KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:52 2014 Check: 00 .. Name: ENSP00000282141/1-174 Len: 357 Check: 4132 Weight: 1.00 Name: ENSBTAP00000019664/1-174 Len: 357 Check: 2602 Weight: 1.00 Name: bmy_01659T0/1-345 Len: 357 Check: 6609 Weight: 1.00 Name: BACU012655/1-284 Len: 357 Check: 3531 Weight: 1.00 Name: ENSTTRP00000014629/1-174 Len: 357 Check: 3040 Weight: 1.00 // 1 50 ENSP00000282141/1-174 MGKITFYEDR AFQGRSYETT TDCPNLQPYF SRC------- ---------- ENSBTAP00000019664/1-174 MGKITFYEDR GFQGRCYQCS SDCPNLQPYF SRC------- ---------- bmy_01659T0/1-345 ---ITFYEDR GFQGRCYECS SDCPNLQPYF SRCNSIRVDS GCWMLYERPN BACU012655/1-284 MGKITFYEDR GFQGRCYECS SDCPNLQPYF SRCNSIRVDS GCWMLYERPN ENSTTRP00000014629/1-174 MGKITFYEDR GFQGRCYECS SDCPNLQPYF SRC------- ---------- 51 100 ENSP00000282141/1-174 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019664/1-174 ---------- ---------- ---------- ---------- ---------- bmy_01659T0/1-345 YQGHQYFLRR GDYPDYQQWM GFNDSIRSCC LIPQTSSHRL RLYEREDHKG BACU012655/1-284 YQGHQYFLRR GDYPDYQQWM GLNDSVRSCR LIPPQP---- ---------- ENSTTRP00000014629/1-174 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000282141/1-174 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019664/1-174 ---------- ---------- ---------- ---------- ---------- bmy_01659T0/1-345 LMVELSEDCS CIQDRFHLNE VRSLHVLEGC WVLYEMPSYC GQQYLLRPQE BACU012655/1-284 ---------S CYIDPLRCQG PITRNLHHPC ---------- ---------- ENSTTRP00000014629/1-174 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000282141/1-174 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019664/1-174 ---------- ---------- ---------- ---------- ---------- bmy_01659T0/1-345 YRRYQDWGAM DAKAGSVRRI TFYEDRGFQG RHYEIRLYER EDYRGQMIEI BACU012655/1-284 ---------- ---QPAMGKI TFYEDRGFQG RHY------- --------EC ENSTTRP00000014629/1-174 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000282141/1-174 ---------- ------NSIR VESGCWMLYE RPNYQGQQYL LRRGEYPDYQ ENSBTAP00000019664/1-174 ---------- ------NSIR VDSGCWMLYE RPNYQGHQYF LRRGDYPDYQ bmy_01659T0/1-345 TEDCSSLQDR FHFNEIYSLN VLEGSWVLYE LPNYRGRQYL LRPGEYRRYY BACU012655/1-284 SSDCPNLQP- -YFSRCNSIR VDSGCWMLYE RPNYQGHQYF LRRGDYPDYQ ENSTTRP00000014629/1-174 ---------- ------NSIR VDSGCWMLYE RPNYQGHQYF LRRGDYPDYQ 251 300 ENSP00000282141/1-174 QWMGLSDSIR SCCLIPQTVS HRLRLYERED HKGLMMELSE DCPSIQDRFH ENSBTAP00000019664/1-174 QWMGFNDSIR SCCLISDTSS HRLRLYERED QKGLIAELSE DCPCIQDRFR bmy_01659T0/1-345 DWGAMN---- -----AKTSS HRLRIYERED YRGQMVELTE DCSSLRDRFH BACU012655/1-284 QWMGLNDSVR SCRLIPHTSS HRLRLYERED HKGLMVELSE DCSCIQDRFH ENSTTRP00000014629/1-174 QWMGFNDSVR SCRLIPTTSS HRLRLYERED HKGLMVELSE DCSCIQDRFH 301 350 ENSP00000282141/1-174 LSEIRSLHVL EGCWVLYELP NYRGRQYLLR PQEYRRCQDW GAMDAKAGSL ENSBTAP00000019664/1-174 LSEVRSLHVL EGCWVLYEMP NYRGRQYLLR PQEYRRYQDW GAVDAKAGSL bmy_01659T0/1-345 FSEIRSLHVL EGWWVLYEMP NYRGXQYLLR PGDYRHYHDW GALDARVGSL BACU012655/1-284 LNEVRSLHVL EGCWVLYEMP SYCGRQYLLR PQEYRRYQDW GAMDAKAGSV ENSTTRP00000014629/1-174 LNEVRSLHVL EGCWVLYEMP NYCGRQYLLR PQEYRRYHDW GAMDAKAGSL 351 400 ENSP00000282141/1-174 RRVVDLY ENSBTAP00000019664/1-174 RRVVDLY bmy_01659T0/1-345 RRAVDFY BACU012655/1-284 RRVVDLY ENSTTRP00000014629/1-174 RRVVDLY