KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:34 2014 Check: 00 .. Name: ENSP00000349364/1-563 Len: 598 Check: 8678 Weight: 1.00 Name: ENSBTAP00000019606/1-562 Len: 598 Check: 5816 Weight: 1.00 Name: ENSTTRP00000015256/1-566 Len: 598 Check: 1136 Weight: 1.00 Name: BACU003083/1-402 Len: 598 Check: 3808 Weight: 1.00 Name: bmy_11499T0/1-562 Len: 598 Check: 3882 Weight: 1.00 // 1 50 ENSP00000349364/1-563 MNPLFGPNLF LLQQEQQGLA GPLGDSLGGD HFAGGGDLPP APLSPAGPAA ENSBTAP00000019606/1-562 MNPLFGPNLF LLQQEQQGLT GPLGDPLGGD HLAGGGDVPP APLAPAGPAP ENSTTRP00000015256/1-566 MNPLFGPNLF LLQQEQQGLA GPLGDPVGSD HLAGGGDVPP APLARAGSAS BACU003083/1-402 ---------- ---------- ---------- ---------- ---------- bmy_11499T0/1-562 MNPLFGPNLF LLQQEQQGLA GPLGDPVGSD HLAGGGDVPP APLARAGPAP 51 100 ENSP00000349364/1-563 YSPPGPGPAP PAAMALRNDL GSNINVLKTL NLRFRCFLAK VHELERRNRL ENSBTAP00000019606/1-562 YSPPGPGPAP PAAMALRNDL GSNINVLKTL NLRFRCFLAK VHELERRNRL ENSTTRP00000015256/1-566 YSPPGPGPAP PAAMALRNDL GSNINVLKTL NLRFRCFLAK VHELERRNRL BACU003083/1-402 ---------- ---------- ---------- ---------- ---------- bmy_11499T0/1-562 YSPPGPGPAP PAAMALRNDL GSNINVLKTL NLRFRCFLAK VHELERRNRL 101 150 ENSP00000349364/1-563 LEKQLQQALE EGKQGRRGLG RRDQAVQTGF VSPIRPLGLQ LGARPAAVCS ENSBTAP00000019606/1-562 LEKQLQQALE EGKQGRRGLP RRDQAVQTGF VSPVRPLGLP LGSRPAAVCT ENSTTRP00000015256/1-566 LEKQLQQALE EGKHGRRGLA RRDQAVQTGY VSPVRPLGLP LGARPAAVCT BACU003083/1-402 ---------- ---------- ---------- ---------- ---------- bmy_11499T0/1-562 LEKQLQQALE EGKQGRRGLA RRDQAVQTGF VSPVRPLGLP LGARPAAVCT 151 200 ENSP00000349364/1-563 PSARVLGSPA RSPAGPLAPS AASLSSS--S TSTSTTYSSS ARFMPGTIWS ENSBTAP00000019606/1-562 PSARVLGSPA RSPAGPLAPS AACQPAL--S TSASTAYSSS ARFMPGTIWS ENSTTRP00000015256/1-566 PSARVLGSPA RSPAGPLAPS AACHPAPSTS TSASSASSSS ARFMPGTIWS BACU003083/1-402 ---------- ---------- ---------- ---------- ---MPGTIWS bmy_11499T0/1-562 PSARVLGSPA RSPAGPLAPS AACHPAP--S TSASSACSSS ARFMPGTIWS 201 250 ENSP00000349364/1-563 FSHARRLGPG LEPTLVQGPG LSWVHPDGVG VQIDTITPEI RALYNVLAKV ENSBTAP00000019606/1-562 FSHARRLGPG LEPTLVQGPG LSWVHPDGVG VQIDTITPEI RALYNVLAKV ENSTTRP00000015256/1-566 FSHARRLGPG LEPTLVQGPG LSWVHPDGVG VQIDTITPEI RALYNVLAKV BACU003083/1-402 FSHARRLGPG LEPTLVQGPG LSWVHPDGVG VQIDTITPEI RALYNVLAKV bmy_11499T0/1-562 FSHARRLGPG LEPTLVQGPG LSWVHPDGVG VQIDTITPEI RALYNVLAKV 251 300 ENSP00000349364/1-563 KRERDEYKRR WEEEYTVRIQ LQDRVNELQE EAQEADACQE ELALKVEQLK ENSBTAP00000019606/1-562 KRERDEYKRR WEEEYTVRLQ LQERVNELQE EAQEADACQE ELAMKVEQLK ENSTTRP00000015256/1-566 