KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:41 2014 Check: 00 .. Name: bmy_19662T0/1-396 Len: 853 Check: 7736 Weight: 1.00 Name: ENSP00000261486/1-686 Len: 853 Check: 9373 Weight: 1.00 Name: ENSBTAP00000019627/1-651 Len: 853 Check: 7697 Weight: 1.00 Name: BACU014968/1-578 Len: 853 Check: 6500 Weight: 1.00 Name: ENSTTRP00000006451/1-686 Len: 853 Check: 8147 Weight: 1.00 // 1 50 bmy_19662T0/1-396 -------MDE Y-------KP SNWDPSTEIF YSPKSTKGSV VLEHVFRHIN ENSP00000261486/1-686 MGCFCAVPEE FYCEVLLLDE SKLTLTTQQQ GIKKSTKGSV VLDHVFHHVN ENSBTAP00000019627/1-651 MGCFCAVPEE FYCEVLLLNE SKLTLTTQQQ GIK------- ---------- BACU014968/1-578 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006451/1-686 MGCFCAVPEE FYCEVLLLNE SKLTLTTQQQ GIKKSTKGSV VLEHVFRHIN 51 100 bmy_19662T0/1-396 LVEIDYFGLR YCDRNHQTFL SLKTAIVRAL SLGLEPPFCS ALACVIRFVL ENSP00000261486/1-686 LVEIDYFGLR YCDRSHQT-- ---------- ---------- ---------- ENSBTAP00000019627/1-651 ---------- ---------- ---------- ---------- ---------- BACU014968/1-578 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006451/1-686 LVEIDYFGLR YCDRNHQT-- ---------- ---------- ---------- 101 150 bmy_19662T0/1-396 NPDWFVRVVE QFLLRKEVMV LFWSRFPFRM VDHNRHKCVF HGLKGETLGH ENSP00000261486/1-686 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019627/1-651 ---------- ---------- ---------- ---------- ---------- BACU014968/1-578 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006451/1-686 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_19662T0/1-396 DKGNIIKYHC GILKFSKGCI NAIIKIDRTE EIKCNACAAS AGLIFGVSNV ENSP00000261486/1-686 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019627/1-651 ---------- ---------- ---------- ---------- ---------- BACU014968/1-578 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006451/1-686 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_19662T0/1-396 QNMRRWKLVS SALGISSIWQ EHQVILFHKA AENSYYWLDP AKTLAEHKEL ENSP00000261486/1-686 ---------- ---------- ---------- -----YWLDP AKTLAEHKEL ENSBTAP00000019627/1-651 ---------- ---------- ---------- -----YWLDP AKTLSEHKEL BACU014968/1-578 ---------- ---------- ---------- ---------- ---------L ENSTTRP00000006451/1-686 ---------- ---------- ---------- -----YWLDP AKTLAEHKEL 251 300 bmy_19662T0/1-396 INTGPPYTLY FGIKFYAEDP CKLKEEITRY QFFLQVKQDV LQGRLPCPVN ENSP00000261486/1-686 INTGPPYTLY FGIKFYAEDP CKLKEEITRY QFFLQVKQDV LQGRLPCPVN ENSBTAP00000019627/1-651 INTGPPYTLY FGIKFYAEDP CKLKEEITRY QFFLQVKQDV LQGRLPCPIN BACU014968/1-578 FLAGPPYTLY FGIKFYAEDP CKLKEEITRY QFFLQVKQDV LQGRLPCPIN ENSTTRP00000006451/1-686 INTGPPYTLY FGIKFYAEDP CKLKEEITRY QFFLQVKQDV LQGRLPCPVN 301 350 bmy_19662T0/1-396 TAAQLGAYAI QSELGDYDPY KHTAG----- ---------- ---------- ENSP00000261486/1-686 TAAQLGAYAI QSELGDYDPY KHTAGYVSEY RFVPDQKEEL EEAIERIHKT ENSBTAP00000019627/1-651 TAAQLGAYAI QAELGDYDPY KHTAGYVSEY RFVPDQKEEL EEAIERIHKT BACU014968/1-578 TAAQLGAYAI QSELGDYDPY KHTAGYVSEY RFVPDQKEEL EEAIERIHKT ENSTTRP00000006451/1-686 TAAQLGAYAI QSELGDYDPY KHTAGYVSEY RFVPDQKEEL EEAIERIHKT 351 400 bmy_19662T0/1-396 --GQAPSEAE LNYLRTAKSL EMYGVALHPV YGENKSEYFL GLTPVGVVVY ENSP00000261486/1-686 LMGQIPSEAE LNYLRTAKSL EMYGVDLHPV YGENKSEYFL GLTPVGVVVY ENSBTAP00000019627/1-651 LTGQAPSEAE LNYLRTAKSL EMYGVDLHPV YGENKSEYFL GLTPVGVVVY BACU014968/1-578 LMGQAPSEAE LNYLRTAKSL EMYGVDLHPV YGENKSEYFL GLTPVGVVVY ENSTTRP00000006451/1-686 LMGQAPSEAE LNYLRTAKSL EMYGVDLHPV YGENKSEYFL GLTPVGVVVY 