KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:08:40 2014 Check: 00 ..
Name: ENSP00000282611/1-398 Len: 745 Check: 1618 Weight: 1.00
Name: ENSBTAP00000019622/1-400 Len: 745 Check: 5217 Weight: 1.00
Name: ENSTTRP00000015999/1-400 Len: 745 Check: 7417 Weight: 1.00
Name: bmy_03817T0/1-212 Len: 745 Check: 6096 Weight: 1.00
Name: BACU004081/1-745 Len: 745 Check: 1487 Weight: 1.00
//
1 50
ENSP00000282611/1-398 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000019622/1-400 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000015999/1-400 ---------- ---------- ---------- ---------- ----------
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 MRLLGWWQVL LWVLGPPARG QEVGSPATEA IMEKNLWLVE SLLRTTGRVG
51 100
ENSP00000282611/1-398 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000019622/1-400 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000015999/1-400 ---------- ---------- ---------- ---------- ----------
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 AGYTSEEVPS RDPVGQDLSA EEAEAVLGLD TDGEHMVMLS VIPGEAEDKL
101 150
ENSP00000282611/1-398 ---------- ---------- ---------- ------MSQH -RHQRHSRVI
ENSBTAP00000019622/1-400 ---------- ---------- ---------- ------MSQH FYHQDHARIL
ENSTTRP00000015999/1-400 ---------- ---------- ---------- ------MSQH FYHQNHTRVR
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 SPEPSGGTCR AGGEEDSRCN PRESLFSLDS AGASFPEREE EYYAEPEVVE
151 200
ENSP00000282611/1-398 SSSP----VD TTSVGFCPTF KKFKRNDDEC RAFVKRVI-- ----------
ENSBTAP00000019622/1-400 SNSL----LE NASHMFYEKL WKFQRKDTQF QAFVKKVI-- ----------
ENSTTRP00000015999/1-400 PSSL----FE DVSPLFYETL WKSQRKDTQC QAFVKRVI-- ----------
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 SDPPPTEDAN TTESLKSPKV NCEERNVTGL ENFTLKILNM SQDLMDFLNP
201 250
ENSP00000282611/1-398 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000019622/1-400 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000015999/1-400 ---------- ---------- ---------- ---------- ----------
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 NGSDCTLVLF YTPWCRFSAS LAPHFNSLPR AFPALHFLAL DASQHSSLST
251 300
ENSP00000282611/1-398 ---------- --------MS RFFKI----- ---IMISTVT SNAFFMAL--
ENSBTAP00000019622/1-400 ---------- --------MS HLFKI----- ---IMISTIS MNAFFMVL--
ENSTTRP00000015999/1-400 ---------- --------MS RLFKI----- ---IMISTVS TNAFFMVL--
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 RFGTVAVPNI LLFQGAKPMA RFNHTDRTLE TLKIFIFNQT ADAHWLTAEE
301 350
ENSP00000282611/1-398 ---------- --WTSYDIRY RLFRLLEF-- ---------- ----------
ENSBTAP00000019622/1-400 ---------- --WTDYKTRY NLFRLFEV-- ---------- ----------
ENSTTRP00000015999/1-400 ---------- --WTDYKTRY NLFRLFEX-- ---------- ----------
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 RNRVILDLKA AGWSELSERD AIYKEFSFKN FNQPSIAVSS TCDFVSEGVS
351 400
