KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:56 2014 Check: 00 .. Name: ENSTTRP00000009065/1-842 Len: 865 Check: 8206 Weight: 1.00 Name: ENSP00000013125/1-846 Len: 865 Check: 7234 Weight: 1.00 Name: BACU015329/1-507 Len: 865 Check: 7090 Weight: 1.00 Name: bmy_06173T0/1-512 Len: 865 Check: 5802 Weight: 1.00 Name: ENSBTAP00000019681/1-846 Len: 865 Check: 7930 Weight: 1.00 // 1 50 ENSTTRP00000009065/1-842 MEAPLRPGAD ILRRNPQHDY ELVQRVGSGT YGDVYKARNI HTGELAAVKI ENSP00000013125/1-846 MEAPLRPAAD ILRRNPQQDY ELVQRVGSGT YGDVYKARNV HTGELAAVKI BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019681/1-846 MEAPLRPGAD ILRRNPQQDY ELVQRVGSGT YGDVYKARNI HTGELAAVKI 51 100 ENSTTRP00000009065/1-842 I-LEPGDDFS LIQQEIFMVK ECKHCN-VAY FGSYLNREKL WICMEYCGGG ENSP00000013125/1-846 IKLEPGDDFS LIQQEIFMVK ECKHCNIVAY FGSYLSREKL WICMEYCGGG BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019681/1-846 IKLEPGDDFS LIQQEIFMVK ECKHCNIVAY FGSYLSREKL WICMEYCGGG 101 150 ENSTTRP00000009065/1-842 SLQDIYHVTG PLSELQIAYV CRETLQGLAY LHTKGKMHRD IKGANISLTD ENSP00000013125/1-846 SLQDIYHVTG PLSELQIAYV CRETLQGLAY LHTKGKMHRD IKGANILLTD BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019681/1-846 SLQDIYHVTG PLSELQIAYV CRETLQGLAY LHTKGKMHRD IKGANILLTD 151 200 ENSTTRP00000009065/1-842 HGDVKLADFG VAAKITATIA KRKSFIGTPY WMAPEVAAVE KNGGYNQLCD ENSP00000013125/1-846 HGDVKLADFG VAAKITATIA KRKSFIGTPY WMAPEVAAVE KNGGYNQLCD BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019681/1-846 HGDVKLADFG VAAKITATIA KRKSFIGTPY WMAPEVAAVE KNGGYNQLCD 201 250 ENSTTRP00000009065/1-842 IWAVGITAIE LGELQPPMFD LHPMRALFLM SKSNFQPPKL KDKTKWSSTF ENSP00000013125/1-846 IWAVGITAIE LGELQPPMFD LHPMRALFLM SKSNFQPPKL KDKTKWSSTF BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019681/1-846 IWAVGITAIE LGELQPPMFD LHPMRALFLM SKSNFQPPKL KDKTKWSSTF 251 300 ENSTTRP00000009065/1-842 HNFVKIALTK NPKKRPTAER LLTHTFVGQP GLSRALAVEL LDKVNNPDNH ENSP00000013125/1-846 HNFVKIALTK NPKKRPTAER LLTHTFVAQP GLSRALAVEL LDKVNNPDNH BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019681/1-846 HNFVKIALTK NPKKRPTAER LLTHTFVGQP GLSRALAVEL LDKVNNPDNH 301 350 ENSTTRP00000009065/1-842 AHYTEGDDDD FEPHAIIRHT IRSTNRNARA ERTASEINFD KLQFEPPLRK ENSP00000013125/1-846 