KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:45 2014 Check: 00 .. Name: ENSP00000377492/1-725 Len: 1253 Check: 8106 Weight: 1.00 Name: ENSBTAP00000019652/1-799 Len: 1253 Check: 4269 Weight: 1.00 Name: bmy_12814T0/1-674 Len: 1253 Check: 3012 Weight: 1.00 Name: BACU003707/1-1122 Len: 1253 Check: 3425 Weight: 1.00 Name: ENSTTRP00000001085/1-724 Len: 1253 Check: 5231 Weight: 1.00 // 1 50 ENSP00000377492/1-725 ---------- ----MSFPKA PLKRFND--- ---PSGCA-- ---------- ENSBTAP00000019652/1-799 ---------- ----MSFPKA PLKRFND--- ---PSGCA-- ---------- bmy_12814T0/1-674 MNTSSKVWYH WPHGVAHGTT PLRSSNGADI LQSPPGRGGT ERAERTHRIS BACU003707/1-1122 ---------- ----MSFSKA PLKRFND--- ---PSGCA-- ---------- ENSTTRP00000001085/1-724 ---------- ----MSFSKA PLKRFND--- ---PSGCA-- ---------- 51 100 ENSP00000377492/1-725 ---PSP---- --------GA YDVKTLEVLK GPVSFQKSQR FKQQK-ESKQ ENSBTAP00000019652/1-799 ---PSP---- --------GA YDVKTSEVLK GPVSFQKSQR FQKQKAESQQ bmy_12814T0/1-674 AFEPRPGFSA RVTAHAQEGA YDVKTSEVLK GPVSFRKSQR FKKQKAESQQ BACU003707/1-1122 ---PSP---- --------GA YDVKTSEVLK GPVSFRKSQR FKNQKAESQQ ENSTTRP00000001085/1-724 ---PSP---- --------GA YDVKTSEVLK GPVSFRKSQR FKTQK-ESQQ 101 150 ENSP00000377492/1-725 NLNVDKDTTL PASARKVKSS ESKKESQKND KDLKILEKEI RVLLQERGAQ ENSBTAP00000019652/1-799 NLNVDKETTL PVSARKVKTS GLKKESQKND KDLKMLEKEI RILVQERGAQ bmy_12814T0/1-674 NLNVDKDTTL PASSRKVKTS GLKKESQKNE KDLKMLEKEI RVLVQERGAQ BACU003707/1-1122 NLNVDKDTTL PASSRKVKTS GLKKESQKNE KDLKMLEKEI RVLVQERGAQ ENSTTRP00000001085/1-724 NLNVDKDTTL PASARKVKTS GLKKESQKNE KDLKMLVKEI RVLVQERGAQ 151 200 ENSP00000377492/1-725 DRRIQDLETE LEKMEARLNA ALREKTSLSA NNATLEKQLI ELTRTNELLK ENSBTAP00000019652/1-799 DRRIQDLEAE VEKMEAKLNA AVREKTSLSA SNASLEKQLI ELTRTNELLK bmy_12814T0/1-674 DKRIQDLEAE LEKXEAKLNA AVREKTSLSA SNASLEKQLI ELTRTNELLK BACU003707/1-1122 DKRIQDLEAE LEKMEAKLNA TVREKTSLSA SNASLEKQLI ELTRTNELLK ENSTTRP00000001085/1-724 DKRIQDLEAE LEKMEAKLNA AVREKTSLSA SNASLEKQLI ELTRTNELLK 201 250 ENSP00000377492/1-725 SKFSENGNQK NLRILSLELM KLRNKRETKM RGMMAKQEGM EMKLQVTQRS ENSBTAP00000019652/1-799 SKFSEDNNQK NLRILSLELM KLRNKRETKM RSMMAKQEGM EVKLQLTQKN bmy_12814T0/1-674 SKFSDDSNQK NLRILSLELM KLRNKREIKM XSMMAKQEGM EVKLQVTQKN BACU003707/1-1122 SKFSDDSNQK NLRILSLELM KLRNKREIKM KSMMAKQEGM EVKLQVTQKN ENSTTRP00000001085/1-724 SKFSDDSNQK NLRILSLELM KLRNKREIKM RSMMAKQEGM EVKLQVTQKN 251 300 ENSP00000377492/1-725 LEESQGKIAQ LEGKLVSIEK EKIDEKSETE KLLEYIEEIS CASDQVEKYK ENSBTAP00000019652/1-799 LVESQEKIVQ LEGKLVSIEK EKIDEKSETE KLLEYIEEIS CASDQVEKYK bmy_12814T0/1-674 LEESQEKIAQ LEGKL----- ---------- ---------- ---------- BACU003707/1-1122 LEESQEKIAQ LKGKLISIEK EKIDEKSETE KLLEYIEEIS CASDQVEKYK ENSTTRP00000001085/1-724 LEESQEKIAQ LEGKIISIEK EKIDEKSETE KLLEYIEEIS CASDQVEKYK 301 350 ENSP00000377492/1-725 LDIAQLEENL KEKNDEILSL KQSLEENIVI LSKQVEDLNV KCQLLEKEKE ENSBTAP00000019652/1-799 LDIAQLEENL