KRERDEYKRR WEEEYVVRLQ LQERVNELQE EAHEADVCQE ELALKVEQL- BACU003083/1-402 KRERDEYKRR WEEEYVVRLQ LQERVNELQE EAQEADACQE ELALKVEQLK bmy_11499T0/1-562 KRERDEYKRR WEEEYVVRLQ LQERVNELQE EAQEADACQE ELALKVEQLK 301 350 ENSP00000349364/1-563 AELVVFKGLM SNNLSELDTK IQEKAMKVDM DICRRIDITA KLCDVAQQRN ENSBTAP00000019606/1-562 AELVVFKGLM SNNLTELDTK IQEKAMKVDM DICRRIDITA KLCDLAQQRN ENSTTRP00000015256/1-566 AELVVFKGLM SNNLSDLDTK IQEKAMKVDM DICRRIDITA KLCDLAQQRN BACU003083/1-402 AELVVFKGLM SNNLSDLDTK IQEKAMKVDM DICRRIDITA KLCDLAQQRN bmy_11499T0/1-562 AELVVFKGLM SNNLSDLDTK IQEKAMKVDM DICRRIDITA KLCDLAQQRN 351 400 ENSP00000349364/1-563 CEDMIQMFQK KLVPSMGGRK RERKAAVEED TSLSESEGPR QPDGDEEEST ENSBTAP00000019606/1-562 CEDMIKMFQK KLVPSMGGRK RERK-AVEED TSLAESDGPR RPDGDEEEST ENSTTRP00000015256/1-566 CEDMIKMFQK KLVPSMGGRK RERKAAVEED TSLSESDGPC HPDGDEEEST BACU003083/1-402 CEDVIKMFQ- --VPSMGGRK RERKAAVEED SSLSESDGPC HPDGDEEEST bmy_11499T0/1-562 CEDVIKMFQ- --VPSMGGRK RERKAAVEED TSLSESDGPC RPDGDEEESA 401 450 ENSP00000349364/1-563 ALSINEEMQR MLNQLREYDF EDDCDSLT-- ---------- ---------- ENSBTAP00000019606/1-562 ALSINEEMQR MLNQLREYDF EDDCDSLT-- ---------- ---------- ENSTTRP00000015256/1-566 ALSINEEMQR MLNQLREYDF EDDCDSLT-- ---------- ---------- BACU003083/1-402 ALSINEEMQR MLNQLREYDF EDDCDSLTWE ETEETLLLWE DFSVSRREYD bmy_11499T0/1-562 ALSINEEMQR MLNQLREYDF EDDCDSLT-- ---------- ---------- 451 500 ENSP00000349364/1-563 ---------W EETEETLLLW EDFSGYAMAA AEAQGEQQED SLEKVIKDTE ENSBTAP00000019606/1-562 ---------W EETEETLLLW EDFSGYALAA TEAPGE-PED SLEKVIKDTE ENSTTRP00000015256/1-566 ---------W EETEETLLLW EDFSGYALAA AEAPGEQPED SLEKVIKDTE BACU003083/1-402 VEDDCDSLTW EETEETLLLW EDFSGYALAA AEAPGEQPED SLEKVIKDTE bmy_11499T0/1-562 ---------W EETEETLLLW EDFSGYALAA AEAPGEQPED SLEKVIKDTE 501 550 ENSP00000349364/1-563 SLFKTREKEY QETIDQIELE LATAKNDMNR HLHEYMEMCS MKRGLDVQME ENSBTAP00000019606/1-562 SLFKTREKEY QETIDQIELE LATAKNDMNR HLHEYMEMCS MKRGLDVQME ENSTTRP00000015256/1-566 SLFKTREKEY QETIDQIELE LATAKNDMNR HLHEYMEMCS MKRGLDVQME BACU003083/1-402 SLFKTREKEY QETIDQIELE LATAKNDMNR HLHEYMEMCS MKRGLDVQME bmy_11499T0/1-562 SLFKTREKEY QETIDQIELE LATAKNDMNR HLHEYMEMCS MKRGLDVQME 551 600 ENSP00000349364/1-563 TCRRLITQSG DRKSPAFTAV PLSD--PPPP PSEAEDSDRD VSSDSSMR ENSBTAP00000019606/1-562 TCRRLITQSG DRKSPAFTAV PLSD-PPPPP PSEAEDSDRD VSSDGAMR ENSTTRP00000015256/1-566 TCRRLITQSG DRKSPAFTAA PLSDLPPPPP PSEAEDSDRD VSSDGAVR BACU003083/1-402 TCRRLITQSG DRKSPAFTAA PLSDLPPPPP PSEAEDSDRD VSSDSAMR bmy_11499T0/1-562 TCRRLITQSG DRKSPAFTAA PLSDLPPPPP PSEAEDSDRD VSSDGAVR