KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:20 2014 Check: 00 .. Name: ENSTTRP00000015811/1-520 Len: 975 Check: 4509 Weight: 1.00 Name: ENSP00000354645/1-525 Len: 975 Check: 7797 Weight: 1.00 Name: ENSBTAP00000019773/1-517 Len: 975 Check: 3440 Weight: 1.00 Name: bmy_02007T0/1-967 Len: 975 Check: 7076 Weight: 1.00 Name: BACU003234/1-524 Len: 975 Check: 4470 Weight: 1.00 // 1 50 ENSTTRP00000015811/1-520 MAASSAAAEE AAVYLIVSGI PSELRSAQLR SYFSQFREQC GCGFLCFHYR ENSP00000354645/1-525 MAVPGEAEEE ATVYLVVSGI PSVLRSAHLR SYFSQFREER GGGFLCFHYR ENSBTAP00000019773/1-517 MAVSSEAEEE AVVYLVVSGI PSELRSAQLR NYFSQFREQR DCGFLCFHYR bmy_02007T0/1-967 -MAASSAAEE AAVYLIVSGI PAELRSAQLR SYFSQFREQR GCGFLCFHYR BACU003234/1-524 -MAASSAAEE AAVYLIVSGI PAELRSAQLR SYFSQFREQR DCGFLCFHYR 51 100 ENSTTRP00000015811/1-520 HRPERAPPQA APDSTLTPIR QG-----LAQ TSLNDARTLS TQDSAPAQTR ENSP00000354645/1-525 HRPERAPPQA APNSALIPTD PAAEGQLLSQ TSATDVRPLS TRDSTPIQTR ENSBTAP00000019773/1-517 HRPERAPPQA APDCTPTPIR QG-----LAQ TSLNDAGALS TQDSNPTRTR bmy_02007T0/1-967 HRPERAPPQA APDSTLTPIR QG-----LAQ TSLNDARTLS TQDSAPAQTR BACU003234/1-524 HRPERAPPQA ATDSILTPIR QG-----LGQ TSLNDARTLS TQDSAPAQTR 101 150 ENSTTRP00000015811/1-520 TCCCVISVRG PTQAQRFLRM YSGRRWLDSQ GTCLPGRCFI RRLRLPTEAS ENSP00000354645/1-525 TCCCVISVRG LAQAQRLIRM YSGRRWLDSH GTWLPGRCLI RRLRLPTEAS ENSBTAP00000019773/1-517 TCCCVVSVRG AAQAQRFLRM YSGRRWLDSQ GTWLPGRCFI RRLRLPTEAS bmy_02007T0/1-967 TCCCVISVRG PXQAQRFLRM YSGRRWLDSQ GTWLPGRCFI RRLRLPTEAS BACU003234/1-524 TCCCVISVRG PTQAQRFLRM YSGRRWLDSQ GTWLPGRCLI RRLRLPTEAS 151 200 ENSTTRP00000015811/1-520 GLDSFPFKTR KELQSRKAES EAFTLADLRQ LPEL-PPVLM PNGNVGTPLR ENSP00000354645/1-525 GLGSFPFKTR KELQSWKAEN EAFTLADLKQ LPELNPPVLM PRGNVGTPLR ENSBTAP00000019773/1-517 GLGSFPFKTR KELQSRQAKS ETFTLADLRQ LPELNPPVLM PNGNVGTPLR bmy_02007T0/1-967 GLDSFPFKTR KELQSRKAES EAFTLADLRQ LPELNPPVLM PSGNVGTPLR BACU003234/1-524 GLDSFPFKTR KELQSRKAES EAFTLADLRQ LPELNPPVLM PSGNVGTPLR 201 250 ENSTTRP00000015811/1-520 VFLELIRACR LPPRIITQLH LQFPKTGSSR RYGNVPFKYE DSXXXXXXXX ENSP00000354645/1-525 VFLELIRACR LPPRIITQLQ LQFPKTGSSR RYGNVPFEYE DSETVEQEEL ENSBTAP00000019773/1-517 VFLELIRACR LPPRIITQLQ LQFPKTGSSR RYGNVPFTYE DSETVEQEEF bmy_02007T0/1-967 VFLELIRACR LPPRIITQLQ LQFPKTGSSR RYGNVPFKYD DSETVEQEEL BACU003234/1-524 VFLELIRACR LPPRIITQLQ LQFPKTGSSR RYGNVPFKYE DSETVEQEEL 251 300 ENSTTRP00000015811/1-520 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXDDERGEEW ENSP00000354645/1-525 VYTAEGEEIP QGTYLADIPA SPCGEPEEEV GKEEEEESHS DEDDDRGEEW ENSBTAP00000019773/1-517 VYTAEGEEIP QGSCLADIPS NSREEPEEE- -EEEEEESHS DDDDDRGEEW bmy_02007T0/1-967 VYTAEGEEIP QGTCLADVPA NPCGEPEEE- -EEEEEESHS DDDDDRGEEW BACU003234/1-524 VYTAEGEEIP QGTCLADVPA NPCGEPEEE- -EEEEEESHS DDDDDRGEEW 301 350 ENSTTRP00000015811/1-520 ERHEALHEDV TGQERTTEQL FEEEIELKWE KGGSGLVFYT DAQFWQEEEG ENSP00000354645/1-525 ERHEALHEDV TGQERTTEQL FEEEIELKWE KGGSGLVFYT DAQFWQEEEG ENSBTAP00000019773/1-517 ERHVALHEDV TGQERTSERL FEEEIELKWE KGGSGLVFYT DAQFWQEEEG bmy_02007T0/1-967 ERHEALHEDV TGQERTTERL FEEEIELKWE KGGSGLVFYT DAQFWQEEEG BACU003234/1-524 ERHEALHEDV TRQERTTERL FEEEIELKWE