KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:08:44 2014 Check: 00 ..
Name: ENSTTRP00000011545/1-529 Len: 536 Check: 6332 Weight: 1.00
Name: ENSP00000266068/1-530 Len: 536 Check: 7096 Weight: 1.00
Name: ENSBTAP00000019648/1-536 Len: 536 Check: 7712 Weight: 1.00
Name: BACU011237/1-512 Len: 536 Check: 280 Weight: 1.00
Name: bmy_14487T0/1-289 Len: 536 Check: 6148 Weight: 1.00
//
1 50
ENSTTRP00000011545/1-529 MATPDVSVHM EEVVVVTTPD TAADGSGMEE VKTVLVTTNL APHGSDLTEG
ENSP00000266068/1-530 MATPDVSVHM EEVVVVTTPD TAVDGSGVEG VKTVLVTTNL APHGGDLTED
ENSBTAP00000019648/1-536 MATPDVSVHM EEVVVVTTPD TAADGSGVEE VKTVLVTTNL APHGGDLMED
BACU011237/1-512 MATPDVSVHM EEVVVVTTPD TAADGSGVEE VKTVLVTTNL TPHGSDLTEG
bmy_14487T0/1-289 ---------- ---------- ---------- ---------- ----------
51 100
ENSTTRP00000011545/1-529 NMETENAAAA AAAAFTASSQ LKEAVLVKMA EEEESLEAEI VYPITCGDSR
ENSP00000266068/1-530 NMETENAAAA AAAAFTASSQ LKEAVLVKMA EEGENLEAEI VYPITCGDSR
ENSBTAP00000019648/1-536 NMDTENAAAA AAAAFTASSQ LKEAMLVKMA EEEESLEAEI VYPITCGDSR
BACU011237/1-512 NMETENAAAA AAAAFTASSQ LKEAVLVKMA EEEESLEAEI VYPITCGDSR
bmy_14487T0/1-289 ---------- ---------- --------MA EEEESLEAEI VYPITCGDSR
101 150
ENSTTRP00000011545/1-529 ANLIWRKFVC PGINVKCVQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000266068/1-530 ANLIWRKFVC PGINVKCVQY DEHVISPKEF VHLAGKSTLK DWKRAIRMNG
ENSBTAP00000019648/1-536 ANLIWRKFVC PGINVKCVQY DEHVISPKEF VHLAGKSTLK DWKRAIRMNG
BACU011237/1-512 ANLIWRKFVC PGINVKCVQY DEHVISPKEF VHLAGKSTLK DWKRAIRMNG
bmy_14487T0/1-289 ANLIWRKFVC PGINVKCVQY DEHVISPKEF VHLAGKSTLK DWKRAIRMNG
151 200
ENSTTRP00000011545/1-529 XXXXKIMDSG ELDFYQHD-V CSNTCRSTKI DLSGARASLG SPTPAEYIPL
ENSP00000266068/1-530 IMLRKIMDSG ELDFYQHDKV CSNTCRSTKI DLSGARVSLS SPTSAEYIPL
ENSBTAP00000019648/1-536 IMLRKIMDSG ELDFYQHDRV CSNTCRSTKI DLSGARASLG SPTPTEYIPL
BACU011237/1-512 IMLRKIMDSG ELDFYQHDRV CSNTCRSTKI DLSGARASLG SPTPAEYIPL
bmy_14487T0/1-289 IMLRKIMDSG ELDFYQHDRV CSNTCRSTKI DLSGARASLG SPTPAEYIPL
201 250
ENSTTRP00000011545/1-529 TPATADVNGA PATITIETCE DPGDWTTAVG DDTFAFWRGL KDAGLLDEVI
ENSP00000266068/1-530 TPAAADVNGS PATITIETCE DPGDWTAAIG DDTFTFWRGL KDAGLLDEVI
ENSBTAP00000019648/1-536 TPATADVNGA PATITIETCE DPGDWTTAVG DDTFAFWRGL KDAGLLDEVI
BACU011237/1-512 TPATAD---- ---------- ---------- DDTFAFWRGL KDAGLLDEVI
