KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:18 2014 Check: 00 .. Name: ENSP00000329419/1-906 Len: 906 Check: 3916 Weight: 1.00 Name: ENSBTAP00000019767/1-713 Len: 906 Check: 5841 Weight: 1.00 Name: ENSTTRP00000005066/1-906 Len: 906 Check: 3744 Weight: 1.00 Name: BACU012748/1-906 Len: 906 Check: 3792 Weight: 1.00 Name: bmy_19994T0/1-877 Len: 906 Check: 9325 Weight: 1.00 // 1 50 ENSP00000329419/1-906 MPLRLDIKRK LTARSDRVKS VDLHPTEPWM LASLYNGSVC VWNHETQTLV ENSBTAP00000019767/1-713 ---------- ---------- ---------M LASLYNGSVC VWNHETQTLV ENSTTRP00000005066/1-906 MPLRLDIKRK LTARSDRVKS VDLHPTEPWM LASLYNGSVC VWNHETQTLV BACU012748/1-906 MPLRLDIKRK LTARSDRVKS VDLHPTEPWM LASLYNGSVC VWNHETQTLV bmy_19994T0/1-877 ---------- ---------- ---------M LASLYNGSVC VWNHETQTLV 51 100 ENSP00000329419/1-906 KTFEVCDLPV RAAKFVARKN WVVTGADDMQ IRVFNYNTLE RVHMFEAHSD ENSBTAP00000019767/1-713 KTFEVCDLPV RAAKFVARKN WVVTGADDMQ IRVFNYNTLE RVHMFEAHSD ENSTTRP00000005066/1-906 KTFEVCDLPV RAAKFVARKN WAVTGADDMQ IRVFNYNTLE RVHMFEAHSD BACU012748/1-906 KTFEVCDLPV RAAKFVARKN WAVTGADDMQ IRVFNYNTLE RVHMFEAHSD bmy_19994T0/1-877 KTFEVCDLPV RAAKFVARKN WAVTGADDMQ IRVFNYNTLE RVHMFEAHSD 101 150 ENSP00000329419/1-906 YIRCIAVHPT QPFILTSSDD MLIKLWDWDK KWSCSQVFEG HTHYVMQIVI ENSBTAP00000019767/1-713 YIRCIAVHPT QPFILTSSDD MLIKLWDWDK KWSCSQVFEG HTHYVMQIVI ENSTTRP00000005066/1-906 YIRCIAVHPT QPFILTSSDD MLIKLWDWDK KWSCSQVFEG HTHYVMQIVI BACU012748/1-906 YIRCIAVHPT QPFILTSSDD MLIKLWDWDK KWSCSQVFEG HTHYVMQIVI bmy_19994T0/1-877 YIRCIAVHPT QPFILTSSDD MLIKLWDWDK KWSCSQVFEG HTHYVMQIVI 151 200 ENSP00000329419/1-906 NPKDNNQFAS ASLDRTIKVW QLGSSSPNFT LEGHEKGVNC IDYYSGGDKP ENSBTAP00000019767/1-713 NPKDNNQFAS ASLDRTIKVW QLGSSSPNFT LEGHEKGVNC IDYYSGGDKP ENSTTRP00000005066/1-906 NPKDNNQFAS ASLDRTIKVW QLGSSSPNFT LEGHEKGVNC IDYYSGGDKP BACU012748/1-906 NPKDNNQFAS ASLDRTIKVW QLGSSSPNFT LEGHEKGVNC IDYYSGGDKP bmy_19994T0/1-877 NPKDNNQFAS ASLDRTIKVW QLGSSSPNFT LEGHEKGVNC IDYYSGGDKP 201 250 ENSP00000329419/1-906 YLISGADDRL VKIWDYQNKT CVQTLEGHAQ NVSCASFHPE LPIIITGSED ENSBTAP00000019767/1-713 YLISGADDRL VKIWDYQNKT CVQTLEGHAQ NVSCASFHPE LPIIITGSED ENSTTRP00000005066/1-906 YLISGADDRL VKIWDYQNKT CVQTLEGHAQ NVSCASFHPE LPIIITGSED BACU012748/1-906 YLISGADDRL VKIWDYQNKT CVQTLEGHAQ NVSCASFHPE LPIIITGSED bmy_19994T0/1-877 YLISGADDRL VKIWDYQNKT CVQTLEGHAQ NVSCASFHPE LPIIITGSED 251 300 ENSP00000329419/1-906 GTVRIWHSST YRLESTLNYG MERVWCVASL RGSNNVALGY DEGSIIVKLG ENSBTAP00000019767/1-713 GTVRIWHSST YRLESTLNYG MERVWCVASL RGSNNVALGY DEGSIIVKLG