KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:09:37 2014 Check: 00 ..
Name: ENSTTRP00000001832/1-798 Len: 804 Check: 2671 Weight: 1.00
Name: ENSP00000311196/1-802 Len: 804 Check: 4031 Weight: 1.00
Name: ENSBTAP00000019870/1-797 Len: 804 Check: 5952 Weight: 1.00
Name: bmy_07799T0/1-762 Len: 804 Check: 4632 Weight: 1.00
Name: BACU003510/1-798 Len: 804 Check: 1935 Weight: 1.00
//
1 50
ENSTTRP00000001832/1-798 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT
ENSP00000311196/1-802 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT
ENSBTAP00000019870/1-797 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT
bmy_07799T0/1-762 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT
BACU003510/1-798 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT
51 100
ENSTTRP00000001832/1-798 RKGVFFAGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000311196/1-802 RKGVFFAGGT PLAGPTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES
ENSBTAP00000019870/1-797 RKGVFFAGGT PLAGSTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES
bmy_07799T0/1-762 RKGVFFAGGT PLAGPTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES
BACU003510/1-798 RKGVFFAGGT PLAGPTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES
101 150
ENSTTRP00000001832/1-798 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000311196/1-802 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLTLPSA LDTDRLFRCR
ENSBTAP00000019870/1-797 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLALPSA LDTDRLFRCR
bmy_07799T0/1-762 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLTLPSA LDNDRLFRCR
BACU003510/1-798 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLTLPSA LDNDRLFRCR
151 200
ENSTTRP00000001832/1-798 XXTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR
ENSP00000311196/1-802 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLE--PR
ENSBTAP00000019870/1-797 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR
bmy_07799T0/1-762 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR
BACU003510/1-798 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR
201 250
ENSTTRP00000001832/1-798 PGPGPGPGPG PASLFLAMFQ SHHAKDLALL DISESVLIYL GFERSELLCK
ENSP00000311196/1-802 PRPGPGPGPG PASLFLAMFQ SRHAKDLALL DISESVLIYL GFERSELLCK
ENSBTAP00000019870/1-797 PGPGPGPGPG PASLFLAMFQ SRHAKDLALL DISESVLIYL GFERSELLCK
bmy_07799T0/1-762 PGPGPGPGPG PASLFLAMFQ SHHAKDLALL DISESVLIYL GFERSELLCK
BACU003510/1-798 PGPGPGPGPG PASLFLAMFQ SHHAKDLALL DISESVLIYL GFERSELLCK
251 300
ENSTTRP00000001832/1-798 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL
ENSP00000311196/1-802 SWYGLLHPED LAHASAQHYR LLAESGDIQA EMVVRLQAKT GGWAWIYCLL
ENSBTAP00000019870/1-797 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL
bmy_07799T0/1-762 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL
BACU003510/1-798 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL
301 350
ENSTTRP00000001832/1-798 YSEGPEGPIT ANNYPISDTE AWSLRQQLNS EETQAAYVLG TPTMLPSFPE
ENSP00000311196/1-802 YSEGPEGPIT ANNYPISDME AWSLRQQLNS EDTQAAYVLG TPTMLPSFPE
ENSBTAP00000019870/1-797 YSEGPEGPIT ANNYPISDME AWSLRQQLNS EETQAAYVLG TPTMLPSFPE
bmy_07799T0/1-762 YSEGPEGPIT ANNYPISDTE AWSLRQQLNS EETQAAYVLG TPTMLPSFPE
BACU003510/1-798 YSEGPEGPIT ANNYPISDTE AWSLRQQLNS EETQAAYVLG TPTMLPSFPE
351 400
ENSTTRP00000001832/1-798 SILSQEQCSG PNPLFT--MG PPRSTNFPSA PELGAVSTPE ELPQPPKELG
ENSP00000311196/1-802 NILSQEECSS TNPLFTAALG APRSTSFPSA PELSVVSASE ELPRPSKELD
ENSBTAP00000019870/1-797 NILSQEQCSS PNPLFT--MG PPRSTSFPSA PELGAVPTSE ELPQAPKDLG