AHYTEADDDD FEPHAIIRHT IRSTNRNARA ERTASEINFD KLQFEPPLRK BACU015329/1-507 ---------- ---------- ---------- ---------- ---------- bmy_06173T0/1-512 ---------- --PHAIIRHT IRSTNRNARA ERTASEINFD KLQFEPPLRK ENSBTAP00000019681/1-846 THYTEGDDDD FEPHAVIRHT IRSTNRNARA ERTASEINFD KLQFEPPLRK 351 400 ENSTTRP00000009065/1-842 ETEARDEMGV SSDPNFLLRW NPFVDGANTG KSTSKRAIPP PLPPK-RISS ENSP00000013125/1-846 ETEARDEMGL SSDPNFMLQW NPFVDGANTG KSTSKRAIPP PLPPKPRISS BACU015329/1-507 -------MGV SSDPNFLLRW NPFVDGANTG KSTSKRAIPP PLPPKPRVNS bmy_06173T0/1-512 ETEARDEMGV SSDPNFLLRW NPFVDGANTG KSTSKRAIPP PLPPKPRINS ENSBTAP00000019681/1-846 ETEARDEMGV SSDPNFLLRW NPFVDGANTG KSTSKRAIPP PLPPKPRINS 401 450 ENSTTRP00000009065/1-842 YLED-LQDEE KSSTXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXX---- ENSP00000013125/1-846 YPEDNFPDEE KASTIKHCPD SESRAPQILR RQSSPSCGPV AETSSI---- BACU015329/1-507 YPEDNLPDEE KSSTVKRCPD SENRAPQVLR RQSSPSCGPV AETSSIGMAS bmy_06173T0/1-512 YPEDNLPDEE KSSTVKRCPD SENRAPQVLR RQSSPSCGPV AETSSI---- ENSBTAP00000019681/1-846 YPEDNLPDEE KSSTVKRCPD SENRAPQVLR RQSSPSCGPV AETSSI---- 451 500 ENSTTRP00000009065/1-842 ---------- -----XNGDG ISKLISENTE GSAQAPQLPR KKDKRDFPKP ENSP00000013125/1-846 ---------- -----GNGDG ISKLMSENTE GSAQAPQLPR KKDKRDFPKP BACU015329/1-507 SVSRPGVHTA RYCDLGNGDG ISKLMSENTE GSAQAPQLPR KKDKRDFPKP bmy_06173T0/1-512 ---------- -----GNGDG ISKLISENTE GSAQAPQLPR KKDKRDFPKP ENSBTAP00000019681/1-846 ---------- -----GNGDG ISKLISENTE GSAQAPQLPR KKDKRDFPKP 501 550 ENSTTRP00000009065/1-842 VINGLPPTPK VLMGACFSKV FDGCPLKINC ATSWIHPDTK DQYIIFGTED ENSP00000013125/1-846 AINGLPPTPK VLMGACFSKV FDGCPLKINC ATSWIHPDTK DQYIIFGTED BACU015329/1-507 VINGLPPTPK VLMGACFSKV FDGCPLKINC ATSWIHPDTK DQYIIFGTED bmy_06173T0/1-512 VINGLPPTPK VLMGACFSKV FDGCPLKINC ATSWIHPDTK DQYIIFGTED ENSBTAP00000019681/1-846 VINGLPPTPK VLMGACFSKV FDGCPLKINC ATSWIHPDTK DQYIIFGTED 551 600 ENSTTRP00000009065/1-842 GIYTLNLNEL HEATMEQLFP RKCTWLYVIN NTLMSLSVGK TFQLYSHNLI ENSP00000013125/1-846 GIYTLNLNEL HEATMEQLFP RKCTWLYVIN NTLMSLSVGK TFQLYSHNLI BACU015329/1-507 GIYTLNLNEL HEATMEQLFP RKCTWLYVIN NTLMSLS-GK TFQLYSHNLI bmy_06173T0/1-512 GIYTLNLNEL HEATMEQLFP RKCTWLYVIN NTLMSLS-GK TFQLYSHNLI ENSBTAP00000019681/1-846 