KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:09:11 2014 Check: 00 .. Name: ENSP00000283033/1-958 Len: 986 Check: 8258 Weight: 1.00 Name: ENSBTAP00000019741/1-957 Len: 986 Check: 1803 Weight: 1.00 Name: bmy_06504T0/1-681 Len: 986 Check: 1743 Weight: 1.00 Name: ENSTTRP00000016009/1-924 Len: 986 Check: 5386 Weight: 1.00 // 1 50 ENSP00000283033/1-958 MSECGGRGG- -GSSSSEDAE DEGGGGGGPA GSDCLSSSPT LATASSAGRL ENSBTAP00000019741/1-957 MSECGGRGGG GGSSSSSDDA EDEGGGGGPA GSGSLSPAP- --AASSEGRL bmy_06504T0/1-681 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016009/1-924 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000283033/1-958 RRGLRGAFLM ARQRPELLCG AVALGCALLL ALKFTCSRAK DVIIPAKPPV ENSBTAP00000019741/1-957 RRGLRGASLM ARRRPELLCG AVALGCALLL ALKFTCSRAK DVIIPAKPPV bmy_06504T0/1-681 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016009/1-924 ---------- --RRPKLLCG AVALGCALLL ALKFTCSRAK DVIIPAKPPV 101 150 ENSP00000283033/1-958 SFFSLRSPVL DLFQGQLDYA EYVRRDSEVV LLFFYAPWCG QSIAARAEIE ENSBTAP00000019741/1-957 SFFSSRSPVL DLFQGQLDYA EHIRRDSEVV LLFFYAPWCG QSIAARAEIE bmy_06504T0/1-681 ---------- --MRGRL--- ---------- ---------- ---------- ENSTTRP00000016009/1-924 SFFSSRSPVL DLFQGQLDYA EHIRQDSEVV LLFFYAPWCG QSIAARAEIE 151 200 ENSP00000283033/1-958 QAASRLSDQV LFVAINCWWN QGKCRKQKHF FYFPVIYLYH RSFGPIEYKG ENSBTAP00000019741/1-957 QAASRLSDQV LFVAINCWWN QGKCRKQKHF FYFPVIYLYH RSFGPIEYKG bmy_06504T0/1-681 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016009/1-924 QVASQLSDQV LFVAVNCWWN QGKCRKQKHF FYFPVIYLYH RSFGPIEYKG 201 250 ENSP00000283033/1-958 PMSAVYIEKF VRRVMKPLLY IPSQSELLDF LSNYEPGVLG YFEFSGSPQP ENSBTAP00000019741/1-957 PMSAVYIEKF VRRVMKPLLY IPSQSELLDF LSNYEPGVLG YFEFSGSPQP bmy_06504T0/1-681 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016009/1-924 PMSAVYIEKF VRRVMKPLLY IPSQSELLDF LSNYEPGVLG YFEFSGSPQP 251 300 ENSP00000283033/1-958 PGYLTFFTSA LHSLK----- ---------- ---------- -KDYLGTVRF ENSBTAP00000019741/1-957 PGYLTFFTSA LHSLK----- ---------- ---------- -KDYLGTVRF bmy_06504T0/1-681 ---------- ---------- ---------- ---------- -SDYLGTVRF ENSTTRP00000016009/1-924 PGYLTFFTSA LHSLKKALGS ASSPKALVSF IGEHLETQIW VQDYLGTVRF 301 350 ENSP00000283033/1-958 