KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:39 2014 Check: 00 .. Name: ENSBTAP00000019617/1-648 Len: 686 Check: 2592 Weight: 1.00 Name: ENSP00000292616/1-647 Len: 686 Check: 284 Weight: 1.00 Name: ENSTTRP00000014076/1-647 Len: 686 Check: 4377 Weight: 1.00 Name: bmy_17486T0/1-685 Len: 686 Check: 859 Weight: 1.00 Name: BACU012045/1-651 Len: 686 Check: 3226 Weight: 1.00 // 1 50 ENSBTAP00000019617/1-648 ---------- ---------- ---------- ----MAPLST RLLIQRGRPK ENSP00000292616/1-647 ---------- ---------- ---------- ----MGPLSA RLLMQRGRPK ENSTTRP00000014076/1-647 ---------- ---------- ---------- ----MGPLSA RLLIQRGRPK bmy_17486T0/1-685 TDSRGATSWN RTTAGASTGF PCRRSGPRGP RLLAMGPLSA RLLIQRGRPK BACU012045/1-651 ---------- ---------- ---------- ----MGPLSA RLLIQRGRPK 51 100 ENSBTAP00000019617/1-648 SNRLGKIRSL DLSGLNLLSE DLDHTLLGRL KQLQELDLSD NQLETLPADL ENSP00000292616/1-647 SDRLGKIRSL DLSGLELLSE HLDPKLLCRL TQLQELDLSN NHLETLPDNL ENSTTRP00000014076/1-647 CDRLGKIRSL DLSGMNLLSE HLDPKLLSRL KQLQELDLSN NQLETLPANL bmy_17486T0/1-685 SGRLGKIRSL DLSGLDLLSE HLDPKLLSRL KQLQELDLSN NQLETLPANL BACU012045/1-651 TDRLGKIRSL DLSGLDLLSE HLDPKLLSRL KQLQELDLSN NQLETLPANL 101 150 ENSBTAP00000019617/1-648 GLPHLHVLHC ANNQLSDVTH LCQFPQLEEL SLEGNPFLTV SDSLKVTFLL ENSP00000292616/1-647 GLSHLRVLRC ANNQLGDVTA LCQFPKLEEL SLEGNPFLTV NDNLKVSFLL ENSTTRP00000014076/1-647 GLSHLRILRC ANNQLGDVTV LCQFPQLEEL SLEGNPFLTV SDNLKVSFLL bmy_17486T0/1-685 GLSHLRILRC ANNQLGDVTA LCQFPQLEEL SLEGNPFLTV SDNLKVSFLL BACU012045/1-651 GLSHLRILRC ANNQLGDVTV LCQFPQLEEL SLEGNPFLTV SDNLKVSFLL 151 200 ENSBTAP00000019617/1-648 PELRKFNGKD ASTTRSKAES LNRELTTRVA THWKKFMAAL SPEEQAQ-AQ ENSP00000292616/1-647 PTLRKVNGKD ASSTYSQVEN LNRELTSRVT AHWEKFMATL GPEEEAEKAQ ENSTTRP00000014076/1-647 PKLRKVNGKD ASSTCSQVEN LNRELTSRVT AHWEKFMAAL SPEEEAEKAQ bmy_17486T0/1-685 PKLRKVNGKD ASSTCSQVEN LNRELTSRVT AHWEKFVAAL SPEEEAEKAQ BACU012045/1-651 PKLRKVNGKD ASSTCTQVEN LNRELTSRVT AHWEKFVATL SPEEEAEKAQ 201 250 ENSBTAP00000019617/1-648 ADFVKSAVRN VRYGPMSLSE FTQWRVRMIS EELVASGGTH ARETDMPEGS ENSP00000292616/1-647 ADFVKSAVRD VRYGPESLSE FTQWRVRMIS EELVAASRTQ VQKANSPEKP ENSTTRP00000014076/1-647 ADFVRSAVRD VRYGPESLSD FTQWRVRMIS EELVASGGTQ VHEANISERP bmy_17486T0/1-685 ADFVRSAVRD VRYGPESLSD FTQWRVRMIS EELVASGGTQ VHEANISERP BACU012045/1-651 ADFVRSAVRD VRYGPESLSD FTQWRVQMIS EELVASGGTQ VHEANISERP 251 300 ENSBTAP00000019617/1-648 HKATATQQPR ARPVALRRPG DTLLSLSPQK RMCTSLLAPV EGSLV-GSDS ENSP00000292616/1-647 PEAGAAHKPR ARLAALKRPD DVPLSLSPSK RACASPSAQV EGSPVAGSDG ENSTTRP00000014076/1-647 PKATTIQEPR AGPVASKRPG DGPVNLSPNK RVCTSPLAQV EGSPV-GSAG bmy_17486T0/1-685 PKATATQEPR ARPVASKRPG DVPVNLSPNK RVCTSPLAQV EGSPV-GSAG BACU012045/1-651 PKATATQEPR ARPVASKRPG DVPVNLSPNK RVCTSPLAQV EGSPV-GSAD 301 350 ENSBTAP00000019617/1-648 SQPVLQLEPL HFLQCHSKNN SPSDLKTQLW ACAFEPAWDE GQAGAASQTV ENSP00000292616/1-647 SQPAVKLEPL HFLQCHSKNN SPQDLETQLW ACAFEPAWEE ---GATSQTV