401 450 bmy_19662T0/1-396 KNKKQVGKYF WPRITKVHFK ETQFELRVLG KD-------- ---------- ENSP00000261486/1-686 KNKKQVGKYF WPRITKVHFK ETQFELRVLG KDCNETSFFF EARSKTACKH ENSBTAP00000019627/1-651 KNKKQVGKYF WPRITKVHFK ETQFELRVLG KDCSETSFFF EARSKTACKH BACU014968/1-578 KNKKQVGKYF WPRITKVHFK ETQFELRVLG KDCNETSFFF EARSKTACKH ENSTTRP00000006451/1-686 KNKKQVGKYF WPRITKVHFK ETQFELRVLG KDCNETSFFF EARSKTACKH 451 500 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 LWKCSVEHHT FFRMPENESN SLSRKLSKFG SIRYKHRYSG RTALQMSRDL ENSBTAP00000019627/1-651 LWKCSVEYHT FFRMPENESN SLSRKLSKFG SMSYKHRYSG RTALQMSRDL BACU014968/1-578 LWKCSVEHHT FF-------- ---------- --------SG RTALQMSRDL ENSTTRP00000006451/1-686 LWKCSVEHHT FFRMPENESN SLSRKLSKFG SLSYKHRYSG RTALQMSRDL 501 550 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 SIQLPRPDQN VTRSRSKTYP KRIAQTQPAE SNSISRITAN MENGENEGTI ENSBTAP00000019627/1-651 SIQLPRPDQN VSRSRSKTYP KRIAQTQPAG SNSINRVTAN MENGENEGTT BACU014968/1-578 SIQLPRPDQN VARSRSKTYP KRIAPTQPAG SDSMNRVTAN MENGENEGTT ENSTTRP00000006451/1-686 SIQLPRPDQN VARSRSKTYP KRIAPTQPAG SDSINRVTAN MENGENEGTT 551 600 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 KIIAPSPVKS FKKAKNENSP DTQRSKSHAP WEENGPQSGL YNSPSDRTKS ENSBTAP00000019627/1-651 KIIAPSPIKS FKKAKNENSP DTQRSKSHAP WEENGPQSGL YNSPNDRTKS BACU014968/1-578 KIIAPSPIKS FKKAKNENSP VTQRSKSHAP WEENGPQSGL YNSPNDRTKS ENSTTRP00000006451/1-686 KIIAPSPIKS FKKAKNENSP VTQRSKSHAP WEENGPQSGL YNSPNDRTKS 601 650 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 PKFPYTRRRN PSCGSDNDSV QPVRRRKAHN SGEDSDLKQR RRSRSRCNTS ENSBTAP00000019627/1-651 PKFPYTRRRN PSCGSDNDSV QPTRRRKAHN SGEDSDLKQR RRSRSRCNTS BACU014968/1-578 PKFPYARRRN PSCGSDHDSV QPTRRRKAHN SGEDSDLKQR RRSRSRCNTS ENSTTRP00000006451/1-686 PKFPYARRRN PSCGSDHDSV QPTRRRKAHN SGEDSDLKQR RRSRSRCNTS 651 700 bmy_19662T0/1-396 --------NT TYR------- ---------- ---------- ---------- ENSP00000261486/1-686 SGSESENSNR EYRKKRNRIR QENDMVDSAP QWEAVLRRQK EKNQADPNNR ENSBTAP00000019627/1-651 SGSESENSNR EHRKKRNRIR QENDMVDSAP QWEAVLRRQK EKNQADPNNR BACU014968/1-578 SGSESENSNR EHRKKRNRIR QENDMVDSAP QWEAVLRRQK EKNQADPNNR ENSTTRP00000006451/1-686 SGSESENSNR EHRKKRNRIR QENDMVDSAP QWEAVLRRQK EKNQADPNNR 701 750 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 RSRHRSRSRS PDIQAKEELW KHIQKELVDP SGLSEEQLKE IPYTKIETQG ENSBTAP00000019627/1-651 RSRHRSRSRS PDIQAKEELW KHIQKELVDP SGLSEEQLKE IPYTKIETQG BACU014968/1-578 RSRHRSRSRS PDIQAKEELW KHIQKELVDP SGLSEEQLKE IPYTKIETQG ENSTTRP00000006451/1-686 RSRHRSRSRS PDIQAKEELW KHIXKELVDP SGLSEEQLKE IPYTKIETQG 751 800 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 DPIRIRHSHS PRSYRQYRRS QCSDGERSVL SEVNSKTDLV PPLPVTRSSD ENSBTAP00000019627/1-651 DPVRIRHSHS PRSHRQHRRS QCSDGERSVL SEVNSKTDLV PPLPVTRSSD BACU014968/1-578 DPVRIRHSHS PRSYRQYRRS QCSDGERSVL SEVNSKMDLV PPLPVTRSSD ENSTTRP00000006451/1-686 DPVRIRHSHS PRSYRQYRRS QCSDGERSVL SEVNSKTDLV PPLPVTRSSD 801 850 bmy_19662T0/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000261486/1-686 AQGSGDATVH QRRNGSKDSL MEEKPQTSTN NLAGKHTAKT IKTIQASRLK ENSBTAP00000019627/1-651 AQGSGGSTVH QRRNGSKDSL IEEKSQTATS NMAGKHTAKT IKTIQASRLK BACU014968/1-578 AQGSGGSTVH QRRNGSKDSL IEEKSQTSTS NLAGKHTAKT IKTTQASRLK ENSTTRP00000006451/1-686 AQGSGGSTVH QRRNGSKDSL IEEKSQTSTS NLAGKHTAKT IKTTQASRLK 851 900 bmy_19662T0/1-396 --- ENSP00000261486/1-686 TET ENSBTAP00000019627/1-651 IET BACU014968/1-578 IET ENSTTRP00000006451/1-686 IET