KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:21 2014 Check: 00 .. Name: ENSP00000350409/1-259 Len: 260 Check: 7332 Weight: 1.00 Name: ENSBTAP00000019807/1-260 Len: 260 Check: 9846 Weight: 1.00 Name: ENSTTRP00000005700/1-259 Len: 260 Check: 7819 Weight: 1.00 Name: bmy_20676T0/1-172 Len: 260 Check: 3005 Weight: 1.00 Name: BACU019100/1-259 Len: 260 Check: 7424 Weight: 1.00 // 1 50 ENSP00000350409/1-259 MLPSTSVNSL VQGNGVLNSR DAARHTAGAK RYKYLRRLFR FRQMDFEFAA ENSBTAP00000019807/1-260 MLPSTSVNSP AQGNGVLSSR DAARHTAGAK RYKYLRRLFR FRQMDFEFAA ENSTTRP00000005700/1-259 MLPSTSVNSP VQGNGVLSSR DAARHTAGAK RYKYLRRLFR FRQMDFEFAA bmy_20676T0/1-172 MLPSTSVNSP VQGNGVLSSR DAARHTAGAK RYKYLRRLFR FRQMDFEFAA BACU019100/1-259 MLPSTSVNSP VQGNGVLSSR DAARHTAGAK RYKYLRRLFR FRQMDFEFAA 51 100 ENSP00000350409/1-259 WQMLYLFTSP QRVYRNFHYR KQTKDQWARD DPAFLVLLSI WLCVSTIGFG ENSBTAP00000019807/1-260 WQMLYLFTSP QRVYRNFHYR KQTKDQWARD DPAFLVLLSI WLCVSTIGFG ENSTTRP00000005700/1-259 WQMLYLFTSP QRVYRNFHYR KQTKDQWARD DPAFLVLLSL WLCVSTIGFG bmy_20676T0/1-172 WQMLYLFTSP QRVYRNFHYR KQTKDQWARD DPAFLVLLSL WLC------- BACU019100/1-259 WQMLYLFTSP QRVYRNFHYR KQTKDQWARD DPAFLVLLSL WLCVSTIGFG 101 150 ENSP00000350409/1-259 FVLDMGFFET IKLLLWVVLI DCVGVGLLIA TLMWFISNKY LVKRQSRDYD ENSBTAP00000019807/1-260 FVLDMGFFET IKLLLWVVFI DCVGVGLLIS TLMWFISNKY LVKRQSRDYD ENSTTRP00000005700/1-259 FVLDMGFFET IKLLLWVVFI DCVGVGLLIS TLMWFISNKY LVKRQSRDYD bmy_20676T0/1-172 ---------- ---------- ---------- ---------- ---------- BACU019100/1-259 FVLDMGFFET IKLLLWVVFI DCVGVGLLIS TLMWFISNKY LVKRQSRDHD 151 200 ENSP00000350409/1-259 VEWGYAFDVH LNAFYPLLVI LHFIQLFFIN -HVILTDTFI GYLVGNTLWL ENSBTAP00000019807/1-260 VEWGYAFDVH LNAFYPLLVI LHFIQLFFIN PDVILTDTFI GYLVGNTLWL ENSTTRP00000005700/1-259 VEWGYAFDVH LNAFYPLLVI LHFIQLFFIN -HVILTDTFI GYLVGNTLWL bmy_20676T0/1-172 ---------- ---------- ---------- -DVILTDTFI GYLVGNTLWL BACU019100/1-259 VEWGYAFDVH LNAFYPLLVI LHFIQLFFIN -HVILTDTFI GYLVGNTLWL 201 250 ENSP00000350409/1-259 VAVGYYIYVT FLGYSALPFL KNTVILLYPF APLILLYGLS LALGWNFTHT ENSBTAP00000019807/1-260 VAVGYYIYVT FLGYSALPFL KNTVILLYPF APLILLYGLS LALGWNFTHT ENSTTRP00000005700/1-259 VAVGYYIYVT FLGYSALPFL KNTVILLYPF APLILLYGLS LALGWNFTHT bmy_20676T0/1-172 VAVGYYIYVT FLGYSALPFL KNTVILLYPF APLILLYGLS LALGWNFTRT BACU019100/1-259 VAVGYYIYVT FLGYSALPFL KNTVILLYPF APLILLYGLS LALGWNFTRT 251 300 ENSP00000350409/1-259 LCSFYKYRVK ENSBTAP00000019807/1-260 LCSFYKYRVK ENSTTRP00000005700/1-259 LCSFYKYRVK bmy_20676T0/1-172 LCSFYKYRVK BACU019100/1-259 LCSFYKYRVK