GVITNKHLAK LVSLVHSGSV YLHRHFNTSL VFPREVLNYT AENICKWALE ENSBTAP00000019741/1-957 GVITNKHLAK LVSLVHSGSV YLHRHFNTSL VFPREVINYT AENICKWALE bmy_06504T0/1-681 GVITNKHLAK ---------- ---------L VFPREVINYT AENIYKWALE ENSTTRP00000016009/1-924 GVITNKHLAK LVSLVHSGSV YLHRHFNTSL VFPREVINYT AENIYKWALE 351 400 ENSP00000283033/1-958 NQETLFRWLR PHGGKSLLLN NELKKGPALF LFIPFNPLAE SHPLIDEITE ENSBTAP00000019741/1-957 NRETLVRWLW PHGGKSLLLN NELKKGPALF VFIPFNPLAE SHPLIDEITE bmy_06504T0/1-681 NRETLLRWLR PHGGKSLLLN NELKKGPALF VFIPFNPLAE SHPLIDEITE ENSTTRP00000016009/1-924 NREMLLRWLR PHGGKSLLLN NELKKGPALF VFIPFNPLAE SHPLIDEITE 401 450 ENSP00000283033/1-958 VALEYNNCHG DQVVERLLQH LRRVDAPVLE SLALEVPAQL PDPPTITASP ENSBTAP00000019741/1-957 VALEYNNCHG DQVVERLLQH LRRVDAPAFK SLAPDPPARL PDPPLITASP bmy_06504T0/1-681 VALEYNNCHG DQVVERLLQH LRRVDAPVFK SLAPEPPAQL PDPPLITESP ENSTTRP00000016009/1-924 VALEYNNCHG DQVVERLLQH LRRVDAPVFK SLAPEPPAQL PDPPLITESP 451 500 ENSP00000283033/1-958 CCNTVVLPQW HSFSRTHNVC ELCVNQTSGG MKPSSVSVPQ CSFFEMAAAL ENSBTAP00000019741/1-957 CCNTVVLPRW HSISRTHNVC ELCVNQTAGG LRPSSVSMPQ CSFFEMAAAL bmy_06504T0/1-681 CCNTVVLPQW HSISRTHNVC ELCVNQTAGG LRPRSVSMPQ CSFFEMAAAL ENSTTRP00000016009/1-924 CCNTVVLPQW HSISRTHNVC ELCVNQTAGG LRPSSVGMPQ CSFFEMAAAL 501 550 ENSP00000283033/1-958 DSFYLKEQTF YHVASDSIEC SNFLTSYSPF SYYTACCRTI SRGVSGFIDS ENSBTAP00000019741/1-957 DSFYLKEQTF YHVVSDSIEC SNFLSFYSPF SYYTACCRTI NRGVAGFIDS bmy_06504T0/1-681 DSFYLKEQTF YHVASDSIEC RNFLSFYSPF SYYTACCRTI NRGVTGFIDS ENSTTRP00000016009/1-924 DSFYLKEQTF YHVASDSIEC RNFLSFYSPF SYYTACCRTI NRGVTGFIDS 551 600 ENSP00000283033/1-958 EQGVFEAPTV AFSSLEKKCE VDAPSSVPHI EENRYLFPEV DMTSTNFTGL ENSBTAP00000019741/1-957 EQGVFETPPV AFSSLEKKCE VESPGSVPHI EENRYLFPEL ETSSSSFTGL bmy_06504T0/1-681 EQDVFETPTI AFSSLEKKCE VDTPSSVPHI EENRYLFPEL DVDSTSFIGL ENSTTRP00000016009/1-924 EQDVFETPTI AFSSLEKKCE VDTPSSVPHI EENRYLFPEL DVDNASFIGL 601 650 ENSP00000283033/1-958 SCRTNKTLNI YLLDSNLFWL YAERLGAPSS TQVKEFAAIV DVKEESHYIL ENSBTAP00000019741/1-957 SCRTNKTLNI YLLDSNLFWL YAERLGAPSA ARVKEFATIV DVKEESHYIL bmy_06504T0/1-681 SCRTNKTLNI YLLDSNLFWL YAERLGAPSA ARVKGFAAIV DVKEESHYVL ENSTTRP00000016009/1-924 SCRTNKTLNI YLLDSNLFWL YAERLGAPST