ENSP00000282611/1-398 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000019622/1-400 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000015999/1-400 ---------- ---------- ---------- ---------- ----------
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 GHSEGDRNHE IAGNEATLAT SRAGGTVSHH FRLHLMQAFG FMSRVALQAE
401 450
ENSP00000282611/1-398 ---------- ---------- ---------- -SEIFFVSIC TSELSMKVYV
ENSBTAP00000019622/1-400 ---------- ---------- ---------- -SELIFVSIY TSEFCMKLYV
ENSTTRP00000015999/1-400 ---------- ---------- ---------- -XXXXXXXXX XXXXXXXXXX
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 KMNHHPEWFN VYNKTGRKKK TSVLSKASSK VSELIFVSIY SSEFCMKLYV
451 500
ENSP00000282611/1-398 DPINYWKNGY NLLDVIIIIV MFLPYALRQL MGKQFTYLYI ADGMQSLRIL
ENSBTAP00000019622/1-400 DPISYWKDGY NLLDVVIIII IFIPYSLRKI KGKHYPYLNI ADGVQSLRIL
ENSTTRP00000015999/1-400 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
bmy_03817T0/1-212 ---------- ---------- ---------- ---------- ----------
BACU004081/1-745 DPINYWKDGY NLLDVIIIII IFIPYSLRKI KGKHYPYLNI ADGVQSLRIL
501 550
ENSP00000282611/1-398 KLIGYSQGIR TLITAVGQTV YTVASVLLLL FLLMYIFAIL GFCLFGSPDN
ENSBTAP00000019622/1-400 KLITYSRGIR TLITAMGQTA YTVASVLILF FVLMYIFAIL GFCLFGLPEG
ENSTTRP00000015999/1-400 XXXXXXXXXX TLISAMGQTA CTVASVLVLL FVLMYVFAVL GFCLFGVPES
bmy_03817T0/1-212 ---------- ---------- ---------- ---MYIFAVL GFCLFGVPER
BACU004081/1-745 KLITYSRGIR TLITAVGQTA YTVASVLILL FVLMYIFAVL GFCLFGVPER
551 600
ENSP00000282611/1-398 GDHDNWGNLA AAFFTLFSLA TVDGWTDLQK QLDNREFALS RAFTIIFILL
ENSBTAP00000019622/1-400 GDMNNWGNLA LAFFTLFSLA TVDGWTDLQE QLDARNLILS RSFTIIFILL
ENSTTRP00000015999/1-400 ADLKNWGNLA LAFFTLFSLA TVDGWTDLQQ QLDARNFTLS RSFTIIFILL
bmy_03817T0/1-212 ADLNNWGNLA LAFFTLFSLA TVDGWTDLQQ QLDARNFILS RSFTIIFILL
BACU004081/1-745 ADLNNWGNLA LAFFTLFSLA TVDGWTDLQQ QLDARNFILS RSFTIIFILL
601 650
ENSP00000282611/1-398 ASFIFLNMFV GVMIMHTEDS IRKFERELML EQQEMLMGEK QVILQRQQEE
ENSBTAP00000019622/1-400 ASFVFLSMFV GVMIIHTEDS IKKFERELML ERRMNLMEEK QVILKRQQEE
ENSTTRP00000015999/1-400 ASFVFLSMFV GVMIIHTEDS VKKFERELML ERHMTLMEEK HVILKWQQEE
bmy_03817T0/1-212 ASFVFLSMFV GVMIIHTEDS VKKFERELML ERHMTLMEEK HVILKRQQEE
BACU004081/1-745 ASFVFLSMFV GVMIIHTEDS VKKFERELML ERHMTLMEEK HVILKRQQEE
651 700
ENSP00000282611/1-398 ISRLMHIQKN ADCTSFSELV ENFKKTLSHT DPMVLDDFGT SLPFIDIYFS
ENSBTAP00000019622/1-400 VSKLMQTQKD LDHKSFTELV EKFKKTLRHT DPMVLDDFGT SLPFIDIYLS
ENSTTRP00000015999/1-400 VSKLMQTQKN VDHKSSTELV EKFKKTLRHT DPMVLDDFGT SLPFIDVYLS
bmy_03817T0/1-212 VSKLMQTQKN VDHKSFTELV EKFKKTLRHT DPMVLDDFGT SLPFIDVYLS
BACU004081/1-745 VSKLMQTQKN VDHKSFTELV EKFKKTLRHT DPMVLDDFGT SLPFIDVYLS
701 750
ENSP00000282611/1-398 TLDYQDTTVH KLQELYYEIV HVLSLMLEDL PQEK-PQSLE KVDEK
ENSBTAP00000019622/1-400 TLDNQDATIY KLQELYYEIV HVLSLMLEDL PQKKQSKSSE KVDEK
ENSTTRP00000015999/1-400 TLDNQDATIY KLQELYYEIV HVLSLMLEDL PQRKQSQSLE KVEEK
bmy_03817T0/1-212 TLDNQDATIY KLQELYYEIM HVLSLMLEDL PQKKQSQSLE KVEEK
BACU004081/1-745 TLDNQDATIY KLQELYYEIV HVLSLMLEDL PQKKQSQSLE KVEEK