KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:17 2014 Check: 00 .. Name: BACU010143/1-264 Len: 373 Check: 664 Weight: 1.00 Name: ENSP00000281187/1-336 Len: 373 Check: 8043 Weight: 1.00 Name: ENSBTAP00000019761/1-336 Len: 373 Check: 7864 Weight: 1.00 Name: bmy_12582T0/1-372 Len: 373 Check: 5582 Weight: 1.00 Name: ENSTTRP00000002205/1-285 Len: 373 Check: 733 Weight: 1.00 // 1 50 BACU010143/1-264 ---------- ---------- ---------- ------MP-- ---------- ENSP00000281187/1-336 ---------- ---------- ---------- ------MSFF GFGQSVEVEI ENSBTAP00000019761/1-336 ---------- ---------- ---------- ------LSFT GLGQSVDVDI bmy_12582T0/1-372 RTCSALPPEP RRPGERGRRR RVQPSGLPRP GRPGGDMSFF GFGQSVDVDI ENSTTRP00000002205/1-285 ---------- ---------- ---------- ------MSFF GFGQSVDVDI 51 100 BACU010143/1-264 ---------- ---------- ------HSGP ALARKSSCLG L--------- ENSP00000281187/1-336 LLNDAESRKR AEHKTEDGKK EKYFLFYDGE TVSGKVS-LA LKNPNKRLEH ENSBTAP00000019761/1-336 LLNDADSRRR AEHKTEDGKK DKYFLFYDGE TVSGKVS-LA LKNPNKRLEH bmy_12582T0/1-372 LLNDADSRKR AEHKTEDGKK DKYFLFYDGE TVSGKVS-LA LKNPNKRLEH ENSTTRP00000002205/1-285 LLNDADSRKR AEHKTEDGKK DKYFLFYDGE TVSGKVS-LA LKNPNKRLEH 101 150 BACU010143/1-264 --------GL GELYYDRGNH HEFVSLVKDL ARPGEVTQSQ AFDFEFTHVE ENSP00000281187/1-336 QGIKIEFIGQ IELYYDRGNH HEFVSLVKDL ARPGEITQSQ AFDFEFTHVE ENSBTAP00000019761/1-336 QGIKVEFIGQ IELYYDRGNH HEFVSLVKDL ARPGEVTQSQ AFDFEFTHVE bmy_12582T0/1-372 QGIKVEFIGQ IELYYDRGNH HEFVSLVKDL ARPGEVTQSQ AFDFEFTHVE ENSTTRP00000002205/1-285 QGIKVEFIGQ IELYYDRGNH HEFVSLVKDL ARPGEVTQSQ AFDFEFTHVE 151 200 BACU010143/1-264 KPYESYTGQN VKLRYFLRAT ISRRLNDVVK EMDIVVHTLS TYPELNSSIK ENSP00000281187/1-336 KPYESYTGQN VKLRYFLRAT ISRRLNDVVK EMDIVVHTLS TYPELNSSIK ENSBTAP00000019761/1-336 KPYESYTGQN VKLRYFLRAT ISRRLNDVVK EMDIVVHTLS TYPELNSSIK bmy_12582T0/1-372 KPYESYTGQN VKLRYFLRAT ISRRLNDVVK EMDIVVHTLS TYPELNSSIK ENSTTRP00000002205/1-285 KPYESYTGQN VKLRYFLRAT ISRRLND-VK EMDIVVHTLS TYPELNSSIK 201 250 BACU010143/1-264 MEVGIEDCLH IEFEYNKSKY HLKDVIVGKI YFLLVRIKIK HMEIDIIKRE ENSP00000281187/1-336 MEVGIEDCLH IEFEYNKSKY HLKDVIVGKI YFLLVRIKIK HMEIDIIKRE ENSBTAP00000019761/1-336 MEVGIEDCLH IEFEYNKSKY HLKDVIVGKI YFLLVRIKIK HMEIDIIKRE bmy_12582T0/1-372 MEVGIEDCLH IEFEYNKSKY HLKDVIVGKI YFLLVRIKIK HMEIDIIKRE ENSTTRP00000002205/1-285 MEVGIEDCLH IEFEYNKSKY HLKDVIVGKI YFLLVRIKIK HMEIDIIKRE 251 300 BACU010143/1-264 TTGTGPNVYH ENDTIAKYEI MDGAPVRGES IPIRLFLAGY ELTPTMRDIN ENSP00000281187/1-336 TTGTGPNVYH ENDTIAKYEI MDGAPVRGES IPIRLFLAGY ELTPTMRDIN ENSBTAP00000019761/1-336 TTGTGPNVYH ENDTIAKYEI MDGAPVRGES IPIRLFLAGY ELTPTMRDIN bmy_12582T0/1-372 TTGTGPNVYH ENDTIAKYEI MDGAPVRGES IPIRLFLAGY ELTPTMRDIN ENSTTRP00000002205/1-285 TTGTGPNVYH ENDTIAKYEI MDGAPVRGES IPIRLFLAGY ELTPTMRDIN 301 350 BACU010143/1-264 KKFSVRYYLN LVLIDEEERR YFKQ------ ---------- --QAAIASQR ENSP00000281187/1-336 KKFSVRYYLN LVLIDEEERR YFKQQEVVLW RKGDIVRKSM SHQAAIASQR ENSBTAP00000019761/1-336 KKFSVRYYLN LVLIDDEERR YFKQQEVVLW RKGDIVRKSM SHQAAIASQR bmy_12582T0/1-372 KKFSVRYYLN LVLIDEEERR YFKQQEVVLW RKGDIVRKSM SHQAAIASQR ENSTTRP00000002205/1-285 KKFSVRYYLN LVLIDEEERR YFK------- ---------- ---------- 351 400 BACU010143/1-264 FEGTAPLGEA RTPGQLSDGS SRQ ENSP00000281187/1-336 FEGTTSLGEV RTPSQLSDNN CRQ ENSBTAP00000019761/1-336 FEGTTPLGEA RTPGPLSDSG NRQ bmy_12582T0/1-372 FEGTAPLGEA RTPGQLSDGS SRQ ENSTTRP00000002205/1-285 ---------- ---------- ---