KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:09:43 2014 Check: 00 .. Name: ENSP00000329448/1-1132 Len: 1170 Check: 9638 Weight: 1.00 Name: ENSBTAP00000019896/1-1160 Len: 1170 Check: 1895 Weight: 1.00 Name: bmy_18102T0/1-1136 Len: 1170 Check: 8475 Weight: 1.00 Name: ENSTTRP00000006851/1-1126 Len: 1170 Check: 5947 Weight: 1.00 // 1 50 ENSP00000329448/1-1132 ---------- ---------- ------MASD GASALPGPDM SMKPSAAPSP ENSBTAP00000019896/1-1160 YSLGPGPARL ILEASRQPQL VPKPETMSSD EASPLPGSDR TVNPGTALSP bmy_18102T0/1-1136 ---------- ---------- ------MSSD GASPLPGPDM TMKPGAALSP ENSTTRP00000006851/1-1126 ---------- ---------- ------MSSD GASPLPGHDM TLKPGAALSP 51 100 ENSP00000329448/1-1132 SPALPFLPPT SDPPDHPPRE PPPQPIMPSV FSPDNPLMLS AFPSSLLVTG ENSBTAP00000019896/1-1160 FTALTFPQPA PGPPDPPPWE PPSQPPVPSA FSPGNPLVLS AFPSPLLVTG bmy_18102T0/1-1136 FTALPFSQPA PGPPDQPPWE PPSQPPVPSA LSPGNPLVLS AFPSPLLVTG ENSTTRP00000006851/1-1126 FTALPFPQPG PGPSDQPPWG PPSQHPMPSA LSPGNPLVLS AFPSPLLVTG 101 150 ENSP00000329448/1-1132 DGGPCLSGAG AGKVIVKVKT EGGSAEPSQT QNFILTQTAL NSTAPGTPCG ENSBTAP00000019896/1-1160 DGGPGPSGAG AGKVIVKVKT EAGSAEPSQT QNFILTQTAL SWIASGAPCG bmy_18102T0/1-1136 DVGPGPSEAG AGKVIVKVKT EGGPAEPSQT QNFILTQAAL NWTASGSLFG ENSTTRP00000006851/1-1126 DGGPGPSGAG AGKVTVKVKT EGGPAEPSQT QNFILTQAAL NRTASGAPFG 151 200 ENSP00000329448/1-1132 GLEGPAPPFV TASNVKTILP SKAVGVSQEG PPGLPPQPPP PVAQLVPIVP ENSBTAP00000019896/1-1160 GPESPAPGLL TASNVKTLLP TKAVGLNQEG VPCLPAQAPP PAAQLAPIVP bmy_18102T0/1-1136 GPESPAPGFL TASNVKTLLP TKAVGVSQEG LPGLPTQAPL PAAQLAPIVP ENSTTRP00000006851/1-1126 GPESPAPGFL TASNVKTLLP PKAVGVSQES LPGLPTQAPL PAAQLAPIVP 201 250 ENSP00000329448/1-1132 LEKAWPGPHG TTGEGGPVAT LSKPSLGDRS KISKDVYENF RQWQRYKALA ENSBTAP00000019896/1-1160 PEKAWPGSQG TTGEGGPMAT RSKPSVGDLF YTSKGVYENF RRWQRYKPLA bmy_18102T0/1-1136 PEKASPGPHG ATGEGGPAAA RSKPSLDDLS YTSKGVYENF RCWQRYKALA ENSTTRP00000006851/1-1126 PEKASPGPHG ATGQGGPAAA QSKPSLDDLS YTSKGVYENF QCWQRYRALA 251 300 ENSP00000329448/1-1132 RRHLSQSPDT EALSCFLIPV LRSLARLKPT MTLEEGLPLA VQEWEHTSNF ENSBTAP00000019896/1-1160 RRHLSQSPDA EALSCFLIPV