KGGSGLVFYT DAQFWQEEEG 351 400 ENSTTRP00000015811/1-520 DFDEQTADDW DVDMSVYYDA DGGDKDARDS VQIRLEQRLR DGQEAGSVIG ENSP00000354645/1-525 DFDEQTADDW DVDMSVYYDR DGGDKDARDS VQMRLEQRLR DGQEDGSVIE ENSBTAP00000019773/1-517 DFDEQTADDW DVDMSVYYDT DGGDKDARDS VQMRLERRLR DGQEAGSVIR bmy_02007T0/1-967 DFDEQTADDW DVDMSVYYDA DGGDKDARDS VQIRLERRLR DGQEAGSVIG BACU003234/1-524 DFDEQTADAW DVDMSVYYDA DGGDKDARDS VRIRLERRLR DGQEAGSVIG 401 450 ENSTTRP00000015811/1-520 HQVGTFERHT KGIGRKVMER QGWAEGQGLG SGCSGVPEAL DSDGQHPRCK ENSP00000354645/1-525 RQVGTFERHT KGIGRKVMER QGWAEGQGLG CRCSGVPEAL DSDGQHPRCK ENSBTAP00000019773/1-517 HQVGTFERHT KGIGRKVLER QGWAEGQGLG SQCSGVPDAL DNDGQHPRCK bmy_02007T0/1-967 YQMGTFERHT KGIGRKVMER QGWAEGQGLG SGCSGVPEAL DSDGQHPRCK BACU003234/1-524 HQMGTFERHT KGIGRKVMER QGWAEGQGLG SGCSGVPEAL DSDGQHPRCK 451 500 ENSTTRP00000015811/1-520 RGLGYHGEKL QPFVQPKRPR GTGLGLISTI YDEPLPQDQG DSLLRRQPPT ENSP00000354645/1-525 RGLGYHGEKL QPFGQLKRPR RNGLGLISTI YDEPLPQDQT ESLLRRQPPT ENSBTAP00000019773/1-517 RGLGYHGEKL QPFGQPKRPR GTGLGLISTI YDEPLPQDQG ELLLRRQPPT bmy_02007T0/1-967 RGLGYHGEKL QPFGQPKRPR GTGLGLISTI YDEPLPQDQG ESLLRRQPPT BACU003234/1-524 RGLGYHGEKL QPFGQPKRPR GTGLGLISTI YDEPLPQDQG ESLLRRQPPT 501 550 ENSTTRP00000015811/1-520 SMKFRTDMAF VRGSSCASDS PSEREW---- ---------- ---------- ENSP00000354645/1-525 SMKFRTDMAF VRGSSCASDS PSLPD----- ---------- ---------- ENSBTAP00000019773/1-517 SMKFRTE-AF VRSSSCALNS LSEPE----- ---------- ---------- bmy_02007T0/1-967 SMKFRTDMAF VRGSSCASDS PSEPAWQSLY GLAPVASPST LKTGLTEVIV BACU003234/1-524 SMKFRTDMAF VRGSSCASDS PSEPAWQ--- ---------- ---------- 551 600 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 TTFLGARRGW ERVQHEAQKE GKRDMEEERI CGWKRRSWGG PSIASTLNWL BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 APGSGGSAAG VPGLRPDERI KKPPRPPHAL TSPRPSAPSC VVTAWAGLPL BACU003234/1-524 ---------- VQGLR----- ---------- ---------- ---------- 651 700 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 PALPFPTSSG SRVLVPLVPG HLVASHHAGA CFSSLGDPRA SPPAPDEVHV BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 GDPVALGSRL RLGSRPASLP SLPAPHGAVC RLPMAGAAPT TAFGQAVIGP BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 PGSGKTTYCL GMSEFLRALG RRVAVVNLDP ANEGLPYECA VDVGELVGLG BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 DVMDALQLGP NGGLLYCMEY LEANLDWLRA KLDPLRGHYF LFDCPGQVEL BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 CTHHGALRSI FSQMAQWDLR LTAVHLVDSH YCTDPAKFIS VLCTSLATML BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000015811/1-520 ---------- ---------- ---------- ---------- ---------- ENSP00000354645/1-525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019773/1-517 ---------- ---------- ---------- ---------- ---------- bmy_02007T0/1-967 HVELPHVNLL SKMDLIEHYG KLANGYCFGV QEQRSLEAVM SAAVGADFHF BACU003234/1-524 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSTTRP00000015811/1-520 ---------- ---------- ----- ENSP00000354645/1-525 ---------- ---------- ----- ENSBTAP00000019773/1-517 ---------- ---------- ----- bmy_02007T0/1-967 SSTLGLQEKY LAPSEQSVEQ EAMQL BACU003234/1-524 ---------- ---------- -----