ARVKGFAAIV DVKEESHYVL 651 700 ENSP00000283033/1-958 DPKQALMKLT LESFIQNFSV LYSPLKRHLI GSGSAQFPSQ HLITEVTTDT ENSBTAP00000019741/1-957 DPKQALMKFT LESFIQNFSV LYSPLKRHLI GSDSTQFTSQ RLITEVTTDT bmy_06504T0/1-681 DPKQALMKFT LESFIQNFSV LYSPLKRHLI GSDSAQFPSQ HLITEVTTDT ENSTTRP00000016009/1-924 DPKQALMKFT LESFIQNFSV LYSPLKRHLX XXXXXXXXXX XXXXXXXXXX 701 750 ENSP00000283033/1-958 FWEVVLQKQD VLLLYYAPWC GFCPSLNHIF IQLARNLPMD TFTVARIDVS ENSBTAP00000019741/1-957 FWEVVLQKQD VLLLYYAQWC GFCPALNHVF IQLARLLPSD TFTVARIDVS bmy_06504T0/1-681 FWEVVLQKQD VLLLYYAQWC GFCPALNHVF IQLARLLPAD TFTVARIDVS ENSTTRP00000016009/1-924 XXXXXXXXXD VLLLYYAQWC GFCPALNHIF IQLARLLPAD TFTVARIDVS 751 800 ENSP00000283033/1-958 QNDLPWEFMV DRLPTVLFFP CNRKDLSVKY PEDVPITLPN LLRFILHHSD ENSBTAP00000019741/1-957 QNDLPWEFMV DRLPTVLFFP CNRKDLSVKY PEDLPITLPN LLRFILHHSD bmy_06504T0/1-681 QNDLPWEFMV DRLPTVLFFP CNRKDLSVKY PEDLPITLPN LLRFILHHSD ENSTTRP00000016009/1-924 QNDLPWEFMV DRLPTVLFFP CNRKDLSVKY PEDLPITLPN LLRFILHHSD 801 850 ENSP00000283033/1-958 PASSPQNVAN SPTKECLQSE AVLQRGHISH LEREIQKLRA EISSLQRAQV ENSBTAP00000019741/1-957 PASDPRNLAG PPTAECLQNE AVLQQGHIAH LEREIRKLRA EIGTLQRAQV bmy_06504T0/1-681 PASAPQNLVN PPTKECLQRE AVLQQGHISH LEREIQKLRA EISALQQAQG ENSTTRP00000016009/1-924 PASAPQNLVN PPTKECLQRE AVLQQGHISH LEREIQKLRA EISALQQAQG 851 900 ENSP00000283033/1-958 QVESQLSSAR RDEHRLRQQQ RALEEQHSLL HAHSEQLQAL YEQKTRELQE ENSBTAP00000019741/1-957 QVEARLASAR RDEHRLLRQQ HTLERQHDLL RLHSEQLQAL YEHKTRELDE bmy_06504T0/1-681 QVEARLSSTH RDEQQLRRRQ HTLERQHSLL QRHSEQLQAL HEQKSRQLEE ENSTTRP00000016009/1-924 QVEARLSSAR RDEQQLRRQQ HTLERQHSLL QLHSEQLQAL YEQKTRELEE 901 950 ENSP00000283033/1-958 LARKLQELAD ASENLLTENT WLKILVATME RKLEGRDGAE SLAAQREVHP ENSBTAP00000019741/1-957 VARKLQELAD ASETLLTENT WLKILVATME QKLEGRDGAD DRVPPSKARS bmy_06504T0/1-681 VARQLQELAD ASENLLTENT WLKILVATME QKLEGRDGAE GRAPPDDARS ENSTTRP00000016009/1-924 VARKLQELAD ASENLLTENT WLKILVATME QKLEGRDGAE DRAPLDEVRL 951 1000 ENSP00000283033/1-958 KQPEPSATPQ LPGSSPPPAN VSATLVSERN KENRTD ENSBTAP00000019741/1-957 EHPEPPGAPR LPASTPLPAN ISSTLASEGS PENRTD bmy_06504T0/1-681 DYRKPSGAPR LPASTPPPSN VSSTLASERS TENRTD ENSTTRP00000016009/1-924 DYHKPSGTPR LPASTPPPSN VSSTLASERS TENRTD