GIYTLNLNEL HEATMEQLFP RKCTWLYVIN NTLMSLSEGK TFQLYSHNLI 601 650 ENSTTRP00000009065/1-842 ALFEQAKKPG LAAHIQTHRF PDRILPRKFA LTTKIPDTKG CHKCCIVRNP ENSP00000013125/1-846 ALFEHAKKPG LAAHIQTHRF PDRILPRKFA LTTKIPDTKG CHKCCIVRNP BACU015329/1-507 ALFEQAKKPG LAAHIQTHRF PDRILPRKFA LTTKIPDTKG CHKCCIVRNP bmy_06173T0/1-512 ALFEQAKKPG LAAHIQTHRF PDRILP---- ---------- -------RNP ENSBTAP00000019681/1-846 ALFEQAKKPG LAAHIQTHRF PDRILPRKFA LTTKIPDTKG CHKCCIVRNP 651 700 ENSTTRP00000009065/1-842 YTGHKYLCGA LQSGIVLLQW YEPMQKFMLI KHFDFPLPSP LNVFEMLVIP ENSP00000013125/1-846 YTGHKYLCGA LQSGIVLLQW YEPMQKFMLI KHFDFPLPSP LNVFEMLVIP BACU015329/1-507 YTGHKYLCGA LQSGIVLLQW YEPMQKFMLI KHFDFPLPSP LNVFEMLVIP bmy_06173T0/1-512 YTGHKYLCGA LQSGIVLLQW YEPMQKFMLI KHFDFPLPSP LNVFEMLVIP ENSBTAP00000019681/1-846 YTGHKYLCGA LQSGIVLLQW YEPMQKFMLI KHFDFPLPSP LNVFEMLVIP 701 750 ENSTTRP00000009065/1-842 EQEYPMVCVA ISKGTELNQV VQFETINLNS ASSWFTEIGG GSQQLDSIHV ENSP00000013125/1-846 EQEYPMVCVA ISKGTESNQV VQFETINLNS ASSWFTEIGA GSQQLDSIHV BACU015329/1-507 EQEYPMVCVA ISKGTELNQV VQFETINLNS ASSWFTEIGG GSQQLDSIHV bmy_06173T0/1-512 EQEYPMVCVA ISKGTELNQV VQFETINLNS ASSWFTEIGG GSQQLDSIHV ENSBTAP00000019681/1-846 EQEYPMVCVA ISKGTELNQV VQFETINLNS ASSWFTEIGA GNQQLDSIHV 751 800 ENSTTRP00000009065/1-842 TQLERDTVLV CLDKFVKIVN LQGKLKSSKK LASELSFDFR IESVVCLQDS ENSP00000013125/1-846 TQLERDTVLV CLDKFVKIVN LQGKLKSSKK LASELSFDFR IESVVCLQDS BACU015329/1-507 TQLERDTVLV CLDKFVKIVN LQGKLKSSKK LASELSFDFR IESVVCLQDS bmy_06173T0/1-512 TQLERDTVLV CLDKFVKIVN LQGKLKSSKK LASELSFDFR IESVVCLQDS ENSBTAP00000019681/1-846 TQLERDTVLV CLDKFVKIVN LQGKLKSSKK LASELSFDFR IESVVCLQDS 801 850 ENSTTRP00000009065/1-842 VLAFWKHGMQ GKSFKSDEVT QEISDETRVF RLLGSDRVVV LESRPTENPT ENSP00000013125/1-846 VLAFWKHGMQ GKSFKSDEVT QEISDETRVF RLLGSDRVVV LESRPTENPT BACU015329/1-507 VLAFWKHGMQ GKSFKSDEVT QEISDETRVF RLLGSDRVVV LESRPTENPT bmy_06173T0/1-512 VLAFWKHGMQ GKSFKSDEVT QEISDETRVF RLLGSDRVVV LESRPTENPT ENSBTAP00000019681/1-846 VLAFWKHGMQ GKSFKSDEVT QEISDETRVF RLLGSDRVVV LESRPTENPT 851 900 ENSTTRP00000009065/1-842 AHSNLYILAG HENSY ENSP00000013125/1-846 AHSNLYILAG HENSY BACU015329/1-507 AHSNLYILAG HENSY bmy_06173T0/1-512 AHSNLYILAG HENSY ENSBTAP00000019681/1-846 AHSNLYILAG HENSY