1-514 HADEIYRETA SVLKQLTVTS STSKTLKSAD KRNPFKEDLT HNHEVSAWLP bmy_20757T0/1-528 HADEIYHETA SVLKQLTVTS STSKTLKSAD KRNPFKEDLT HNHEVSAWLP BACU017561/1-528 HADEIYHETA SVLKQLTVTS STSKTLKPAD KRNPFKEDLT HNHEVSAWLP 151 200 ENSP00000342499/1-516 DISCFNPDEL ISGQGSEEGE VLLYYCYHDL EDPQWICAWQ TALCQHLHLT ENSBTAP00000019587/1-496 DISCFNPDEL ISGQGNDEGE VLLYYCYCDL KDPDWVCAWQ TALCQHLHLT ENSTTRP00000000473/1-514 DISCFSPDEL LSGHSNGEGE VLLYYCYCDL EDPDWICAWQ TALCQHLHLT bmy_20757T0/1-528 DISCFSPDEL ISGQGNGEGE VLLYYCYCDL EDPDWICAWQ TALCQHLHLT BACU017561/1-528 DISCFSPDEL ISGQGNGEGE VLLYYCYCDL EDPDWICAWQ TALCQHLHLT 201 250 ENSP00000342499/1-516 GKIRIAAEGI NGTVGGSKLA TRLYVEVMLS FPLFKDDLCK DDFKTSKGGA ENSBTAP00000019587/1-496 GKVRIATEGI NGTVGGSRLA TRLYVSVMLS CPLFKDYLCK DDFKTSKGGA ENSTTRP00000000473/1-514 GKVRIATEGI NGTVGGSKLA TRLYVEVMLS CPLFKDYLCK DDFKTSKGGA bmy_20757T0/1-528 GKVRIATEGI NGTVGGSKLA TRLYVEVMLS CPLFKDYLCK DDFKTSKGGA BACU017561/1-528 GKVRIATEGI NGTVGGSKLA TRLYVEVMLS CPLFKDYLCK DDFKTSKGGA 251 300 ENSP00000342499/1-516 HCFPELRVGV FEEIVPMGIS PKKISYKKPG IHLSPGEFHK EVEKFLSQAN ENSBTAP00000019587/1-496 CCFPELRVGV FEEIVPMGIS PNKISYKKPG IHLSPGEFHK EVEKFLSQAN ENSTTRP00000000473/1-514 CCFPELRVGV FAEIVPMGIS PSRISYKKPG IHLSPGEFHK EVEKFLSQAN bmy_20757T0/1-528 CCFPELRVGV FEEIVPMGIS PSKISYKKPG IHLSPGEFHK EVEKFLSQAN BACU017561/1-528 CCFPELRVGV FEEIVPMGIS PSKISYKKPG IHLSPGEFHK EVEKFLCQAN 301 350 ENSP00000342499/1-516 QEQSDTILLD CRNFYESKIG RFQGCLAPDI RKFSYFPSYV DKNLELFREK ENSBTAP00000019587/1-496 QEESDTILLD CRNFYESKIG RFQGCLAPDI RKFSYFPSYV DENLELFKEK ENSTTRP00000000473/1-514 QEESDTILLD CRNFYESKIG RFQGCLAPDI RKFSYFPSYV DENLELFKEK bmy_20757T0/1-528 QEESDTILLD CRNFYESKIG RFQGCLAPDI RKFSYFPSYV DENLELFKEK BACU017561/1-528 QEESDTILLD CRNFYESKIG RFQGCLAPDI RKFSYFPSYV DENLELFKEK 351 400 ENSP00000342499/1-516 RVLMYCTGGI RCERGSAYLK AKGVCKEVFQ LKGGIHKYLE EFPDGFYKGK ENSBTAP00000019587/1-496 RVLMYCTGGI RCERGSAYLK TKGVCKEVFQ LKGGIHKYLE EFPDGFYKGK ENSTTRP00000000473/1-514 RVLMYCTGGI RCERGSAYLK AKGVCKEVFQ LKGGIHKYLE EFPDGFYKGK bmy_20757T0/1-528 RVLMYCTGGI RCERGSAYLK AKGVCKEVFQ LKGGIHKYLE EFPAGFYKGK BACU017561/1-528 RVLMYCTGGI RCERGSAYLK AKGVCKEVFQ LKGGIHKYLE EFPAGFYKGK 401 450 ENSP00000342499/1-516 LFVFDERYAL SYNSDVVSEC SYCGARWDQY KLCSTPQCRQ LVLTCPACQG ENSBTAP00000019587/1-496 LFVFDERYAL SFNNDIVSEC SYCGVPWDHY NLCSTPQCRQ LVLTCPACQE ENSTTRP00000000473/1-514 LFVFDERYAL SFNSDIVSEC SYCGAPWDQY KLCSTPQCRQ LVLTCPACQG bmy_20757T0/1-528 LFVFDERYAL SFNSDIVSEC SYCGAPWDQY KLCSTPQCRQ LVLTCPACQG BACU017561/1-528 LFVFDERYAL SFNSDIVSEC SYCGAPWDQY KLCSTPQCRQ LILTCPACQG 451 500 ENSP00000342499/1-516 QGFTACCVTC QDKGSRKVSG PMQDSFKEEC ECTARRPRIP RELLQHVRQP ENSBTAP00000019587/1-496 RGFTACCVTC QDKGNRQAAS PAQSSFKEEC ECTARRPRVP RELSRRG--- ENSTTRP00000000473/1-514 QGFTACCVTC QDKGSRQAAS PAQSSFKEEC ECTARRLRAH RELLQQGRLP bmy_20757T0/1-528 QGFTACCVTC QDKGSRQAAS PAQSSFKEEC ECTARRLRAP RELLQQGRLP BACU017561/1-528 QGFTACCVTC QDKGSRQAAS PAQSSFKEEC ECTARRLRAP RELLQQGRLP 501 550 ENSP00000342499/1-516 VSPEPGPDAD EDGPVLM--- ---------- ENSBTAP00000019587/1-496 ---------- ---------- ---------- ENSTTRP00000000473/1-514 ASPGPRTGDD EDGPLT---- ---------- bmy_20757T0/1-528 ASPEPRPGDD EDGPCLHERP HLPFPKPSQS BACU017561/1-528 ASPEPRPGDD EDGPCLHERP HLPFPKPSQS