KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:37 2014 Check: 00 .. Name: ENSTTRP00000001832/1-798 Len: 804 Check: 2671 Weight: 1.00 Name: ENSP00000311196/1-802 Len: 804 Check: 4031 Weight: 1.00 Name: ENSBTAP00000019870/1-797 Len: 804 Check: 5952 Weight: 1.00 Name: bmy_07799T0/1-762 Len: 804 Check: 4632 Weight: 1.00 Name: BACU003510/1-798 Len: 804 Check: 1935 Weight: 1.00 // 1 50 ENSTTRP00000001832/1-798 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT ENSP00000311196/1-802 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT ENSBTAP00000019870/1-797 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT bmy_07799T0/1-762 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT BACU003510/1-798 MYRSTKGASK ARRDQINAEI RNLKELLPLA EADKVRLSYL HIMSLACIYT 51 100 ENSTTRP00000001832/1-798 RKGVFFAGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000311196/1-802 RKGVFFAGGT PLAGPTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES ENSBTAP00000019870/1-797 RKGVFFAGGT PLAGSTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES bmy_07799T0/1-762 RKGVFFAGGT PLAGPTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES BACU003510/1-798 RKGVFFAGGT PLAGPTGLLS AQELEDIVAA LPGFLLVFTA EGKLLYLSES 101 150 ENSTTRP00000001832/1-798 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000311196/1-802 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLTLPSA LDTDRLFRCR ENSBTAP00000019870/1-797 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLALPSA LDTDRLFRCR bmy_07799T0/1-762 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLTLPSA LDNDRLFRCR BACU003510/1-798 VSEHLGHSMV DLVAQGDSIY DIIDPADHLT VRQQLTLPSA LDNDRLFRCR 151 200 ENSTTRP00000001832/1-798 XXTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR ENSP00000311196/1-802 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLE--PR ENSBTAP00000019870/1-797 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR bmy_07799T0/1-762 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR BACU003510/1-798 FNTSKSLRRQ SAGNKLVLIR GRFHAHPPGA YWAGNPVFTA FCAPLETRPR 201 250 ENSTTRP00000001832/1-798 PGPGPGPGPG PASLFLAMFQ SHHAKDLALL DISESVLIYL GFERSELLCK ENSP00000311196/1-802 PRPGPGPGPG PASLFLAMFQ SRHAKDLALL DISESVLIYL GFERSELLCK ENSBTAP00000019870/1-797 PGPGPGPGPG PASLFLAMFQ SRHAKDLALL DISESVLIYL GFERSELLCK bmy_07799T0/1-762 PGPGPGPGPG PASLFLAMFQ SHHAKDLALL DISESVLIYL GFERSELLCK BACU003510/1-798 PGPGPGPGPG PASLFLAMFQ SHHAKDLALL DISESVLIYL GFERSELLCK 251 300 ENSTTRP00000001832/1-798 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL ENSP00000311196/1-802 SWYGLLHPED LAHASAQHYR LLAESGDIQA EMVVRLQAKT GGWAWIYCLL ENSBTAP00000019870/1-797 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL bmy_07799T0/1-762 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL BACU003510/1-798 SWYGLLHPED LGHASAQHYR LLAESGDIQA EMVVRLLAKP GGWAWIYCLL 301 350 ENSTTRP00000001832/1-798 YSEGPEGPIT ANNYPISDTE AWSLRQQLNS EETQAAYVLG TPTMLPSFPE ENSP00000311196/1-802 YSEGPEGPIT ANNYPISDME AWSLRQQLNS EDTQAAYVLG TPTMLPSFPE ENSBTAP00000019870/1-797 YSEGPEGPIT ANNYPISDME AWSLRQQLNS EETQAAYVLG TPTMLPSFPE bmy_07799T0/1-762 YSEGPEGPIT ANNYPISDTE AWSLRQQLNS EETQAAYVLG TPTMLPSFPE BACU003510/1-798 YSEGPEGPIT ANNYPISDTE AWSLRQQLNS EETQAAYVLG TPTMLPSFPE 351 400 ENSTTRP00000001832/1-798 SILSQEQCSG PNPLFT--MG PPRSTNFPSA PELGAVSTPE ELPQPPKELG ENSP00000311196/1-802 NILSQEECSS TNPLFTAALG APRSTSFPSA PELSVVSASE ELPRPSKELD ENSBTAP00000019870/1-797 NILSQEQCSS PNPLFT--MG PPRSTSFPSA PELGAVPTSE ELPQAPKDLG bmy_07799T0/1-762 NILSQEQCSG