bmy_14487T0/1-289 TPATADVNGA PATITIETCE DPGDWTTAVG DDTFAFWRGL KDAGLLDEVI
251 300
ENSTTRP00000011545/1-529 QEFHQELVET MKGLQQRVQD PPLQLRDAVL LNNIVQNFGM LDLVKKVLAS
ENSP00000266068/1-530 QEFHQELVET MRGLQQRVQD PPLQLRDAVL LNNIVQNFGM LDLVKKVLAS
ENSBTAP00000019648/1-536 QEFHQELVET MKGLQQRVQD PPLQLRDAVL LNNIVQNFGM LDLVKKVLAS
BACU011237/1-512 QEFHQELVET MKGLQQRVQD PPLQLRDAVL LNNIVQNFGM LDLVKKVLAS
bmy_14487T0/1-289 QEFHQELVET MKGLQQRVQD PPLQLRDAVL LNNIVQNFGM LDLVKKVLAS
301 350
ENSTTRP00000011545/1-529 HKCQMDRSRE QYARDLAALE QQCDEHRRRA KELKHKSQHL SNVLMTLTPV
ENSP00000266068/1-530 HKCQMDRSRE QYARDLAALE QQCDEHRRRA KELKHKSQHL SNVLMTLTPV
ENSBTAP00000019648/1-536 HKCQMDRSRE QYARDLAALE QQCDEHRRRA KELKHKSQHL SNVLMTLTPV
BACU011237/1-512 HKCQMDRSRE QYARDLAALE QQCDEHRRRA KELKHKSQHL SNVLMTLTPV
bmy_14487T0/1-289 HKCQMDRSRE QYARDLAALE QQCDEHRRRA KELKHKSQHL SNVLMTLAPV
351 400
ENSTTRP00000011545/1-529 SLPPAVKRPR LARATSGPAA IASQVLAQSA QIALTPGVPV SQLTSVPLGK
ENSP00000266068/1-530 SLPPPVKRPR LARATSGPAA MASQVLTQSA QLALGPGVPV PQLTSVPLGK
ENSBTAP00000019648/1-536 SLPPPVKRPR LARATSGPAA IASQVLAQSA QIALTPGVPV SQLTSVPLGK
BACU011237/1-512 SLPPPVKRPR LARATSGPAA IASQVLAQSA QIALTPGVPV SQLTGVPLGK
bmy_14487T0/1-289 ALPAPAKRPR LARATSG--- ---------- ---------- ----------
401 450
ENSTTRP00000011545/1-529 VVSTLPSPML GKAMPQAAPA SSPASPLLGG YTVLASSGTT FPSTVEIHPD
ENSP00000266068/1-530 VVSTLPSTVL GKGSLQAPPA SSPASPLLGG YTVLASSGST YPSTVEIHPD
ENSBTAP00000019648/1-536 VVSTLPSPVL GKAAPQVAPA SSPASPLLGG YTVLASSGTT FPNTVEIHPD
BACU011237/1-512 VVSTLPSPML GKAMPQAAPA SSPASPLLGG YTVLASSGTT FPSTVEIHPD
bmy_14487T0/1-289 ---------- ---------- ---------- ---------- ----------
451 500
ENSTTRP00000011545/1-529 ASSLTVLSTA AMQDGSTVVK VVSPLQLLTL PGLGPTLQNV AQVSPGGSTI
ENSP00000266068/1-530 ASSLTVLSTA AVQDGSTVFK VVSPLQLLTL PGLGPTLQNV AQASPGSSTI
ENSBTAP00000019648/1-536 ASSLTVLSTA AMQDGSTVVK VVSPLQLLTL PGLGPTLQNV AQVSPGGSTI
BACU011237/1-512 ASSLTVLSTA AMQDGSTVVK VVSPLQLLAL PGLGPTLQNV AQVSPGGSTI
bmy_14487T0/1-289 ---------- ---------- ---------- ---------- ----------
501 550
ENSTTRP00000011545/1-529 VTVPTG---- --AAPGPEEH TATIEVAAMA EGHEHK
ENSP00000266068/1-530 VTVPAG---- --AAPGPEEH TATIEVAAMA EDHERK
ENSBTAP00000019648/1-536 VTVPTGTVES AVAAPGPEEH TATIEVAAMA EGHEHK
BACU011237/1-512 VTVPTGAVES AVAAPGPEEH TATIEVAAMA EGHEHK
bmy_14487T0/1-289 ---------- ---------- ---------- ------