KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:24 2014 Check: 00 .. Name: ENSP00000385610/1-659 Len: 661 Check: 3357 Weight: 1.00 Name: ENSBTAP00000019818/1-516 Len: 661 Check: 6963 Weight: 1.00 Name: bmy_19759T0/1-464 Len: 661 Check: 9384 Weight: 1.00 Name: BACU019403/1-408 Len: 661 Check: 4404 Weight: 1.00 Name: ENSTTRP00000004304/1-656 Len: 661 Check: 4373 Weight: 1.00 // 1 50 ENSP00000385610/1-659 MPSGSSAALA LAAAPAPLPQ PPPPPPPPPP PLPPPSGGPE LEGDGLLLRE ENSBTAP00000019818/1-516 ---------- ---------- ---------- ---------- ---------- bmy_19759T0/1-464 ---------- ---------- ---------- ---------- ---------- BACU019403/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004304/1-656 MPNGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 51 100 ENSP00000385610/1-659 RLAALGLDDP SPAEPGAPAL RAPAAAAQGQ ARRAAELSPE ERAPPGRPGA ENSBTAP00000019818/1-516 ---------- ---------- ---------- ---------- ---------- bmy_19759T0/1-464 ---------- ---------- ---------- ---------- ---------- BACU019403/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004304/1-656 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000385610/1-659 PEAAELELEE DEEEGEEAEL DGDLLEEEEL EEAEEEDRSS LLLLSPPAAT ENSBTAP00000019818/1-516 ---------- ---------- ---------- ---------- -----PPAAA bmy_19759T0/1-464 ---------- ---------- ---------- ---------- ---------- BACU019403/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004304/1-656 XXXXXXXXXX XXXXXXXXXL DGDLLEEEEL EEAEESDRPS LLLLSPPAAA 151 200 ENSP00000385610/1-659 ASQTQQIPGG SLGSVLLPAA RFDAREAAAA AAAAGVLYGG DDAQGMMAAM ENSBTAP00000019818/1-516 ASQTQPIPGG SLGSVLLPAA GFDAREAAAA AAAAGVLYGG DDAQGMMAAM bmy_19759T0/1-464 ---------- ---------- ---------- ---------- -----MMAAM BACU019403/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004304/1-656 ASQTQPIPGG SLGSVLLPAA GFDARE---A AAAAGVLYGG DDAQGMMAAM 201 250 ENSP00000385610/1-659 LSHAYGPGGC G--AAAAALN GEQAALLRRK SVNTTECVPV PSSEHVAEIV ENSBTAP00000019818/1-516 LSHAYGPGGC GAAAAAAALN GEQAALLRRK SVNTTECVPV PSSEHVAEIV bmy_19759T0/1-464 LSHAYGPGGC G--AAAAALN GEQAALLRRK SVNTTECVPV PSSEHVAEIV BACU019403/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004304/1-656 LSHAYGPGGC G--AAAAALN GEQAALLRRK SVNTTECVPV PSSEHVAEIV 251 300 ENSP00000385610/1-659 GRQGCKIKAL RAKTNTYIKT PVRGEEPIFV VTGRKEDVAM AKREILSAAE ENSBTAP00000019818/1-516 GRQGCKIKAL RAKTNTYIKT PVRGEEPIFV VTGRKEDVAM AKREILSAAE bmy_19759T0/1-464 GRQGCKIKAL RAKTNTYIKT PVRGEEPIFV VTGRKEDVAM AKREILSAAE BACU019403/1-408 ---GCKIKAL RAKTNTYIKT PVRGEEPIFV VTGRKEDVAM AKREILSAAE ENSTTRP00000004304/1-656 GRQGCKIKAL RAKTNTYIKT PVRGEEPIFV VTGRKEDVAM AKREILSAAE 301 350 ENSP00000385610/1-659 HFSMIRASRN KNGPALGGLS CSPNLPGQTT VQVRVPYRVV GLVVGPKGAT ENSBTAP00000019818/1-516 HFSMIRASRN KNGPALGGLS CSPNLPGQTT VQVRVPYRVV