KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:19 2014 Check: 00 .. Name: ENSP00000263182/1-387 Len: 470 Check: 5276 Weight: 1.00 Name: bmy_06782T0/1-204 Len: 470 Check: 7706 Weight: 1.00 Name: ENSBTAP00000019771/1-387 Len: 470 Check: 2234 Weight: 1.00 Name: BACU008854/1-387 Len: 470 Check: 4072 Weight: 1.00 Name: ENSTTRP00000002754/1-387 Len: 470 Check: 4631 Weight: 1.00 // 1 50 ENSP00000263182/1-387 ---------- ---------- ---------- ---------- ---------- bmy_06782T0/1-204 MLPLESPGSN GFPPLETPPT FKSASEILLS LIKSCHLDNT KEGFQLPSGV ENSBTAP00000019771/1-387 ---------- ---------- ---------- ---------- ---------- BACU008854/1-387 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002754/1-387 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000263182/1-387 ---MACTI-- ---------- ---------- --------QK AEALDGAHLM bmy_06782T0/1-204 ATPSDCDILP HLQTSAVSGG RAAVELPGAG RLPSQSTTSD AEALDGAHLM ENSBTAP00000019771/1-387 ---MGCVI-- ---------- ---------- --------QK AEVLDGAHLM BACU008854/1-387 ---MHCAI-- ---------- ---------- --------QK AEALDGAHLM ENSTTRP00000002754/1-387 ---MHCAI-- ---------- ---------- --------QK AEALDGAHLM 101 150 ENSP00000263182/1-387 QILWYDEEES LYPAVWLRDN CPCSDCYLDS AKARKLLVEA LDVNIGIKGL bmy_06782T0/1-204 RILWQDGAES VYPAVWLRDN CQCPDCYLDS AKARKLLIEA LDVNIGIKGL ENSBTAP00000019771/1-387 RIIWQDGTDS IYPAVWLRDN CQCPDCYLDS AKARKLLIEA LDVYVGIKDL BACU008854/1-387 RILWQDGAES VYPAVWLRDN CQCPDCYLDS AKARKLLIEA LDVNIGIKDL ENSTTRP00000002754/1-387 RILWQDGVES VYPAVWLRDN CQCPDCYLDS AKARKLLIEA LDVNIGIKGL 151 200 ENSP00000263182/1-387 IFDRKKVYIT WPDEHYSEFQ ADWLKKRCFS KQARAKLQRE LFFPECQYWG bmy_06782T0/1-204 TFDRKKVHIT WPNDHYSEYE ADWLKKRCFS QQAREKLQRE LFLP------ ENSBTAP00000019771/1-387 MFDRKKVHIM WPNDHCSEYG ADWLKKRCFS QQAREKLQKE LFLPECQYWG BACU008854/1-387 TFDRKKVHIT WPNDHYSEYE ADWLKKRCFS QQAREKLQRE LFLPECQYWG ENSTTRP00000002754/1-387 TFDRKKVHIT WPNDHYSEYE ADWLKKRCFS QQAREKLQRE LFLPECQYWG 201 250 ENSP00000263182/1-387 SELQLPTLDF EDVLRYDEHA YKWLSTLKKV GIVRLTGASD KPGEVSKLGK bmy_06782T0/1-204 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019771/1-387 SEFQLPTLDF EDVLKDDEHA YRWLSSLKKV GIVRLTGAAD KRGEVLKLGK BACU008854/1-387 SEFQLPTLDF EAVLKDDEHA YRWLSRLKKV GIVRLTGASD KRGEVLKLGK ENSTTRP00000002754/1-387 SEFQLPTLDF EDVLKDDEHA YRWLSRLKKV GIVRLTGASD KRGEVLKLGK 251 300 ENSP00000263182/1-387 RMGFLYLTFY GHTWQVQDKI DANNVAYTTG KLSFHTDYPA LHHPPGVQLL bmy_06782T0/1-204 ---------- ---------- ---------G NLA------- ---------- ENSBTAP00000019771/1-387 RIGFLYLTFY GHTWQVQDKI DANNVAYTTG KLSFHTDYPA LHHPPGVQLL BACU008854/1-387 RIGFLYLTFY GHTWQVQDKI DANNVAYTTG KLSFHTDYPA LHHPPGVQLL ENSTTRP00000002754/1-387 RIGFLYLTFY GHTWQVQDKI DANNVAYTTG KLSFHTDYPA LHHPPGVQLL 301 350 ENSP00000263182/1-387 HCIKQTVTGG DSEIVDGFNV CQKLKKNNPQ AFQILSSTFV DFTDIGVDYC bmy_06782T0/1-204 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019771/1-387 HCIKQTVTGG ESEIVDGFNV CQKLKEKNPR AFQILSSTFV DFTDIGVDYC BACU008854/1-387 HCIKQTVTGG DSEIVDGFNV CQKLKEKNPW AFQILSSTFV DFTDIGVDYC ENSTTRP00000002754/1-387 HCIKQTVTGG DSEIVDGFNV CQKLKEKNPW AFQILSSTFV DFTDIGVDYC 351 400 ENSP00000263182/1-387 DFSVQSKHKI IELDDKGQVV RINFNNATRD TIFDVPVERV QPFYAALKEF bmy_06782T0/1-204 ---------- ---------- -VNFN----- ---------- ---------- ENSBTAP00000019771/1-387 DFSVQSKHKI IELDDKDQVV RINFNNATRD TIFDVPVERV QPFYAALKEF BACU008854/1-387 DFSVQSKHKI IELDDKGQVV RINFNNATRD TIFDIPVERV QPFYAALKEF ENSTTRP00000002754/1-387 DFSVQSKHKI IELDDKGQVV RINFNNATRD TIFDVPVERI QPFYAALKEF 401 450 ENSP00000263182/1-387 VDLMNSKESK FTFKMNPGDV ITFDNWRLLH GRRSYEAGTE ISRHLEGAYA bmy_06782T0/1-204 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019771/1-387 VDLMNCKDFK FTFKMNPGDV ITFDNWRLLH GRRSYEAGTE ITRHLEGAYA BACU008854/1-387 VDLMNCKEFK FTFKMNPGDV ITFDNWRLLH GRRSYEAGTE ISRHLEGAYA ENSTTRP00000002754/1-387 VDLMNCKEFK FTFKMNPGDV ITFDNWRLLH GRRSYEAGTE ISRHLEGAYA 451 500 ENSP00000263182/1-387 DWDVVMSRLR ILRQRVENGN bmy_06782T0/1-204 ---------- VL-------- ENSBTAP00000019771/1-387 DWDVVMSRLR ILRQSLQNRN BACU008854/1-387 DWDVVMSRLR ILRQSVRNRN ENSTTRP00000002754/1-387 DWDVVMSRLR ILRQSVRNRN