KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:43 2014 Check: 00 .. Name: ENSP00000286574/1-379 Len: 433 Check: 7962 Weight: 1.00 Name: ENSBTAP00000019636/1-381 Len: 433 Check: 8098 Weight: 1.00 Name: ENSTTRP00000010955/1-376 Len: 433 Check: 2619 Weight: 1.00 Name: bmy_06824T0/1-303 Len: 433 Check: 1092 Weight: 1.00 Name: BACU008192/1-379 Len: 433 Check: 1116 Weight: 1.00 // 1 50 ENSP00000286574/1-379 MARRSAFPAA ALWLWSILLC LLALRAEAGP PQEESLYLWI DAHQARVLIG ENSBTAP00000019636/1-381 MARKSAFPAG ALWLWSILPC LLVLRAEVGQ QPEESLYLWI DAHQARVLIG ENSTTRP00000010955/1-376 MARRGAFPAA ALRFWSILPC LLVLRAEVGQ PPEESLYLWI DAHQARVLIG bmy_06824T0/1-303 MARRSAFPAA ALRVWSILPC LLVLRAEVGQ PREESLYLWI DAHQARVLIG BACU008192/1-379 MARRSAFPAA ALRVWSILPC LLVLRAEVGQ PREESLYLWI DAHQARVLIG 51 100 ENSP00000286574/1-379 FEEDILIVSE GKMAPFTHDF RKAQQRMPAI PVNIHSMNFT WQAAGQAEYF ENSBTAP00000019636/1-381 LEEDILIVSE GKMAPFTHDF RRAQQRMPAI PVNIHSMNFT WQAAGQAEYF ENSTTRP00000010955/1-376 FEEDILIVSE GKMAPFTHDF RRAQQRMPAI PVNIHSMNFT WQAEGQAEYF bmy_06824T0/1-303 FEEDILIVSE GKMAPFTHDF RRAQQRMPAI PVNIHSMNFT WQAEGQAEYF BACU008192/1-379 FEEDILIVSE GKMAPFTHDF RRAQQRMPAI PVNIHSMNFT WQAEGQAEYF 101 150 ENSP00000286574/1-379 YEFLSLRSLD KGIMADPTVN VPLLGTVPHK AS-------- ---------- ENSBTAP00000019636/1-381 YEFLSLRSLD KGIMADPTVN VPLLGTVPHK AS-------- ---------- ENSTTRP00000010955/1-376 YEFLSLRSLD KGIMADPTVN VPLLGTVPHK AS-------- ---------- bmy_06824T0/1-303 YEFLSLRSLD KGIMADPTVN VPLLGTVPHK ASGYPFTNDK FTIKADNSIQ BACU008192/1-379 YEFLSLRSLD KGIMADPTVN VPLLGTVPHK AS-------- ---------- 151 200 ENSP00000286574/1-379 ---------- ---------- ---------- ----VVQVGF PCLGKQDGVA ENSBTAP00000019636/1-381 ---------- ---------- ---------- ----VVQVGF PCLGKQDGVA ENSTTRP00000010955/1-376 ---------- ---------- ---------- ----VVQVGF PCLGKQDGVA bmy_06824T0/1-303 LFPTRLPPVS SQSARLFGED TIQINCFSIP SFSLVVQVGF PCLGKQDGVA BACU008192/1-379 ---------- ---------- ---------- ----VVQVGF PCLGKQDGVA 201 250 ENSP00000286574/1-379 AFEVDVIVMN SEGNTILQTP QNAIFFKTCQ Q--AECPGGC RNGGFCNERR ENSBTAP00000019636/1-381 AFEVNVIVMN SEGNTILQTP QNAIFFKTCQ QGEAECPGGC RNGGFCNERR ENSTTRP00000010955/1-376 AFEVNVIVMN SEGNTILQTP QNAIFFKTCQ Q--AECPGGC RNGGFCNERR bmy_06824T0/1-303 AFEVNVIVMN SEGNTILQTP QNAIFFKTCQ Q--AECPGGC RNGGFCNERR BACU008192/1-379 AFEVNVIVMN SEGNTILQTP QNAIFFKTCQ Q--AECPGGC RNGGFCNERR 251 300 ENSP00000286574/1-379 ICECPDGFHG PHCEKALCTP RCMNGGLCVT PGFCICPPGF YGVNCDKANC ENSBTAP00000019636/1-381 VCECPDGFYG PHCEKVLCSP RCMNGGLCVT PGFCICPPGF YGVNCDKANC ENSTTRP00000010955/1-376 VCQCPDGFYG PHCEKALCTP QCMNGGLCVT PGFCICPPGF YGVNCDKANC bmy_06824T0/1-303 VCQCPDGFYG PHCEKG---- ---------- ---------- ---------- BACU008192/1-379 VCQCPDGFYG PHCEKALCTP RCMNGGLCVT PGFCICPPGF YGVNCDKANC 301 350 ENSP00000286574/1-379 STTCFNGGTC FYPGKCICPP GLEGEQCEIS KCPQPCRNGG KCIGKSKCKC ENSBTAP00000019636/1-381 SATCFNGGTC FYPGKCICPP GLEGEQCETS KCPQPCRNGG KCIGKNKCKC ENSTTRP00000010955/1-376 SATCFNGGTC FYPGKCICPP GLEGEQCEIS KCPQPCRNGG KCIG--KCKC bmy_06824T0/1-303 ---------- ---------- ---------- ---------- ---------- BACU008192/1-379 SATCFNGGTC FYPGKCICPP ALEGEQCEIS KCPQPCRNGG KCIGKSKCKC 351 400 ENSP00000286574/1-379 SKGYQGDLCS KPVCEPGCGA HGTCHEPNKC QCQEGWHGRH CNKRYEASLI ENSBTAP00000019636/1-381 SKGYQGDLCS KPVCKPGCGT HGTCHEPNKC QCREGWHGRH CNKRYGASLL ENSTTRP00000010955/1-376 SKGYQGD-CS KPVCEPGCGT HGTCHEPNKC QCQEGWHGRH CNKRYGASLT bmy_06824T0/1-303 ---------- ---------- ---------- ---------- ----YGASLT BACU008192/1-379 SKGYQGDLCS KPVCEPGCGT HGTCHEPNKC QCQEGWHGRH CNKRYGASLT 401 450 ENSP00000286574/1-379 HALRPAGAQL RQHTPSLKKA EERRDPPESN YIW ENSBTAP00000019636/1-381 HTLRPAGAQL RQHTPSVKKA EERQDPPESN YIW ENSTTRP00000010955/1-376 HALRPAGAGL RQHTPSLKKA EERQDPPESN YIW bmy_06824T0/1-303 HALRPAGTGL RQHTPSLKKA EERQDPPESN YIW BACU008192/1-379 HALRPAGAGL RQHTPSLKKA EERQDPPESN YIW