KEKNHEVLSL KQSLEENITI LSKQIEDMKS KYQVLEEEKE bmy_12814T0/1-674 ---------- ---------L KQSLEENVAI LSKQVEDMNA KCQLLEKEKE BACU003707/1-1122 LDIAQLEENL KEKNHEVLSL KQSLEENVAI LSKQVEDMNA KCQLLEKEKE ENSTTRP00000001085/1-724 LDIAQLEENL KEKNHEVLSL KQSLEENVAI LSKQVEDMNA KCQLLEKEKE 351 400 ENSP00000377492/1-725 DHVNRNREHN ENLNAEMQNL KQKFILEQQE REKLQQKELQ IDSLLQQEKE ENSBTAP00000019652/1-799 DLINRNRERD ENLNSEIQSL KERSILEKQE HEELQQKVLQ MDSLLQQEKE bmy_12814T0/1-674 DLINRDREQD ENLNSEMQNL KERSVLEQQE HEELQQKVLQ IDSLLQQEKE BACU003707/1-1122 DLINRDREQD ENLNSEMQNL KERSVLEQQE HEELQQKVLQ IDSLLQQEKE ENSTTRP00000001085/1-724 DLINRDREQD ENLNSEIRNL KERSVLKQQE HEELQQKVLQ IDSLLQQEKE 401 450 ENSP00000377492/1-725 LSSSLHQKLC SFQEEMVKEK NLFEEELKQT LDELDKLQQK EEQAERLVKQ ENSBTAP00000019652/1-799 LSSGLQQKLC SFQEEMIKER TLFEGELKQA LDELDKLQQK EEQAENLLKQ bmy_12814T0/1-674 LSSSLQQKLC SFQEEMVKER NLFEGELKQA LDELDKLQQK EEQVESL--- BACU003707/1-1122 LSSSLQQKLC SFQEEMVKER NLFEGELKQA LDELDKLQQK EEQVESLVKQ ENSTTRP00000001085/1-724 LSSSLQQKLC SFQEEMVKER NLFEGELKQA LDELDKLQQK EEQVESLVKQ 451 500 ENSP00000377492/1-725 LEEEAKSRAE ELKLLEEKLK GKEAELEKSS AAHTQATLLL QEKYDSMVQS ENSBTAP00000019652/1-799 LEEEAESRAA ELKRLKEKLK GKEAELEESN AAYTQATLLL QEKHNSTVQN bmy_12814T0/1-674 ---------- -------KLN WRKVTL-LTL RPHCFC---- --RKGITVQC BACU003707/1-1122 LEEESGSRGE EIKLLEERLK GKEVELEKSN AAHAQATLLL QERYNSTVQS ENSTTRP00000001085/1-724 LEEESESRGE ELKLMEERLK GKEAELEKSN AAHAQTTLLL QERYNSTVQS 501 550 ENSP00000377492/1-725 LEDVTAQFE- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 LEDVTAQFES VFTLYNFGWR ALLFLSCSLD SCHSSFFFML SNLNLIVNSS bmy_12814T0/1-674 -RAWEMLLL- ---------- ---------- ---------- ---------- BACU003707/1-1122 LGDVTAQFE- ---------- ---------- ---------- ---------- ENSTTRP00000001085/1-724 LRDVTAQFE- ---------- ---------- ---------- ---------- 551 600 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---SYKALTA ENSBTAP00000019652/1-799 EKPFLNHEAK SNMFCSLPLK HLEQSLQQPE EAFFSITRKI IKISYKASTA bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---NLKASAA BACU003707/1-1122 ---------- ---------- ---------- ---------- ---SYKASAA ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---SYKASAA 601 650 ENSP00000377492/1-725 SEIEDLKLEN SSLQEKAAKA GKNAEDVQHQ ILATESSNQE YVRMLLDLQT ENSBTAP00000019652/1-799 SELKDLKVQN ESLKEKLAKA EQSAEDVRDQ VLATENSNQE YARMLLDLQT bmy_12814T0/1-674 SEIEDLKVEN MSLHEKVAKA EKSAEDFQHE ILATENANQE YARMLLDLQT BACU003707/1-1122 SEIEDLKVEN MSLHEKVAKA EKSAEDVQHA ILATENANQE YARMLLDLQT ENSTTRP00000001085/1-724 SEIEDLKVEN MSLHEKVAKA EKSAEDVQHE ILATENANQE YARMLLDLQT 651 700 ENSP00000377492/1-725 KSALKETEIK EITVSFLQKI TDLQNQLKQQ EEDFRKQLED EEGRKAEKEN ENSBTAP00000019652/1-799 KSALKEAEMK EITVSSLKRI SDLQNQLKQQ SEDFKKQLEE EEARKAGKEN bmy_12814T0/1-674 KSALKEAEVK EITVSSLKKI TDLQHQLKQQ GEDFKKQLEK GEARKAGKEN BACU003707/1-1122 KSALKEAEVK EITVSSLKKI TDLQHQLKQQ GEDFKKQLEK