KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:36 2014 Check: 00 .. Name: ENSP00000354040/1-634 Len: 643 Check: 9364 Weight: 1.00 Name: ENSBTAP00000019864/1-634 Len: 643 Check: 1761 Weight: 1.00 Name: ENSTTRP00000010589/1-606 Len: 643 Check: 6213 Weight: 1.00 Name: bmy_09473T0/1-637 Len: 643 Check: 5698 Weight: 1.00 Name: BACU001792/1-634 Len: 643 Check: 3814 Weight: 1.00 // 1 50 ENSP00000354040/1-634 MAHYNFKKIT VVPSAKDFID LTLSKTQRKT PTVIHKHYQI HRIRHFYMRK ENSBTAP00000019864/1-634 MAHYNFKKIT VVPSAKDFID LTLSKTQRKT PTVIHKHYQI HRIRHFYMRK ENSTTRP00000010589/1-606 MAHYNFKKIT VVPSAKDFID LTLSKTQRKT PTVIHKHYQI HRIRHFYMRK bmy_09473T0/1-637 MAHYNFKKIT VVPSAKDFID LTLSKTQRKT PTVIHKHYQI HRIRHFYMRK BACU001792/1-634 MAHYNFKKIT VVPSAKDFID LTLSKTQRKT PTVIHKHYQI HRIRHFYMRK 51 100 ENSP00000354040/1-634 VKFTQQNYHD RLSQILTDFP KLDDIHPFYA DLMNILYDKD HYKLALGQIN ENSBTAP00000019864/1-634 VKFTQQNYHD RLSQILTDFP KLDDIHPFYA DLMNILYDKD HYKLALGQIN ENSTTRP00000010589/1-606 VKFTQQNYHD RLSQILTDFP KLDDSHPFYA DLMNILYDKD HYKLALGQIN bmy_09473T0/1-637 VKFTQQNYHD RLSQILTDFP KLDDIHPFYA DLMNILYDKD HYKLALGQIN BACU001792/1-634 VKFTQQNYHD RLSQILTDFP KLDDIHPFYA DLMNILYDKD HYKLALGQIN 101 150 ENSP00000354040/1-634 IAKNLVDNVA KDYVRLMKYG DSLYRCKQLK RAALGRMCTV IKRQKQSLEY ENSBTAP00000019864/1-634 IAKNLVDNVA KDYVRLMKYG DSLYRCKQLK RAALGRMCTI IKRQKQSLEY ENSTTRP00000010589/1-606 IAKNLVDNVA KDYVRLMKYG DSLYRCKQLK RAALGRMCTI IRRQKQSLEY bmy_09473T0/1-637 IAKNLVDNVA KDYVRLMKYG DSLYRCKQLK RAALGRMCTI IKRQKQSLEY BACU001792/1-634 IAKNLVDNVA KDYVRLMKYG DSLYRCKQLK RAALGRMCTI IKRQKQSLEY 151 200 ENSP00000354040/1-634 LEQVRQHLSR LPTIDPNTRT LLLCGYPNVG KSSFINKVTR ADVDVQPYAF ENSBTAP00000019864/1-634 LEQVRQHLSR LPTIDPNTRT LLLCGYPNVG KSSFINKVTR ADVDVQPYAF ENSTTRP00000010589/1-606 LEQVRQHLSR LPTIDPNTRT LLLCGYPNVG KSSFINKVTR ADVDVQPYAF bmy_09473T0/1-637 LEQVRQHLSR LPTIDPNTRT LLLCGYPNVG KSSFINKVTR ADVDVQPYAF BACU001792/1-634 LEQVRQHLSR LPTIDPNTRT LLLCGYPNVG KSSFINKVTR ADVDVQPYAF 201 250 ENSP00000354040/1-634 TTKSLFVGHM DYKYLRWQVV DTPGILDHPL EDRNTIEMQA ITALAHLRAA ENSBTAP00000019864/1-634 TTKSLFVGHM DYKYLRWQVV DTPGILDHPL EDRNTIEMQA ITALAHLRAA ENSTTRP00000010589/1-606 TTKSLFVGHM DYKYLRWQVV DTPGILDHPL EDRNTIEMQA ITALAHLRAA bmy_09473T0/1-637 TTKSLFVGHM DYKYLRWQVV DTPGILDHPL EDRNTIEMQA ITALAHLRAA BACU001792/1-634 TTKSLFVGHM DYKYLRWQVV DTPGILDHPL EDRNTIEMQA ITALAHLRAA 251 300 ENSP00000354040/1-634 VLYVMDLSEQ CGHGLREQLE LFQNIRPLFI NKPLIVVANK CDVKRIAELS ENSBTAP00000019864/1-634 VLYVMDLSEQ CGHGLAEQLE LFRNLRPLFV NKPLIVVANK CDVKKISELS ENSTTRP00000010589/1-606 VLYVMDLSEQ CGHGLGEQLE LFQNIRPLFV NKPLIIVANK CDVKRIAELS bmy_09473T0/1-637 VLYVMDLSEQ CGHGLGEQLE LFQNIRPLFV NKPLIVVANK CDVKRIAELS BACU001792/1-634 VLYVMDLSEQ CGHGLGEQLE LFQNIRPLFV NKPLIIVANK