KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:09:21 2014 Check: 00 ..
Name: bmy_02336T0/1-408 Len: 436 Check: 1052 Weight: 1.00
Name: BACU000622/1-288 Len: 436 Check: 2932 Weight: 1.00
Name: ENSTTRP00000004132/1-266 Len: 436 Check: 4656 Weight: 1.00
Name: ENSP00000246533/1-268 Len: 436 Check: 9971 Weight: 1.00
Name: ENSBTAP00000019803/1-263 Len: 436 Check: 7180 Weight: 1.00
//
1 50
bmy_02336T0/1-408 --MFLAKTLL E----GADQG QGLGQALGDL L--------- ---------G
BACU000622/1-288 MRALVPGLWA KHNSGPPDAA CRDKARIGDK CQEPQEFLSE EAENHICGGG
ENSTTRP00000004132/1-266 --MFLVNSFL K-GGGGGGGG GGLGGGLGNV L---GGLISG GGG----GGG
ENSP00000246533/1-268 --MFLVNSFL KGGGGGGGGG GGLGGGLGNV L---GGLISG AGGG---GGG
ENSBTAP00000019803/1-263 --MFLVNSFL K-GGGGGGGG GGLGGGLGNV L---GGLISG -------AGG
51 100
bmy_02336T0/1-408 GGGQRRGGGG NIGG----IV GGLVNFISEA AAAQYTPEPP PTEQHFTNVE
BACU000622/1-288 GGGGGGGGGG GGGGTAMRIL GGVISAISE- AAAQYNPEPP PPRTHYSNIE
ENSTTRP00000004132/1-266 GGGGGGGGGG GGGGTAMRIL GGVISAISE- AAAQYNPEPP PPRTHYSNIE
ENSP00000246533/1-268 GGGGGGGGGG GGGGTAMRIL GGVISAISE- AAAQYNPEPP PPRTHYSNIE
ENSBTAP00000019803/1-263 GGGGGGGGGG GGGGTAMRIL GGVISAISE- AAAQYNPEPV PPRTHYSNIE
101 150
bmy_02336T0/1-408 ANESEEVRRF RQQFAQLAGP DMEVGATDLM NILNKVLSKH KDLKSDGFSL
BACU000622/1-288 ANESEEVRQF RRLFAQLAGE DMEVSATELM NILNKVVTRH PDLKTDGFGI
ENSTTRP00000004132/1-266 ANESEEVRQF RRLFAQLAGE DMEVSATELM NILNKVVTRH PDLKTDGFGI
ENSP00000246533/1-268 ANESEEVRQF RRLFAQLAGD DMEVSATELM NILNKVVTRH PDLKTDGFGI
ENSBTAP00000019803/1-263 ANESEEVRQF RRLFAQLAGD DMEVSATELM NILNKVVTRH PDLKTDGFGI
151 200
bmy_02336T0/1-408 DTCRSIVSIM DNDTTGKLGF EEFKYFWNNI KKWQRVYKQY DRDHSGSLGS
BACU000622/1-288 DTCRSMVAVM DSDTTGKLGF EEFKYLWNNI KKWQAIYKQF DIDSSGTIGS
ENSTTRP00000004132/1-266 DTCRSMVAVM DXXXXXXXXX XXXXXXXXXX XXXXTIYKQF DIDCSGTIGS
ENSP00000246533/1-268 DTCRSMVAVM DSDTTGKLGF EEFKYLWNNI KRWQAIYKQF DTDRSGTICS
ENSBTAP00000019803/1-263 DTCRSMVAVM DSDTTGKLGF EEFKYLWNNI KKWQAVYKQF DVDRSGTIGS
201 250
bmy_02336T0/1-408 SQLRGALQAA GFQLKEQLYQ MIVRRYTDED GSMDFNNFIG CLVRLDAMFR
BACU000622/1-288 SELPGAFEAA GFHLNEHLYN MIIRRYSDEE GNMDFDNFIS CLVRLDAMFR
ENSTTRP00000004132/1-266 SELPEAFEAA GFHLNEHLYN MIIRRYSDEE GNMDFDNFIS CLVRLDAMFR
ENSP00000246533/1-268 SELPGAFEAA GFHLNEHLYN MIIRRYSDES GNMDFDNFIS CLVRLDAMFR
ENSBTAP00000019803/1-263 SELPGAFEAA GFRLNEHLYN MIIRRYSDEG GNMDFDNFIS CLVRLDAMFR
251 300
bmy_02336T0/1-408 AFKSLDRDAD GLIQVSTQEW LQLTIWCYIF SGNLESSVST FSDEKVKNHD
BACU000622/1-288 AFKSLDRDGT GQIQVNIQEH YNSSYLGY-- ---------- ----------
ENSTTRP00000004132/1-266 AFKSLDKDGT GQIQVNIQEW LQLTMYS--- ---------- ----------
ENSP00000246533/1-268 AFKSLDKDGT GQIQVNIQEW LQLTMYS--- ---------- ----------
ENSBTAP00000019803/1-263 AFKSLDKDGT GQIQVNIQEW LQLTMYS--- ---------- ----------
301 350
bmy_02336T0/1-408 GSIDFREYVI GLAVLCNPAN TEEIIQVAFK LFDVDEDGFI TEEEFATILQ
BACU000622/1-288 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000004132/1-266 ---------- ---------- ---------- ---------- ----------
ENSP00000246533/1-268 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000019803/1-263 ---------- ---------- ---------- ---------- ----------
351 400
bmy_02336T0/1-408 ASLGVPDLDV SGLFKEIAQG DSVSYEEFKS FALKHPEYAK IFTTYLDLQT
BACU000622/1-288 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000004132/1-266 ---------- ---------- ---------- ---------- ----------
ENSP00000246533/1-268 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000019803/1-263 ---------- ---------- ---------- ---------- ----------
401 450
bmy_02336T0/1-408 CHVFSLPKEV QATPSVVSNK VSPESHEEST SDKKDD
BACU000622/1-288 ---------- --------RK LEEQSYPEP- ------
ENSTTRP00000004132/1-266 ---------- ---------- ---------- ------
ENSP00000246533/1-268 ---------- ---------- ---------- ------
ENSBTAP00000019803/1-263 ---------- ---------- ---------- ------