GEARKAGKEN ENSTTRP00000001085/1-724 KSTLKEAEVK EITVSSLKKI TDLQNQLKQQ GEDFKKQLEK GEARKAGKEK 701 750 ENSP00000377492/1-725 TTAELTEEIN KWRLLYEELY NKTKPFQLQL DAFEVEKQAL LNEHGAAQEQ ENSBTAP00000019652/1-799 SIAELTEEMN KWRLLYEELY NKTKPFQLQL DAFEAEKQAL LNEHGAAQEQ bmy_12814T0/1-674 STAELTEEMN KWRLLYEELY NKTKPFQLQL DAFEAEKQAL LNEHGAAQEQ BACU003707/1-1122 SMAELTEEMN KWRLLYEELY NKTKPFQLQL DAFEAEKQAL LNEHGAAQEQ ENSTTRP00000001085/1-724 STAELTEEMN KWRLLYEELY NKTKPFQLQL DAFEAEKQAL LNEHGAAQEQ 751 800 ENSP00000377492/1-725 LNKIRDSYAK LLGHQNLKQK IKHVVKLKDE NSQLKSEVSK LRCQLAKKKQ ENSBTAP00000019652/1-799 LNNLRDSYAK LLGHQNLKQK IKHVVKLKDE NSNLNSEVLK LRAQLTKRKQ bmy_12814T0/1-674 LNKLRDSYAK LLGHQNLKQK IKHV------ ------EVSK LRAQLAKRKQ BACU003707/1-1122 LNKLRDSYAK LLGHQNLKQK IKHVVKLKDE NSQLKSEVSK LRAQLAKRKQ ENSTTRP00000001085/1-724 LNKLRDSYAK LLGHQNLKQK IKHVVKLKDE NSQLKSEVSK LRAQLAKRKQ 801 850 ENSP00000377492/1-725 SETKLQEELN KVLGIKHFDP SKAFHHESKE NFALKTPLKE GNT------- ENSBTAP00000019652/1-799 SEAKLQEELN KVLGIKHFDP SKAFLHESKE NFVPKTPLKE GNT------- bmy_12814T0/1-674 RETRLQEELN KVLGIKHFDP SKAFLHESKE NFVLKTPLKE ---------- BACU003707/1-1122 RETRLQEELN KVLGIKHFDP SKAFLHESKE NFVLKTPLKE AAVTGKEAVY ENSTTRP00000001085/1-724 HETKLQEELN KVLGIKHFDP SKSFLHESKE NFVLKTPLKE GNT------- 851 900 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 KEFQQNNWHA VGCGFRRARP KFEQVNLLDS SAVHHIIYDF QPHVIVHCAA ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 ERRPDVVENQ PDAASQLNVA ASGNLAKEAA AVGAFLIYIS SDYVFDGINP ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 PYREEDIPSP LNLYGKTKLE GERAVLENNL GAAVLRIPVL YGEVEKLEES ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 AVTVMFDKVQ FSNKSANMDH WQQRFPTHVK DVATVCRQLA EKRMLGRHLL ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 SYSSTAVVSS GVIFISTKTK FDHPIDPVSM CLGILQTEAR RQESRFVQQD ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 DQIDPSIKGT FHWSGNEQMT KYEMACAIAD TFNLPSSHLR PITDSPVLGA ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000377492/1-725 --------NC YRAPM----- -E-------- ------CQES WK-------- ENSBTAP00000019652/1-799 --------NC S--------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- -ALSKLSIFV KI-------- ------C--- ---------- BACU003707/1-1122 QRPRNAQLDC SKLETLGIGQ RTPFRIGIKE SLWPFLIDKR WRQTASVSQL ENSTTRP00000001085/1-724 --------NC SALME---FQ ES-------- ------CK-- ---------- 1201 1250 ENSP00000377492/1-725 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019652/1-799 ---------- ---------- ---------- ---------- ---------- bmy_12814T0/1-674 ---------- ---------- ---------- ---------- ---------- BACU003707/1-1122 NIPDPWAMAL MPVTKWATAP GRGPSPSPGG IASAALQSTM YRESTKEKQL ENSTTRP00000001085/1-724 ---------- ---------- ---------- ---------- ---------- 1251 1300 ENSP00000377492/1-725 --- ENSBTAP00000019652/1-799 --- bmy_12814T0/1-674 --- BACU003707/1-1122 GVL ENSTTRP00000001085/1-724 ---