KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:08:58 2014 Check: 00 .. Name: ENSBTAP00000019702/1-261 Len: 288 Check: 6668 Weight: 1.00 Name: ENSP00000273920/1-261 Len: 288 Check: 6088 Weight: 1.00 Name: BACU018536/1-217 Len: 288 Check: 686 Weight: 1.00 Name: bmy_16217T0/1-243 Len: 288 Check: 5608 Weight: 1.00 Name: ENSTTRP00000001696/1-215 Len: 288 Check: 3595 Weight: 1.00 // 1 50 ENSBTAP00000019702/1-261 MVVLSVPAEV TVILLDIEGT TTPIAFVKDI LFPYVKENVE EYLQAHWEEE ENSP00000273920/1-261 MVVLSVPAEV TVILLDIEGT TTPIAFVKDI LFPYIEENVK EYLQTHWEEE BACU018536/1-217 MVVLSVPAEV TVILLDIEGT TTPIAFVKDI LFPYIKENVK EYLQTHWEEE bmy_16217T0/1-243 MVVLSVPAEV TVILLDIEGT TTPIAFVKDI LFPYIKENVK EYLQTHWEEE ENSTTRP00000001696/1-215 MVVLSVPAEV TVILLDIEGT TTPIAFVKDI LFPYIKENVK EYLQTHWEEE 51 100 ENSBTAP00000019702/1-261 ECQQDVRLLR KQAEEDSHLD GAVPIPAASG NGADDPQWMI QAVVDNVYWQ ENSP00000273920/1-261 ECQQDVSLLR KQAEEDAHLD GAVPIPAASG NGVDDLQQMI QAVVDNVCWQ BACU018536/1-217 ECQQDVNLLR KQAEEDSHLD GAVPIPAASG NGADDLQRVI QAVVDNVCWQ bmy_16217T0/1-243 ECQQDVSLLR KQAEEDSHLD GAVPIPAASG NGADDLQRMI QAVVDNVCWQ ENSTTRP00000001696/1-215 ECQQDINLLR KQAEEDSHLD GAVPIPAASG NGADDLQRMI QAVVDNVCWQ 101 150 ENSBTAP00000019702/1-261 MSLDRKTTAL KQLQGHMWRA AFKAGHMKAE ---------- ---------- ENSP00000273920/1-261 MSLDRKTTAL KQLQGHMWRA AFTAGRMKAE ---------- ---------- BACU018536/1-217 MSLDRKTTAL KQLQGHMWRA AFKAGSMKAE ---------- ---------- bmy_16217T0/1-243 MSLDRKTTAL KQLQGHMWRA AFKAGSMKAE YVAPQVTLNT SLATKANTFS ENSTTRP00000001696/1-215 MSLDRKTTAL KQLQGHMWRA AFKAGSMKAE ---------- ---------- 151 200 ENSBTAP00000019702/1-261 -------FFE DVVPAVRKWR EAGMKVYVYS SGSVEAQKLL FGHSTEGDIL ENSP00000273920/1-261 -------FFA DVVPAVRKWR EAGMKVYIYS SGSVEAQKLL FGHSTEGDIL BACU018536/1-217 -------FFE DVIPAVRKWR EAGMKVYIYS SGSVEAQKLL FGHSTEGDIH bmy_16217T0/1-243 TSPLSPVFFE DVVPAVRKWR EAGMKVYIYS SGSVEAQKLL FGHSTEGDIL ENSTTRP00000001696/1-215 -------FFE DVVPAVRKWR EAGMKVYIYS SGSVEAQKLL FGHSTEGDIL 201 250 ENSBTAP00000019702/1-261 ELVDGHFDTK IGHKVESESY QKIASSIGCS TNNILFLTDV SREASAAEEA ENSP00000273920/1-261 ELVDGHFDTK IGHKVESESY RKIADSIGCS TNNILFLTDV TREASAAEEA BACU018536/1-217 ELVDGHFDTK IGHKVESESY RKIASSIGCS TNNILFLTDV TRGE------ bmy_16217T0/1-243 ELVDGHFDTK IGHKVESESY RKIASSIGCS TNNILFLTDV TRG------- ENSTTRP00000001696/1-215 ELVDGHFDTK IGHKVESESY RKIASSIGCS TNNILFLTDV TR-------- 251 300 ENSBTAP00000019702/1-261 GVHVAVVVRP GNAGLTDDEK THFSLITSFS ELYLPSST ENSP00000273920/1-261 DVHVAVVVRP GNAGLTDDEK TYYSLITSFS ELYLPSST BACU018536/1-217 ---------- ---------- ---------- -------- bmy_16217T0/1-243 ---------- ---------- ---------- -------- ENSTTRP00000001696/1-215 ---------- ---------- ---------- --------