CDVKRIAELS 301 350 ENSP00000354040/1-634 EDDQKIFTDL QSEGFPVIET STLTEEGVIK VKTEACDRLL AHRVETKMKG ENSBTAP00000019864/1-634 EDNQKIFLDL QAEGFPVVET STLTEEGVIR VKTEACDRLL AHRVETKMKG ENSTTRP00000010589/1-606 EDDQKIFLDL QAEGFSVVET STLTEEGVIK VKTEACDRLL AHRVETKMKG bmy_09473T0/1-637 EDDQKIFLDL QAEGFSVVET STLTEEGVIK VKTEACDRLL AHRVETKMKG BACU001792/1-634 EDDQKIFLDL QAEGFSVVET STLTEEGVIK VKTEACDRLL AHRVETKMKG 351 400 ENSP00000354040/1-634 NKVNEVLNRL HLAIPTRRDD K------ERP PFIPEGVVAR RKRMETEESR ENSBTAP00000019864/1-634 NKVNEVLNRL HLAVPSRRDD K------ERP PFIPEGVVAR RKRMELGEPK ENSTTRP00000010589/1-606 NKVNEVLNRL HLAVPSRRDD KISLSSQERP PFIPEGVVAR RKRMELGEPK bmy_09473T0/1-637 NKVNEVLNRL HLAVPSRRDD K------GRP PFIPEGVMAR RKRMELREPK BACU001792/1-634 NKVNEVLNRL HLAVPSRRDD K------GRP PFIPEGVVAR RKRMELREPK 401 450 ENSP00000354040/1-634 KKRERDLELE MGDDYILDLQ KYWDLMNLSE KHDKIPEIWE GHNIADYIDP ENSBTAP00000019864/1-634 RRRERDLELE MGDDYILDLQ KYWDIMNSSE KYDKIPEIWE GHNIADYIDP ENSTTRP00000010589/1-606 RRRERDIELE MGDDYILDLQ KYWDIMNSSE KHDKIPEIWE GHNIADYIDP bmy_09473T0/1-637 RRRERDIELE MGDDYILDLQ KYWDIMNSXE KHDKIPEIWE GHNIADYIDP BACU001792/1-634 RRRERDIELE MGDDYILDLQ KYWDIMNSSE KHDKIPEIWE GHNIADYIDP 451 500 ENSP00000354040/1-634 AIMKKLEELE KEEELRTAAG EYDSVSESED EEMLEIRQLA KQIREKKKLK ENSBTAP00000019864/1-634 DIMQKLEELE KEEELRTAAG EYDSESESED EEMAEIRQLA KQIREKKKLK ENSTTRP00000010589/1-606 DIM------- ---------- ---------- -------QLA KQIREKKKLK bmy_09473T0/1-637 DIMQKLEELE KEEELRTAAG VYDSESETED EEMVEIQQLA KQIREKKKLK BACU001792/1-634 DIMQKLEELE KEEELRTAAG VYDSESETED EEMVEIQQLA KQIREKKKLK 501 550 ENSP00000354040/1-634 ILESKEKNTQ GPRMPRTAKK ---VQRTVLE KEMRSLGVDM DDKDDAHYAV ENSBTAP00000019864/1-634 ILQSREKDTQ GPRMPRTAKK ---VQRKVLE DEMRSLGVDM DDKDNAHYAV ENSTTRP00000010589/1-606 ILQSREKDTQ GPRMPRTAKK ---VQRKVLE DEMRSLGVDM DNKDNAHYVV bmy_09473T0/1-637 ILQSREKDTQ GPRMPRTAKK ASVVQRKVLE DEMRSLGVDM DNKDNAHYMV BACU001792/1-634 ILQSREKDTQ GPRMPRTAKK ---VQRKVLE NEMRSLGVDM DNKDNAHYMV 551 600 ENSP00000354040/1-634 QARRSRSITR KRKREDSAPP SSVARSGSCS RTPRDVSGLR DVKMVKKAKT ENSBTAP00000019864/1-634 QARRSRSITR KRKREDSVLP ASVTRSHSCS RPPRDVSGLR DVKMVKKAKT ENSTTRP00000010589/1-606 QARRARSVTR KRKREDSVPP TSVARIRSCS RTPRDVSGLR DVKMVKKAKT bmy_09473T0/1-637 QARRSRSVTR KRKREDSVPP TSVARSRSCS RTPRDVSGLR DVKMVKKAKT BACU001792/1-634 QARRSRSVTR KRKREDSVLP TSVARSRSCS RTPRDVSGLR DVKMVKKAKT 601 650 ENSP00000354040/1-634 MMKNAQKKMN RLGKKGEADR HVFDMKPKHL LSGKRKAGKK DRR ENSBTAP00000019864/1-634 MMKNAQKKMN RLGKKGEADR HVFDMKPKHL LSGKRKAGKK DRR ENSTTRP00000010589/1-606 MMKNAQKKMN RLGRKGEADR HVFDMKPKHL LSGKRKAGKK DRR bmy_09473T0/1-637 MMKNAQKKMN RLGRKGEADR HVFDMKPKHL LSGKRKAGKK DRR BACU001792/1-634 MMKNAQKKMN RLGRKGEADR HVFDMKPKHL LSGKRKAGKK DRR