ENSTTRP00000005066/1-906 GTVRIWHSST YRLESTLNYG MERVWCVASL RGSNNVALGY DEGSIIVKLG BACU012748/1-906 GTVRIWHSST YRLESTLNYG MERVWCVASL RGSNNVALGY DEGSIIVKLG bmy_19994T0/1-877 GTVRIWHSST YRLESTLNYG MERVWCVASL RGSNNVALGY DEGSIIVKLG 301 350 ENSP00000329419/1-906 REEPAMSMDA NGKIIWAKHS EVQQANLKAM GDAEIKDGER LPLAVKDMGS ENSBTAP00000019767/1-713 REEPAMSMDA NGKIIWAKHS EVQQANLKAM GDAEIKDGER LPLAVKDMGS ENSTTRP00000005066/1-906 REEPAMSMDA NGKIIWAKHS EVQQANLKAM GDAEIKDGER LPLAVKDMGS BACU012748/1-906 REEPAMSMDA NGKIIWAKHS EVQQANLKAM GDAEIKDGER LPLAVKDMGS bmy_19994T0/1-877 REEPAMSMDA NGKIIWAKHS EVQQANLKAM GDAEIKDGER LPLAVKDMGS 351 400 ENSP00000329419/1-906 CEIYPQTIQH NPNGRFVVVC GDGEYIIYTA MALRNKSFGS AQEFAWAHDS ENSBTAP00000019767/1-713 CEIYPQTIQH NPNGRFVVVC GDGEYIIYTA MALRNKSFGS AQEFAWAHDS ENSTTRP00000005066/1-906 CEIYPQTIQH NPNGRFVVVC GDGEYIIYTA MALRNKSFGS AQEFAWAHDS BACU012748/1-906 CEIYPQTIQH NPNGRFVVVC GDGEYIIYTA MALRNKSFGS AQEFAWAHDS bmy_19994T0/1-877 CEIYPQTIQH NPNGRFVVVC GDGEYIIYTA MALRNKSFGS AQEFAWAHDS 401 450 ENSP00000329419/1-906 SEYAIRESNS IVKIFKNFKE KKSFKPDFGA ESIYGGFLLG VRSVNGLAFY ENSBTAP00000019767/1-713 SEYAIRESNS VVKIFKNFKE KKSFKPDFGA ESIYGGFLLG VRSVNGLAFY ENSTTRP00000005066/1-906 SEYAIRESNS VVKIFKNFKE KKSFKPDFGA ESIYGGFLLG VRSVNGLAFY BACU012748/1-906 SEYAIRESNS VVKIFKNFKE KKSFKPDFGA ESIYGGFLLG VRSVNGLAFY bmy_19994T0/1-877 SEYAIRESNS VVKIFKNFKE KKSFKPDFGA ESIYGGFLLG VRSVNGLAFY 451 500 ENSP00000329419/1-906 DWDNTELIRR IEIQPKHIFW SDSGELVCIA TEESFFILKY LSEKVLAAQE ENSBTAP00000019767/1-713 DWENTELIRR IEIQPKHIFW SDSGELVCIA TEESFFILKY LSEKVLAAQE ENSTTRP00000005066/1-906 DWDNTELIRR IEIQPKHIFW SDSGELVCIA TEESFFILKY LSEKVLAAQE BACU012748/1-906 DWDNTELIRR IEIQPKHIFW SDSGELVCIA TEESFFILKY LSEKVLAAQE bmy_19994T0/1-877 DWDNTELIRR IEIQPKHIFW SDSGELVCIA TEESFFILKY LSEKVLAAQE 501 550 ENSP00000329419/1-906 THEGVTEDGI EDAFEVLGEI QEIVKTGLWV GDCFIYTSSV NRLNYYVGGE ENSBTAP00000019767/1-713 THEGVTEDGI EDGFEVLGEI QEIVKTGLWV GDCFIYTSSV NRLNYYVGGE ENSTTRP00000005066/1-906 THEGVTEDGI EDGFEVLGEI QEIVKTGLWV GDCFIYTSSV NRLNYYVGGE BACU012748/1-906 THEGVTEDGV EDGFEVLGEI QEIVKTGLWV GDCFIYTSSV NRLNYYVGGE bmy_19994T0/1-877 THEGVTEDGV EDGFEVLGEI QEIVKTGLWV GDCFIYTSSV NRLNYYVGGE 551 600 ENSP00000329419/1-906 IVTIAHLDRT MYLLGYIPKD NRLYLGDKEL NIISYSLLVS VLEYQTAVMR ENSBTAP00000019767/1-713 IVTIAHLDRT MYLLGYIPKD NRLYLGDKEL NIVSYSLLVS VLEYQTAVMR ENSTTRP00000005066/1-906 IVTIAHLDRT MYLLGYIPKD NRLYLGDKEL NIVSYSLLVS VLEYQTAVMR BACU012748/1-906 IVTIAHLDRT MYLLGYIPKD NRLYLGDKEL NIVSYSLLVS VLEYQTAVMR bmy_19994T0/1-877 