GLVVGPKGAT bmy_19759T0/1-464 HFSMIRASRN KNGPALGGLS CSPNLPGQTT VQVRVPYRVV GLVVGPKGAT BACU019403/1-408 HFSMIRASRN KNGPALGGLS CSPNLPGQTT VQVRVPYRVV GLVVGPKGAT ENSTTRP00000004304/1-656 HFSMIRASRN KNGPALGGLS CSPNLPGQTT VQVRVPYRVV GLVVGPKGAT 351 400 ENSP00000385610/1-659 IKRIQQQTHT YIVTPSRDKE PVFEVTGMPE NVDRAREEIE MHIAMRTGNY ENSBTAP00000019818/1-516 IKRIQQQTHT YIVTPSRDKE PVFEVTGMPE NVDRAREEIE MHIAMRTGNY bmy_19759T0/1-464 IKRIQQQTHT YIVTPSRDKE PVFEVTGMPE NVDRAREEIE MHIAMRTGNY BACU019403/1-408 IKRIQQQTHT YIVTPSRDKE PVFEVTGMPE NVDRAREEIE MHIAMRTGNY ENSTTRP00000004304/1-656 IKRIQQQTHT YIVTPSRDKE PVFEVTGMPE NVDRAREEIE MHIAMRTGNY 401 450 ENSP00000385610/1-659 IELNEENDFH YNGTDVSFEG GTLGSAWLSS NPVPPSRARM ISNYRNDSSS ENSBTAP00000019818/1-516 IELNEENDFH YNGTDVSFEG GTLGSAWLSS NPVPPSRARM ISNYRNDSSS bmy_19759T0/1-464 IELNEENDFH YNGTDVSFEG GTLGSAWLSS NPVPPSRARM ISNYRNDSSS BACU019403/1-408 IELNEENDFH YNGTDVSFEG GTLGSAWLSS NPVPPSRARM ISNYRNDSSS ENSTTRP00000004304/1-656 IELNEENDFH YNGTDVSFEG GTLGSAWLSS NPVPPSRARM ISNYRNDSSS 451 500 ENSP00000385610/1-659 SLGSGSTDSY FGSNRLADFS PTSPFSTGNF WFGDTLPSVG SEDLAVDSPA ENSBTAP00000019818/1-516 SLGSGSTDSY FGSNRLADFS PTSPFSTGNF WFGDTLPSVG SEDLAVDSPA bmy_19759T0/1-464 SLGSGSTDSY FGSNRLADFS PTSPFSTGNF WFGDTLPSVG SEDLAVDSPA BACU019403/1-408 SLGSGSTDSY FGSNRLADFS PTSPFSTGNF WFGDTLPSVG SEDLAVDSPA ENSTTRP00000004304/1-656 SLGSGSTDSY FGSNRLADFS PTSPFSTGNF WFGDTLPSVG SEDLAVDSPA 501 550 ENSP00000385610/1-659 FDSLPTSAQT IWTPFEPVNP LSGFGSDPSG NMKTQRRGSQ PSTPRLSPTF ENSBTAP00000019818/1-516 FDSLPTSAQT IWTPFEPVNP LSGFGSDPPG NMKTQRRGSQ PSTPRLSPTF bmy_19759T0/1-464 FDSLPTSAQT IWTPFEPVNP LSGFGSDPPA NMKTQRRGSQ PSTPRLSPTF BACU019403/1-408 FDSLPTSAQT IWTPFEPVNP LSGFGSDPPA NMKTQRRGSQ PSTPRLSPTF ENSTTRP00000004304/1-656 FDSLPTSAQT IWTPFEPVNP LSGFGSDPPA NMKTQRRGSQ PSTPRLSPTF 551 600 ENSP00000385610/1-659 PESIEHPLAR RVRSDPPSTG NHVGLPIYIP AFSNGTNSYS SSNGGSTSSS ENSBTAP00000019818/1-516 PESIEHPLAR RVRSDPPSTG NHVGLPIYIP AFSNGTNSYS SSNGGSTSSS bmy_19759T0/1-464 PESIEHPLAR RVRSDPPSTG SHVGLPIYIP AFSNGTNSYS SSNGGSTSSS BACU019403/1-408 PESVEHPLAR RVRSDPPSTG SHAGLPIYIP AFSNGTNSYS SSNGGSTSSS ENSTTRP00000004304/1-656 PESVEHPLAR RVRSDPPSTG SHVGLPIYIP AFSNGTNSYS SSNGGSTSSS 601 650 ENSP00000385610/1-659 PPESRRKHDC VICFENEVIA ALVPCGHNLF CMECANKICE KRTPSCPVCQ ENSBTAP00000019818/1-516 PPESRRKHDC VICFENEVIA ALVPCGHNLF CMECANKICE KRTPSCPVCQ bmy_19759T0/1-464 PPESRRKHDC VICFENEVIA ALVPCGHNLF CMECANKICE KRTPSCPVCQ BACU019403/1-408 PPESRRKHDC VICFENEVIA ALVPCGHNLF CMECANKICE KRTPSCPVCQ ENSTTRP00000004304/1-656 PPESRRKHDC VICFENEVIA ALVPCGHNLF CMECANKICE KRTPSCPVCQ 651 700 ENSP00000385610/1-659 TAVTQAIQIH S ENSBTAP00000019818/1-516 TAVTQAIQIH S bmy_19759T0/1-464 TAVTQAIQIH S BACU019403/1-408 TAVTQAIQIH S ENSTTRP00000004304/1-656 TAVTQAIQIH S