KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:31 2014 Check: 00 .. Name: ENSP00000266557/1-260 Len: 272 Check: 1564 Weight: 1.00 Name: ENSBTAP00000019595/1-249 Len: 272 Check: 9582 Weight: 1.00 Name: ENSTTRP00000013716/1-251 Len: 272 Check: 3786 Weight: 1.00 Name: bmy_11505T0/1-263 Len: 272 Check: 9400 Weight: 1.00 Name: BACU018229/1-250 Len: 272 Check: 1992 Weight: 1.00 // 1 50 ENSP00000266557/1-260 MARPHPWWLC VLGTLVGLSA TPAPKSCPER HYWAQGKLCC QMCEPGTFLV ENSBTAP00000019595/1-249 MARLPPCWLW VLGTLAGLSA TPDPKSCPEK HYWAQGGWCC QMCEPGTFLV ENSTTRP00000013716/1-251 MARPPPCWLW VLGPLAVLSA TPASKRCPEK HYLAQGERCC QMCEPGTFLV bmy_11505T0/1-263 MARPPPCWLW VLGTLAGLSV TPASKSCPEK HYLAQGERCC QMCEPGTFLV BACU018229/1-250 MARPPPCWLW VLGTLAGLSV TPASKSCPEK HYLAQGERCC QMCEPGTFLV 51 100 ENSP00000266557/1-260 KDCDQHRKAA QCDPCIPGVS FSPDHHTRPH CESCRHCNSG LLVRNCTITA ENSBTAP00000019595/1-249 KDCEQHREAA QCNPCTPGVS FMPDHHSRPH CESCRHCNSG LLIRNCTLTA ENSTTRP00000013716/1-251 KECDQHEKAT QCDPCTPGVS FSPDHHTRPH CESCRHCNSG LLIRNCSLTA bmy_11505T0/1-263 KECDQHEKAT QCDPCTPGVS FSPDHHTRPH CESCRHCTSG LLIRNCSLTA BACU018229/1-250 KECDQHEKAT QCDPCTPGVS FSPDHHTRPH CESCRHCTSG LLIRNCSLTA 101 150 ENSP00000266557/1-260 NAECACRNGW QCRDKECTEC DPLPNPSLTA RSSQALSPHP QPTHLPYVS- ENSBTAP00000019595/1-249 NSECACPEGQ QCRDKDCMEC D--------- GPAQAPGPHP QPSHLPYAE- ENSTTRP00000013716/1-251 NSECACPEGW QCRDKECTEC V--------- GPAQAPGPHP QPSYPPYGE- bmy_11505T0/1-263 NSECACPEGW QCRDKECTEC V--------- GPAQAPDPHP QPSHSPYAEG BACU018229/1-250 NSECACPEGW QCRDKECTEC V--------- GAAQAPDPHP QPSYSPYAE- 151 200 ENSP00000266557/1-260 ---------- -EMLEARTAG HMQTLADFRQ LPARTLSTHW PPQRSLCSSD ENSBTAP00000019595/1-249 ---------- -EIAESRTDR HTQTLANSRW LPAPTLSTHW SPQRSLCSAN ENSTTRP00000013716/1-251 ---------- -AVPEARTGQ HMRTLADSRW LPAPTLSTHW SPQRSLCSTD bmy_11505T0/1-263 KFYATLRLVI GEIPEARTGR HIRTLADSRW LPAPTLSTHW SPQRSLCSAD BACU018229/1-250 ---------- -EIPEARTGQ HIRTLADSRW LPAPTLSTHW SPQRSLCSAD 201 250 ENSP00000266557/1-260 FIRILVIFSG MFLVFTLAGA LFLHQRRKYR SNKGESPVEP AEPCHYSCPR ENSBTAP00000019595/1-249 CIRIFVLLSG MFLAFTIVGA LFLHQQRK-- LNAGESPVAP AEPCPYTCPS ENSTTRP00000013716/1-251 CIRIFVLLSG MFLAFTIVGA LFLHQQRKYR LNTREGPVAP AEPCPYSCPR bmy_11505T0/1-263 CIRIFVLLSG MFLAFTIVGA LFLHQQRKYR LNTRESPVAP AEPCPYSCPR BACU018229/1-250 CIRIFVLLSG MFLAFTIVGA LFLHQQRKYR LNMRESPVEP AEPCPYSCPR 251 300 ENSP00000266557/1-260 EEEGSTIPIQ EDYRKPEPAC SP ENSBTAP00000019595/1-249 EEEGSAIPIQ EDYRKPEPTS YF ENSTTRP00000013716/1-251 EEEGSAIPIQ EDYRKPEPAS YP bmy_11505T0/1-263 EEEGSAIPIQ EDYRKPEPAS YP BACU018229/1-250 EEEGSAIPIQ EDYRKPDPAS Y-