IVTIAHLDRT MYLLGYIPKD NRLYLGDKEL NIVSYSLLVS VLEYQTAVMR 601 650 ENSP00000329419/1-906 RDFSMADKVL PTIPKEQRTR VAHFLEKQGF KQQALTVSTD PEHRFELALQ ENSBTAP00000019767/1-713 RDFSMADKVL PTIPKEQRTR VAHFLEKQGF KQQALTVSTD PEHRFELALQ ENSTTRP00000005066/1-906 RDFSMADKVL PTIPKEQRTR VAHFLEKQGF KQQALTVSTD PEHRFELALQ BACU012748/1-906 RDFSMADKVL PTIPKEQRTR VAHFLEKQGF KQQALTVSTD PEHRFELALQ bmy_19994T0/1-877 RDFSMADKVL PTIPKEQRTR VAHFLEKQGF KQQALTVSTD PEHRFELALQ 651 700 ENSP00000329419/1-906 LGELKIAYQL AVEAESEQKW KQLAELAISK CQFGLAQECL HHAQDYGGLL ENSBTAP00000019767/1-713 LGELKIAYQL AVEAESEQKW KQLAELAISK CQFGLAQECL HHAQDYGGLL ENSTTRP00000005066/1-906 LGELKIAYQL AVEAESEQKW KQLAELAISK CQFGLAQECL HHAQDYGGLL BACU012748/1-906 LGELKIAYQL AVEAESEQKW KQLAELAISK CQFGLAQECL HHAQDYGGLL bmy_19994T0/1-877 LGELKIAYQL AVEAESEQKW KQLAELAISK CQFGLAQECL HHAQDYGGLL 701 750 ENSP00000329419/1-906 LLATASGNAN MVNKLAEGAE RDGKNNVAFM SYFLQGKVDA CLELLIRTGR ENSBTAP00000019767/1-713 LLATASGNAS MVNKLAEGAE RDGKNNVAFM SYFLQGNLSK CL-------- ENSTTRP00000005066/1-906 LLATASGNAT MVNKLAEGAE RDGKNNVAFM SYFLQGKLDA CLELLIRTGR BACU012748/1-906 LLATASGNAT MVNKLAEGAE RDGKNNVAFM SYFLQGKLEA CLELLIRTGR bmy_19994T0/1-877 LLATASGNAT MVNKLAEGAE RDGKNNVAFM SYFLQGKLDA CLELLIRTGR 751 800 ENSP00000329419/1-906 LPEAAFLART YLPSQVSRVV KLWRENLSKV NQKAAESLAD PTEYENLFPG ENSBTAP00000019767/1-713 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005066/1-906 LPEAAFLART YLPSQVSRVV KLWRENLSKV NQKAAESLAD PTEYENLFPG BACU012748/1-906 LPEAAFLART YLPSQVSRVV KLWRENLSKV NQKAAESLAD PTEYENLFPG bmy_19994T0/1-877 LPEAAFLART YLPSQVSRVV KLWRENLSKV NQKAAESLAD PTEYENLFPG 801 850 ENSP00000329419/1-906 LKEAFVVEEW VKETHADLWP AKQYPLVTPN EERNVMEEGK DFQPSRSTAQ ENSBTAP00000019767/1-713 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005066/1-906 LKEAFVVEEW VKETHADLWP AKQYPLVTPN EERNVMEEAK GFQPSRSASQ BACU012748/1-906 LKEAFVVEEW VKETHADLWP AKQYPLVTPN EERNVMEEAK GLQPSRAASQ bmy_19994T0/1-877 LKEAFVVEEW VKETHADLWP AKQYPLVTPN EERNVMEEAK GLQPSRSASQ 851 900 ENSP00000329419/1-906 QELDGKPASP TPVIVASHTA NKEEKSLLEL EVDLDNLELE DIDTTDINLD ENSBTAP00000019767/1-713 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005066/1-906 QELDGKPASP TPVIVAPHTD NKEEKSLLEL EVDLDNLELE DIDTTDINLD BACU012748/1-906 QELDGKPASP TPVIVAPATD NKEEKSLLEL EVDLDNLELE DIDTTDINLD bmy_19994T0/1-877 QELDGKPASP TPVIVVPPTD NKEEKSLLEL EVDLDNLELE DIDTTDINLD 901 950 ENSP00000329419/1-906 EDILDD ENSBTAP00000019767/1-713 ------ ENSTTRP00000005066/1-906 EDILDD BACU012748/1-906 EDILDD bmy_19994T0/1-877 EDILDD