KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:58 2014 Check: 00 .. Name: ENSP00000362795/1-415 Len: 415 Check: 8876 Weight: 1.00 Name: ENSBTAP00000019690/1-366 Len: 415 Check: 3539 Weight: 1.00 Name: ENSTTRP00000009948/1-411 Len: 415 Check: 1351 Weight: 1.00 Name: bmy_08424T0/1-358 Len: 415 Check: 1938 Weight: 1.00 Name: BACU010352/1-362 Len: 415 Check: 8541 Weight: 1.00 // 1 50 ENSP00000362795/1-415 MELRKYGPGR LAGTVIGGAA QSKSQTKSDS ITKEFLPGLY TAPSSPFPPS ENSBTAP00000019690/1-366 ---------- ---------- ---------- ---------- -------MVP ENSTTRP00000009948/1-411 LELRGRGLRR KATVTGGVAS RKPPQTKSDS VIIFLCPTI- -GPCSLCPPS bmy_08424T0/1-358 ---------- ---------- ---------- ---------- ---------- BACU010352/1-362 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362795/1-415 QVSDHQVLND AEVAALLENF SSSYDYGENE SDSCCTSPPC PQDFSLNFDR ENSBTAP00000019690/1-366 EMSERQEFQA SDFAYLLEN- -SSYDYGENE TYFCCTSPPC PQDFSLNFDR ENSTTRP00000009948/1-411 QMSERQEFQV SELDFLLEN- -SSYDYGEND SDPCCASPPC PQDFSLNFDR bmy_08424T0/1-358 -MSERQEFPA SDFAFLLEN- -SSYDYGENE SDSCCASPPC PQDFSLNFDR BACU010352/1-362 -MSERQEFPA SDFAFLLEN- -SSYDYGENE SDSCCASPPC PQDFSLNFDR 101 150 ENSP00000362795/1-415 AFLPALYSLL FLLGLLGNGA VAAVLLSRRT ALSSTDTFLL HLAVADTLLV ENSBTAP00000019690/1-366 TFLPVLYSLL FVLGLLGNGI VAVVLLSQRA ALSSTDTFLL HLAVADALLV ENSTTRP00000009948/1-411 AFLPVLYSLL FMLGLLGNGA VAAVLLSQRA VLSSTDTFLL HLAVADALLV bmy_08424T0/1-358 AFLPVLYSLL FMLGLLGNGA VAAVLLSQRA ALSSTDTFLL HLAVADALLV BACU010352/1-362 AFLPVLYSLL FMLGLLGNGA VAAVLLSQRA ALSSTDTFLL HLAVADALLV 151 200 ENSP00000362795/1-415 LTLPLWAVDA AVQWVFGSGL CKVAGALFNI NFYAGALLLA CISFDRYLNI ENSBTAP00000019690/1-366 LTLPLWAVDA AIQWVFGSGL CKVAGALFNI NFYAGALLLA CISFDRYLSI ENSTTRP00000009948/1-411 LTLPLWAVDA AVEWVFGSGL CKVAGALFNI NFYAGALLLA CISFDRYLSI bmy_08424T0/1-358 LTLPLWAVDA AVEWVFGSGL CKVAGALFNI NFYAGALLLA CISFDRYLSI BACU010352/1-362 LTLPLWAVDA AVEWVFGSGL CKVACSLFNI NFYAGALLLA CISFDRYLSI 201 250 ENSP00000362795/1-415 VHATQLYRRG PPARVTLTCL AVWGLCLLFA LPDFIFLSAH HDERLNATHC ENSBTAP00000019690/1-366 VHATQLYRRG PPTRVALTCV AVWGLCLLFA LPDFIFLSSH HDNRLNATHC ENSTTRP00000009948/1-411 VHATQLYRRG PPTRVAITCV AVWGLCLLFA LPDFIFLSAH HDKRLNATHC bmy_08424T0/1-358 VHATQLYRRG PPTRVALTCV AVWGLCLLFA LPDFIFLSAH HDKRLNATHC BACU010352/1-362 VHATQLYRRG PPTRVALTCV AVWGLCLLFA LPDFIFLSAH HDKRLNATHC 251 300 ENSP00000362795/1-415 QYNFPQVGRT ALRVLQLVAG FLLPLLVMAY CYAHILAVLL VSRGQRRLRA ENSBTAP00000019690/1-366 QYNFPQEGHT ALRILQLVAG FLLPLLVMAY CYARILAVLL VSRGQRRLRA ENSTTRP00000009948/1-411 QYSFPQVGRT ALRILQLVAG FLLPLLVMAY CYARILAVLL VSRGQRRLRA bmy_08424T0/1-358 QYSFPQVGRT ALRVLQLVAG FLLPLLVMAY CYARILAVLL VSRGQRRLRA BACU010352/1-362 QYSFPQVGRT ALRVLQLVAG FLLPLLVMAY CYARILAVLL VSRGQRRLRA 301 350 ENSP00000362795/1-415 MRLVVVVVVA FALCWTPYHL VVLVDILMDL GALARNCGRE SRVDVAKSVT ENSBTAP00000019690/1-366 MRLVVVVVVA FALCWTPYHL VVLVDTLMDL GALARNCGRE SSVDIAKSVT ENSTTRP00000009948/1-411 MRLVVVVVVA FALCWTPYHL VVLVDTLMEL GAVARNCGRE SSVDVAKSVT bmy_08424T0/1-358 MRLVVVVVVA FALCWTPYHL VVLVDTLMDL GAMARNCGRE SSVDVAKSVT BACU010352/1-362 MRLVVVVVVA FALCWTPYHL VVLVDTLMDL GAVARNCGRE SSVDVAKSVT 351 400 ENSP00000362795/1-415 SGLGYMHCCL NPLLYAFVGV KFRERMWMLL LRLGCPNQRG LQRQPSSSRR ENSBTAP00000019690/1-366 SGMGYMHCCL NPLLYAFVGV KFRERMWVLL VRLGCPDQRC HQRQPSASRR ENSTTRP00000009948/1-411 SGMGYMHCCL NPLLYAFVGV KFRERMWMLL MRLGCPNQRG HQRQPPASRR bmy_08424T0/1-358 SGMGYMHCCL NPLLYAFVGV KFRERMWMLL MRLGCPDQRG HQRQPPA--- BACU010352/1-362 SGMGYMHCCL NPLLYAFVGV KFRERMWILL MRLGCPDQRG HQRQPPASRR 401 450 ENSP00000362795/1-415 DSSWSETSEA SYSGL ENSBTAP00000019690/1-366 ESSWSETTEA SYSGL ENSTTRP00000009948/1-411 DSSWSETTEA SYSGL bmy_08424T0/1-358 -SSWSETTEA SYSGL BACU010352/1-362 DSSWSETTEA SYSGL