ENSTTRP00000014076/1-647 SQTALQLEPL HFLQCHSKNN SPRDLETQLW ACAFEPAWDE ---GATSQTV bmy_17486T0/1-685 SQTALQLEPL HFLQCHSKNN SPRDLETQLW ACAFEPAWDE GQAGATSQTV BACU012045/1-651 SQTALQLEPL HFLQCHSKNN SPRDLETQLW ACAFEPAWDE GQAGATSQTV 351 400 ENSBTAP00000019617/1-648 ATCGGEAVCV IDCQTGIVLH KYKVPGEEFF SVAWTALTVV TQTGHKKRWN ENSP00000292616/1-647 ATCGGEAVCV IDCQTGIVLH KYKAPGEEFF SVAWTALMVV TQAGHKKRWS ENSTTRP00000014076/1-647 ATCGGEAVCV IDCQTGIVLH KYKAPSEEFF SVAWTALTVV TQAGHKKRWS bmy_17486T0/1-685 ATCGGEAVCV IDCQTGIVLH KYKAPSEEFF SVAWTALTVV TQAGHKKRWS BACU012045/1-651 ATCGGEAVCV IDCQTGIVLH KYKAPSEEFF SVAWTALTVV TQAGHKKRWS 401 450 ENSBTAP00000019617/1-648 VLAAAGLRGL VRLLHVQAGF CCGLIRGHRK AIATLCFSPT HETHLFTASY ENSP00000292616/1-647 VLAAAGLRGL VRLLHVRAGF CCGVIRAHKK AIATLCFSPA HETHLFTASY ENSTTRP00000014076/1-647 VLAAAGLRGL VRLLHVRAGF CCGLIRAHKK AIATLCFSPT HETHLFTASY bmy_17486T0/1-685 VLAAAGLRGL VRLLHVRAGF CCGLIRAHKK AIATLCFSPT HETHLFTASY BACU012045/1-651 VLAAAGLRGL VRLLHVRAGF CCGLIRAHKK AIATLCFSPT HETHLFTASY 451 500 ENSBTAP00000019617/1-648 DKRIILWDIG TPNQDYEFQA SHLLTLDTTS TPLRLCPVPP CPDAYLLAGC ENSP00000292616/1-647 DKRIILWDIG VPNQDYEFQA SQLLTLDTTS IPLRLCPVAS CPDARLLAGC ENSTTRP00000014076/1-647 DKRIILWDIG VPNHDYEFQA SQLLTLDTTS IALCLCPVAS CPDAYLLAGC bmy_17486T0/1-685 DKRIILWDIG VPNHDYEFQA SQLLTLDTTS IALRLCPVAS CPDAYLLAGC BACU012045/1-651 DKRIILWDIG VPNHDYEFQA SQLLTLDTAS IALRLCPVAS CPDAYLLAGC 501 550 ENSBTAP00000019617/1-648 EGGCCCWDVR LDQPQKKRVC EVEFVFSEGS KVSGQRVDGL AFVNEDVVAS ENSP00000292616/1-647 EGGCCCWDVR LDQPQKRRVC EVEFVFSEGS EASGRRVDGL AFVNEDIVAS ENSTTRP00000014076/1-647 EGGCRCWDVR LDQPQKRRVC EVEFVFSEGS EATGRRVDGL AFVNEDVVTS bmy_17486T0/1-685 EGGCCCWDVR LDQPQKRRVC EVEFVFPEGS EATGRRVDGL AFVNEDVVAS BACU012045/1-651 EGGCCCWDVR LDQPQKRRVC EVEFVFPEGS EATGRRVDGL AFVNEDVVAS 551 600 ENSBTAP00000019617/1-648 KGSSLGTICL WSWSQTWQGR GSQPTVAVVV LAWLQWSPTI LAYFSLSTCP ENSP00000292616/1-647 KGSGLGTICL WSWRQTWGGR GSQSTVAVVV LARLQWSSTE LAYFSLSACP ENSTTRP00000014076/1-647 KGSSLGTICL WSWSQTWQGR GSQSTVAVVV LARLQWSPTE LAYFSLSTCP bmy_17486T0/1-685 KGSSLGTICL WSWSQTWQGR GSRSTVAVVV LARLQWSPTE LAYFSLSTCP BACU012045/1-651 KGSSLGTICL WSWSQTWQGR GSRSTVAVVV LARLQWSPTE LAYFSLSTCP 601 650 ENSBTAP00000019617/1-648 DKGLVLCGDE QGSVWIYDVR PLLAQRSPPQ TAPQAPTQIL KWPQPQAMGQ ENSP00000292616/1-647 DKGIVLCGDE EGNVWLYDVS NILKQPPLLP AALQAPTQIL KWPQPWALGQ ENSTTRP00000014076/1-647 GEGMVLCGDE EGNVWIYDVR PLMAQRPPPP ATPQAPTQIL KWPQPRALGQ bmy_17486T0/1-685 DEGTVLCGDE EGNVWIYDVR PLVAQRAPPP AAPQAPTQIL KWPQPRALGQ BACU012045/1-651 DEGTVLCGDE EGNVWIYDVR PLVAQRPPPP AAPQAPTQIL KWPQPRALGQ 651 700 ENSBTAP00000019617/1-648 TVTKTMVNTV VANPAFTYLT ALTDSNIVAI WRRG-- ENSP00000292616/1-647 VVTKTMVNTV VANASFTYLT ALTDSNIVAI WGRM-- ENSTTRP00000014076/1-647 TVSRTMVNTV VADPTFTYLT ALTDSNIVAI WRRNQ- bmy_17486T0/1-685 TVSRTMVNMV VADPTFTYLT ALTDSNIVAI WRRNRP BACU012045/1-651 TVSRTMVNMV VADPTFTYLT ALTDSNIVAI WRRNRP