KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:38 2014 Check: 00 .. Name: bmy_03960T0/1-254 Len: 422 Check: 493 Weight: 1.00 Name: ENSTTRP00000004737/1-420 Len: 422 Check: 2678 Weight: 1.00 Name: ENSP00000280193/1-420 Len: 422 Check: 8430 Weight: 1.00 Name: BACU013316/1-350 Len: 422 Check: 5215 Weight: 1.00 Name: ENSBTAP00000019613/1-420 Len: 422 Check: 7429 Weight: 1.00 // 1 50 bmy_03960T0/1-254 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004737/1-420 MHLVGFFYLA CS-LTAALFQ SPRRAPAAAA AAAFESGLGF SDAEPDAGEA ENSP00000280193/1-420 MHLLGFFSVA CSLLAAALLP GPREAP--AA AAAFESGLDL SDAEPDAGEA BACU013316/1-350 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019613/1-420 MHLLGFCSVA CSLLAAALLP GPRRAP-AAA AAAFESGLGF SDTEPDAGEN 51 100 bmy_03960T0/1-254 ---------- ---------- --MSIHPLSY KAHHLNIVK- -------HLQ ENSTTRP00000004737/1-420 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000280193/1-420 TAYASKDLEE QLRSVSSVDE LMTVLYPEYW KMYKCQLRKG GWQHNREQAN BACU013316/1-350 ---------- ---------- -MTVLYPEYW KMYKCQLRKG GWQHSKEQAN ENSBTAP00000019613/1-420 KAYAGKEMEE QLRSVSSVDE LMTVLYPEYW KMYKCQLRKG GWQHSTEQAN 101 150 bmy_03960T0/1-254 MSTYDMNSVR VPLTVFTMEY ---------- -----KSILL DVQ------- ENSTTRP00000004737/1-420 XXXXXXXXXX XXXXXXXXXX XXXIDTEWRK TQCVPREVCV DVGKEFGAAT ENSP00000280193/1-420 LNSRTEETIK FAAAHYNTEI LKSIDNEWRK TQCMPREVCI DVGKEFGVAT BACU013316/1-350 ANTRTEGTLK FAAAHYNAEI LKSIDTEWRK TQCVPREVCV DVGKEFGAAT ENSBTAP00000019613/1-420 TNIRTGETLK FAAAHYNTEI LRSIDNEWRK TQCMPREVCI DVGKEFGAAT 151 200 bmy_03960T0/1-254 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004737/1-420 NTFFKPPCVS VYRCGGCCNS EGQRCTNTSA SYLSKALFEI TVPLSQGPKP ENSP00000280193/1-420 NTFFKPPCVS VYRCGGCCNS EGLQCMNTST SYLSKTLFEI TVPLSQGPKP BACU013316/1-350 NTFFKPPCVS VYRCGGCCNS EGQRCTNTSA SYLSKALFEI TVPLSQGPKP ENSBTAP00000019613/1-420 NTFFKPPCVS VYRCGGCCNS EGQQCMNTST SYLSKTLFEI TVPLSQGPKP 201 250 bmy_03960T0/1-254 ---------- ---LNDVKLL GRVGNI--KL MLAKHFRCQA ANKTCPTDYI ENSTTRP00000004737/1-420 VTISFANHTS CRCMSKLDVY RQVHSIIRRS LPATLPQCQA ANKTCPTDYI ENSP00000280193/1-420 VTISFANHTS CRCMSKLDVY RQVHSIIRRS LPATLPQCQA ANKTCPTNYM BACU013316/1-350 VTISFANHTS CRCMSKLDVY RQVHSIIRRS LPATLPQCQA ANKTCPTDYI ENSBTAP00000019613/1-420 VTISFANHTS CRCMSKLDVY RQVHSIIRRS LPAALPQCQA ANKTCPADYI 251 300 bmy_03960T0/1-254 WNNHICRCLA QQDFIFSSNV GDDSADGFHD ICGPNKELDE ETCQCVCRGG ENSTTRP00000004737/1-420 WNNHICRCLA QQDFIFSSNA GDDSADGFHD ICGPNKELDE ETCQCVCRGG ENSP00000280193/1-420 WNNHICRCLA QEDFMFSSDA GDDSTDGFHD ICGPNKELDE ETCQCVCRAG BACU013316/1-350 WNNHICRCLA QQDFIFSSNV GDDSADGFHD ICGPNKELDE ETCQCVCRGG ENSBTAP00000019613/1-420 WNNHVCRCLA QHDFIFSPSA GDDSADGFHD ICGPNKELDE ETCQCVCKGG 301 350 bmy_03960T0/1-254 LRPSSCGPHK ELDRNSCQCV CKNKLFPSSC AANREFDEDT CQCVCKRTCP ENSTTRP00000004737/1-420 LWPSSCGPHK ELDRNSCQCV CKNKLFPNSC AANREFDENT CQCVCKRTCP ENSP00000280193/1-420 LRPASCGPHK ELDRNSCQCV CKNKLFPSQC GANREFDENT CQCVCKRTCP BACU013316/1-350 LWPSSCGPHK ELDRNSCQCV CKNKLFPSSC AANREFDENT CQCVCKRTCP ENSBTAP00000019613/1-420 LQASSCGPHK ELDRDSCQCV CKNKLFPSSC GANREFDENT CQCICKKTCP 351 400 bmy_03960T0/1-254 RNQPLNPGKC ACECTETPQK CFLKGKKFQH QTCSCYRRPC TNRVKHCEHG ENSTTRP00000004737/1-420 RNQPLNPGKC ACECTETPQK CFLKGKKFQH QTCSCYRRPC TNRVKHCEQG ENSP00000280193/1-420 RNQPLNPGKC ACECTESPQK CLLKGKKFHH QTCSCYRRPC TNRQKACEPG BACU013316/1-350 RNQPLNPGKC ACECTETPQK CFLKGKKFQH QTCSCYRRPC TNRVKHCEQG ENSBTAP00000019613/1-420 RNQPLNPGKC ACECTENPQK CFLKGKKFQH QTCSCYRRPC TNRVKHCEQG 401 450 bmy_03960T0/1-254 LAFSEEVCRC VPSYWKRPHM N- ENSTTRP00000004737/1-420 LSFSEEVCRC VPSYWKRPHM N- ENSP00000280193/1-420 FSYSEEVCRC VPSYWKRPQM MS BACU013316/1-350 LSFSEEVCRC VPSYWKRPHM N- ENSBTAP00000019613/1-420 LSFSEEVCRC VPSYWKRPHV N-