bmy_07799T0/1-762 NILSQEQCSG PNPLFT--MG PPRSTDFPSA PELGAVSTPE ELPRPPKELG
BACU003510/1-798 NILSQEQCSG PNPLFT--MG PPRSTNFPSA PELGAVSTPE ELPRPPKELG
401 450
ENSTTRP00000001832/1-798 FSYLTFPSGP EPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL
ENSP00000311196/1-802 FSYLTFPSGP EPSLQAELSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL
ENSBTAP00000019870/1-797 F-YLTFPSGL QPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHM
bmy_07799T0/1-762 FSYLTFPSGP EPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL
BACU003510/1-798 FSYLTFPSGP EPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL
451 500
ENSTTRP00000001832/1-798 PTPSSSLQEQ LTPSTVTFSD QLTPSSATFP DPLTSPLQGQ LTETSARSYE
ENSP00000311196/1-802 PTPSSTLQEQ LTPSTATFSD QLTPSSATFP DPLTSPLQGQ LTETSVRSYE
ENSBTAP00000019870/1-797 PAPSSSLQEQ LTPSAVTFSD QLTPNSATFP DPLTSPLQGQ LTETSARSYE
bmy_07799T0/1-762 PTPSSSLQEQ LTPSTVTFSD QLTPSSATFP DPLTSPLQGQ LTETSARSYE
BACU003510/1-798 PTPSSSLQEQ LTPSTVTFSD QLTPSSATFP DPLTSPLQGQ LTETSARSYE
501 550
ENSTTRP00000001832/1-798 D---PCTSTF PDQLLPSTAT FPERLNSPAH EQVTSPSTAF QAHLNSPSQT
ENSP00000311196/1-802 DQLTPCTSTF PDQLLPSTAT FPEPLGSPAH EQLTPPSTAF QAHLDSPSQT
ENSBTAP00000019870/1-797 D---PCTSTF PDQLLPSAAT FPEPLSSPAQ EQLTSPSTSF QAHLNSPRQT
bmy_07799T0/1-762 D---PCTSTF PDQLLSSTAT FPEPLNSPAR EQVTSPSTAF QAHLNSPSQT
BACU003510/1-798 D---PCTSTF PDQLLPSTAT FPEPLNSPAR EQVNSPSTAF QAHLNSPSQT
551 600
ENSTTRP00000001832/1-798 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL
ENSP00000311196/1-802 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL
ENSBTAP00000019870/1-797 FPEQLSPNSS KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL
bmy_07799T0/1-762 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL
BACU003510/1-798 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL
601 650
ENSTTRP00000001832/1-798 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR
ENSP00000311196/1-802 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR
ENSBTAP00000019870/1-797 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QSEIDRLIQQ ISQLAQGMDR
bmy_07799T0/1-762 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR
BACU003510/1-798 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR
651 700
ENSTTRP00000001832/1-798 PFSAEAGTGG LEPLGGLEPL DPNLSLAGAG PPVLSLDLKP WKCQDLDFLT
ENSP00000311196/1-802 PFSAEAGTGG LEPLGGLEPL DSNLSLSGAG PPVLSLDLKP WKCQELDFLA
ENSBTAP00000019870/1-797 PFSAEAGTGG LEPLGGLEPL DSNLSLSGAG PPVLSLELKP WKCQDLDFLT
bmy_07799T0/1-762 PFSAEAGTGG LEPLGGLEPL DANLSLAGAG PPVLSLDLKP WKCQDLDFLA
BACU003510/1-798 PFSAEAGTGG LEPLGGLEPL DANLSLAGAG PPVLSLDLKP WKCQDLDFLA
701 750
ENSTTRP00000001832/1-798 DPD-IFLEET PVEDIFMDLS TPDPNGEWSS EDPEAAVPGG APSPRNNLSP
ENSP00000311196/1-802 DPDNMFLEET PVEDIFMDLS TPDPSEEWGS GDPEAEGPGG APSPCNNLSP
ENSBTAP00000019870/1-797 DPD-LFLEET PVEDIFMDLS TPDPNGEWES EDPEAAVPGG APSPCNNLSP
bmy_07799T0/1-762 DPD-IFLEET PVEDIFMDLS TPDPNGEWSS EDPEAAVPGG APSPCNNLSP
BACU003510/1-798 DPD-IFLEET PVEDIFMDLS TPDPNGEWSS EDPEAAVPGG APSPCNNLSP
751 800
ENSTTRP00000001832/1-798 EDSSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHEDGSGG
ENSP00000311196/1-802 EDHSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHEDGSGG
ENSBTAP00000019870/1-797 EDRSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHKDGSGG
bmy_07799T0/1-762 EDSSFLEDLA TYETAFET-- ---------- ---------- ----------
BACU003510/1-798 EDSSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHEDGSGG
801 850
ENSTTRP00000001832/1-798 EPTF
ENSP00000311196/1-802 EPTF
ENSBTAP00000019870/1-797 EPTF
bmy_07799T0/1-762 ----
BACU003510/1-798 EPTF