PNPLFT--MG PPRSTDFPSA PELGAVSTPE ELPRPPKELG BACU003510/1-798 NILSQEQCSG PNPLFT--MG PPRSTNFPSA PELGAVSTPE ELPRPPKELG 401 450 ENSTTRP00000001832/1-798 FSYLTFPSGP EPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL ENSP00000311196/1-802 FSYLTFPSGP EPSLQAELSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL ENSBTAP00000019870/1-797 F-YLTFPSGL QPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHM bmy_07799T0/1-762 FSYLTFPSGP EPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL BACU003510/1-798 FSYLTFPSGP EPSLQADLSK DLVCTPPYTP HQPGGCAFLF SLHEPFQTHL 451 500 ENSTTRP00000001832/1-798 PTPSSSLQEQ LTPSTVTFSD QLTPSSATFP DPLTSPLQGQ LTETSARSYE ENSP00000311196/1-802 PTPSSTLQEQ LTPSTATFSD QLTPSSATFP DPLTSPLQGQ LTETSVRSYE ENSBTAP00000019870/1-797 PAPSSSLQEQ LTPSAVTFSD QLTPNSATFP DPLTSPLQGQ LTETSARSYE bmy_07799T0/1-762 PTPSSSLQEQ LTPSTVTFSD QLTPSSATFP DPLTSPLQGQ LTETSARSYE BACU003510/1-798 PTPSSSLQEQ LTPSTVTFSD QLTPSSATFP DPLTSPLQGQ LTETSARSYE 501 550 ENSTTRP00000001832/1-798 D---PCTSTF PDQLLPSTAT FPERLNSPAH EQVTSPSTAF QAHLNSPSQT ENSP00000311196/1-802 DQLTPCTSTF PDQLLPSTAT FPEPLGSPAH EQLTPPSTAF QAHLDSPSQT ENSBTAP00000019870/1-797 D---PCTSTF PDQLLPSAAT FPEPLSSPAQ EQLTSPSTSF QAHLNSPRQT bmy_07799T0/1-762 D---PCTSTF PDQLLSSTAT FPEPLNSPAR EQVTSPSTAF QAHLNSPSQT BACU003510/1-798 D---PCTSTF PDQLLPSTAT FPEPLNSPAR EQVNSPSTAF QAHLNSPSQT 551 600 ENSTTRP00000001832/1-798 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL ENSP00000311196/1-802 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL ENSBTAP00000019870/1-797 FPEQLSPNSS KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL bmy_07799T0/1-762 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL BACU003510/1-798 FPEQLSPNPT KTYFAQEGCS FLYEKLPPSP SSPGNGDCTL LALAQLRGPL 601 650 ENSTTRP00000001832/1-798 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR ENSP00000311196/1-802 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR ENSBTAP00000019870/1-797 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QSEIDRLIQQ ISQLAQGMDR bmy_07799T0/1-762 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR BACU003510/1-798 SVDVPLVPEG LLTPEASPVK QSFFHYSEKE QNEIDRLIQQ ISQLAQGMDR 651 700 ENSTTRP00000001832/1-798 PFSAEAGTGG LEPLGGLEPL DPNLSLAGAG PPVLSLDLKP WKCQDLDFLT ENSP00000311196/1-802 PFSAEAGTGG LEPLGGLEPL DSNLSLSGAG PPVLSLDLKP WKCQELDFLA ENSBTAP00000019870/1-797 PFSAEAGTGG LEPLGGLEPL DSNLSLSGAG PPVLSLELKP WKCQDLDFLT bmy_07799T0/1-762 PFSAEAGTGG LEPLGGLEPL DANLSLAGAG PPVLSLDLKP WKCQDLDFLA BACU003510/1-798 PFSAEAGTGG LEPLGGLEPL DANLSLAGAG PPVLSLDLKP WKCQDLDFLA 701 750 ENSTTRP00000001832/1-798 DPD-IFLEET PVEDIFMDLS TPDPNGEWSS EDPEAAVPGG APSPRNNLSP ENSP00000311196/1-802 DPDNMFLEET PVEDIFMDLS TPDPSEEWGS GDPEAEGPGG APSPCNNLSP ENSBTAP00000019870/1-797 DPD-LFLEET PVEDIFMDLS TPDPNGEWES EDPEAAVPGG APSPCNNLSP bmy_07799T0/1-762 DPD-IFLEET PVEDIFMDLS TPDPNGEWSS EDPEAAVPGG APSPCNNLSP BACU003510/1-798 DPD-IFLEET PVEDIFMDLS TPDPNGEWSS EDPEAAVPGG APSPCNNLSP 751 800 ENSTTRP00000001832/1-798 EDSSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHEDGSGG ENSP00000311196/1-802 EDHSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHEDGSGG ENSBTAP00000019870/1-797 EDRSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHKDGSGG bmy_07799T0/1-762 EDSSFLEDLA TYETAFET-- ---------- ---------- ---------- BACU003510/1-798 EDSSFLEDLA TYETAFETGV SAFPYDGFTD ELHQLQSQVQ DSFHEDGSGG 801 850 ENSTTRP00000001832/1-798 EPTF ENSP00000311196/1-802 EPTF ENSBTAP00000019870/1-797 EPTF bmy_07799T0/1-762 ---- BACU003510/1-798 EPTF