KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:08:39 2014 Check: 00 .. Name: ENSP00000351157/1-360 Len: 398 Check: 8846 Weight: 1.00 Name: ENSBTAP00000019620/1-360 Len: 398 Check: 8742 Weight: 1.00 Name: bmy_03814T0/1-397 Len: 398 Check: 1160 Weight: 1.00 Name: ENSTTRP00000015996/1-355 Len: 398 Check: 4609 Weight: 1.00 // 1 50 ENSP00000351157/1-360 MVPAAGRR-- ---------P PRV-----MR LL-------- ---------- ENSBTAP00000019620/1-360 RPGCTGRC-- ---------P PRT-----MR LI-------- ---------- bmy_03814T0/1-397 -MAARGRARA PGLSSPSLPP ARSATRVAVR RLPFGLGGGA AARRAPCGSL ENSTTRP00000015996/1-355 -VAC------ ---------P PRT-----MR LL-------- ---------- 51 100 ENSP00000351157/1-360 --GWWQVLLW VLGLPVRG-- VEVAEESGRL WSEEQPAHPL QVGAVYLGEE ENSBTAP00000019620/1-360 --GWWQVLLW VLGSPARA-- EEIAEKRSHL WSEEQPAYPF QVGAVYMNEE bmy_03814T0/1-397 AGGRYCCGCW GLPLAARRWH VLVAEKRGHL WSEEQPAYPF QVGAGYTSEE ENSTTRP00000015996/1-355 --GWWQVLLW VLGPPARG-- QEVAEKRGHL WSEEQPAYPF QVGAGYMSEE 101 150 ENSP00000351157/1-360 ELLHDPMGQD RAAEEANAVL GLDTQGDHMV MLSVIPGEAE DKVSSEPSGV ENSBTAP00000019620/1-360 VPSPDPVGQD PSAEETEAVL GLDADGNHMV MLSVIPGGAE DKLSPESSSG bmy_03814T0/1-397 VPSRDPVGQD LSAEEAEAVL GLDADGEHMV MLSVIPGEAE DKLSPEPSGG ENSTTRP00000015996/1-355 VPSRDPVGQD LAAEEAEAVL GLDADGEHMV MLSVIPGEAE DKLSPEPSSG 151 200 ENSP00000351157/1-360 TCGAGGAEDS RCNVRESLFS LDGAGAHFPD REEEYYTEPE VAESDAAPTE ENSBTAP00000019620/1-360 TCGAGGEEGS RCNLRESLFS LDRAGARFSE REEEYYTEPD VAESDPTPTE bmy_03814T0/1-397 TCRAGGEEDS RCNPRESLFS LDSAGASFPE REEEYYAEPE VVESDPPPTE ENSTTRP00000015996/1-355 TCRAGGEEDS RCNPRESLFS LDSAGASFPE REEEYYAEPE VVESDPPPTE 201 250 ENSP00000351157/1-360 DSNNTESLKS PKVNCEERNI TGLENFTLKI LNMSQDLMDF LNPNGSDCTL ENSBTAP00000019620/1-360 DANTTESLKS PKVNCEERNV TGLENFTLKI LNMSQDLMDF LNPNGSDCTL bmy_03814T0/1-397 DANTTESLKS PKVNCEERNV TGLENFTLKI LNMSQDLMDF LNPNGSDCTL ENSTTRP00000015996/1-355 DANTTESLKS PKVNCEERNV TGLENFTLKI LNMSQDLMDF LNPNGSDCTL 251 300 ENSP00000351157/1-360 VLFYTPWCRF SASLAPHFNS LPRAFPALHF LALDASQHSS LSTRFGTVAV ENSBTAP00000019620/1-360 VLFYTPWCRF SASLAPHFNS LPRAFPALHF LALDASQHSS LSTRFGTVAV bmy_03814T0/1-397 VLFYTPWCRF SASLAPHFNS LPRAFPALHF LALDASQHSS LSTRFGTVAV ENSTTRP00000015996/1-355 VLFYTPWCRF SASLAPHFNS LPRAFPALHF LALDASQHSS LSTRFGTVAV 301 350 ENSP00000351157/1-360 PNILLFQGAK PMARFNHTDR TLETLKIFIF NQTGIEAKKN VVVTQADQIG ENSBTAP00000019620/1-360 PNILLFQGAK PMARFNHTDR TLETLKIFIF NQTGIEAKKN VVVTQADQIG bmy_03814T0/1-397 PNILLFQGAK PMARFNHTDR TLETLKIFIF NQTGIEAKKN VVVTQADQIG ENSTTRP00000015996/1-355 PNILLFQGAK PMARFNHTDR TLETLKIFIF NQTGIEAKKN VVVTQADQIG 351 400 ENSP00000351157/1-360 PLPSTLIKSV DWLLVFSLFF LISFIMYATI RTESIRWLIP GQEQEHVE ENSBTAP00000019620/1-360 PLPSTLIKSV DWLLVFSLFF LISFIMYATI RTESIRWLIP GQEQEHAE bmy_03814T0/1-397 PLPSTLIKNV DWLLVFSLFF LISFIMYATV RTESIRWLIP GQEQEHAE ENSTTRP00000015996/1-355 PLPSTLIKNV DWLLVFSLFF LISFIMYATV RTESIRWLIP GQEQEHAE