KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:34 2014 Check: 00 .. Name: bmy_09830T0/1-368 Len: 376 Check: 1753 Weight: 1.00 Name: ENSBTAP00000019855/1-332 Len: 376 Check: 5372 Weight: 1.00 Name: ENSP00000264228/1-318 Len: 376 Check: 3891 Weight: 1.00 Name: BACU002239/1-255 Len: 376 Check: 2824 Weight: 1.00 Name: ENSTTRP00000000902/1-244 Len: 376 Check: 1099 Weight: 1.00 // 1 50 bmy_09830T0/1-368 MGKRKRGRRE EDDKEEERKV RMKGETRVTN WRPPPSVALT LLTR-ISAEF ENSBTAP00000019855/1-332 ---------- ---------M ATWAGTEVSA LNPLRAFWLT LAATFLLTLL ENSP00000264228/1-318 ---------- ---------M APWAEAEHSA LNPLRAVWLT LTAAFLLTLL BACU002239/1-255 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000902/1-244 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_09830T0/1-368 SSTLKSENKP DSGSIKKAKL YLRNGGKRIG KLKIVFLYKG LKWIHSDYYL ENSBTAP00000019855/1-332 LQLVPPGLLP GCAFFQDLIR YGKTKEGAPP RPAACRAFDV PKRYFSHFYI ENSP00000264228/1-318 LQLLPPGLLP GCAIFQDLIR YGKTKCGEPS RPAACRAFDV PKRYFSHFYI BACU002239/1-255 ---------- ---------- ---------- ---------- ---YFSHFYI ENSTTRP00000000902/1-244 ---------- ---------- ---------- ---------- ---YFSHFYI 101 150 bmy_09830T0/1-368 TCFPFAGIFL TSISSQCCGM ASCFGALLSL CLWEHLFQTG FIIYSEFLGL ENSBTAP00000019855/1-332 ISVLWNGFLL WSL-THSLFM GAPFPHWL-- ---HGLLR-- ------ILGT ENSP00000264228/1-318 ISVLWNGFLL WCL-TQSLFL GAPFPSWL-- ---HGLLR-- ------ILGA BACU002239/1-255 ISVLWNGFLL WSL-TQSLFV GAPFPNWL-- ---HHLLR-- ------ILGA ENSTTRP00000000902/1-244 ISVLWNGFLL WSL-TQSLFV GAPFPNWL-- ---HHLLR-- ------ILGA 151 200 bmy_09830T0/1-368 RNSK------ -DTQNNLKGD ELVLSAFLAL VFLWLHSLRR LFECFYVSVF ENSBTAP00000019855/1-332 AQFRVLLINL YRSLYKIVGG ELALSAFLVL VFLWLHSLRR LFECVYVSVF ENSP00000264228/1-318 AQFQ------ --------GG ELALSAFLVL VFLWLHSLRR LFECLYVSVF BACU002239/1-255 TQFR------ --------GD ELVLSAFLAL VFLWLHSLRR LFECFYVSVF ENSTTRP00000000902/1-244 AQFR------ --------GG ELVLSAFLVL VFLWLHSLRR LFECFYVSVF 201 250 bmy_09830T0/1-368 SNAMIHIVQY GFGLVYYVLV GLTVLSQVPM DGRNELANKI ILISVVYVVG ENSBTAP00000019855/1-332 SNAVIHAVQY CFGLVYYVLV GLTVLSQVPL DGRN------ -----VYVIG ENSP00000264228/1-318 SNVMIHVVQY CFGLVYYVLV GLTVLSQVPM DGRN------ -----AYITG BACU002239/1-255 SNAVIHVVQY GFGLVYYVLV GLTVLSQVPM DGRNELANKI ILISAVYVVG ENSTTRP00000000902/1-244 SNAMIHVVQY CFGLVYYVLV GLTVLSQVPM DGRN------ -----VYVIG 251 300 bmy_09830T0/1-368 KNLLMQARWF HILGMMMFIW SSVHQYKCHV ILGNLRKNKA GVVIHCNHRI ENSBTAP00000019855/1-332 KNLLMQARWF HILGMMMFIW SSAHQYKCHV ILSNLRKNKA GVVIHCNHRI ENSP00000264228/1-318 KNLLMQARWF HILGMMMFIW SSAHQYKCHV ILGNLRKNKA GVVIHCNHRI BACU002239/1-255 KNLWMQARWF HILGMMMFIW SSVHQYKCHV ILGNLRKNKA GVVIHCNHRI ENSTTRP00000000902/1-244 KNLLMQARWF HILGMMMFIW SSVHQYKCHV ILGNLRKNKA GVVIHCNHRI 301 350 bmy_09830T0/1-368 PFGDWFEYVS SPNYLAELMI YISMAVTFGF HNLTWWLVVT YVFFSQALSA ENSBTAP00000019855/1-332 PFGDWFEYVS SPNYLAELLI YISMAVTFGF YNLTWWLVVT YVFFNQALSA ENSP00000264228/1-318 PFGDWFEYVS SPNYLAELMI YVSMAVTFGF HNLTWWLVVT NVFFNQALSA BACU002239/1-255 PFGDWFEYVS SPNYLAELMI YISMAVTFGF HNLTWWLVVT YVFFSQALSA ENSTTRP00000000902/1-244 PFGDWFEYVS SPNYLAELMI YISMAVTFGF HNLTWWLVVT YVFFSQALSA 351 400 bmy_09830T0/1-368 FLSHKFYKSK FVSYPKHRKA FLPFLF ENSBTAP00000019855/1-332 FLSHKFYKSK FISYPKHRKA FLPFLF ENSP00000264228/1-318 FLSHQFYKSK FVSYPKHRKA FLPFLF BACU002239/1-255 FLSHKFYKSK FVSYPKHRKA FLPFLF ENSTTRP00000000902/1-244 FLSHKFYKSK FVSYPKHRKA FLPFLF