LRSLARLKPT MTLEEGLPRA VQEWERTSNF bmy_18102T0/1-1136 RRHLSQSPDA EALSCFLIPV LRSLARRKPT MTVEEGLPRA VQEWEHTSNF ENSTTRP00000006851/1-1126 RRHLSQSPDA EALSCFLIPV LRSPARRKPT MTMEEGLPRA VQEWERTSNF 301 350 ENSP00000329448/1-1132 DRMIFYEMAE RFMEFEA-EE MQIQNTQLMN GSQGLSPATP LKLDPLGPLA ENSBTAP00000019896/1-1160 DRMIFYEMAE KFMEFEAEEE MQIQNTQLTS GPQSLPPAAP LKLDPPGPPV bmy_18102T0/1-1136 DRMIFYEMAE KFMEFEAAEE MQVQNTQLMN GSPGMPPAAT LKLDPPGPPA ENSTTRP00000006851/1-1126 NRMIFYEMAE KFMEFEAAEE VQVQNTQLMN GSQGVPPEAP LKLDPPGTPA 351 400 ENSP00000329448/1-1132 SEVCQQPVYI PKKAASKTRA PRRRQRKAQR PPAPEAPKEI PPEAVKEYVD ENSBTAP00000019896/1-1160 PEVCPQPVYI PKKAASKARA PRRRQRKTQR PPAPEAPKEI PSEAVKEYAD bmy_18102T0/1-1136 PEVCQQAVYI PKKAASKARV PRRRQRKTWR PPAPEAPKEI PPEAVKEYTD ENSTTRP00000006851/1-1126 PEVCQQAVYI PKKAASKARG PRRRQRKTQR PPAPEAPKEI PPEAAKEYTD 401 450 ENSP00000329448/1-1132 IMEWLVGTHL ATGESDGKQE EEGQQQEEEG MYPDPGLLSY INELCSQKVF ENSBTAP00000019896/1-1160 IMEGLVGSHS ATEESDGRQE EQEQQPEE-G IYPDAGFLSY IDELCSQEVF bmy_18102T0/1-1136 IMEGLVVSHL ATEDSDGKQE EEEQQRQEEG MYPDAGLLSY INELCSQEAF ENSTTRP00000006851/1-1126 IMEGLLASHL ATEESDGKQE EEEQQRQEEG MYPDADLLSY IDELCSQEAF 451 500 ENSP00000329448/1-1132 VSKVEAVIHP QFLADLLSPE KQRDPLALIE ELEQEEGLTL AQLVQKRLMA ENSBTAP00000019896/1-1160 VSKVEAVIHP QFLADMLSPE QQRDPLALIE ELEQEEALSL AQLVQKRLLA bmy_18102T0/1-1136 VSKVEAVIHP QFLADLLSPE QQRDPLALTE ELEQEEGLGL VQLVQKRLLA ENSTTRP00000006851/1-1126 VSKVEAVIHP QFLADLLSPE QQRDPLALTE ELEQ-EGLGL VQLVQQRLLP 501 550 ENSP00000329448/1-1132 LEEEEDAEAP PSFSGAQLDS SPSGSVEDED GDGRLRPSPG LQGAGGAACL ENSBTAP00000019896/1-1160 LEEEEDAEAP PSCSGAQSDS SPSISDEDED GGGQLRPSPG PRGAGGSLRL bmy_18102T0/1-1136 LEEEEDAELP PSCSGALLDS SPSVSDEDED GGGQLQPSPG LWVAGGTVRL ENSTTRP00000006851/1-1126 LEEEEDAEAP PSCSGALLDS RPSVSDEDED GAGRPRPSPG LWVA------ 551 600 ENSP00000329448/1-1132 GKVSSSGKRA REVHGGQEQA LDSPRGMHRD GNTLPSPSSW DLQPELAAPQ ENSBTAP00000019896/1-1160 GKAASLGERA REVSGGQEPA LRGLRVMGRD GNTLPTPSGW GLQLELAAPQ bmy_18102T0/1-1136 GKSASPGKWA REVPGGQEQD LDGLRGMCRD GNTLPSPGGW DLQLELAAPQ ENSTTRP00000006851/1-1126 GKSASLGKRA REVPAGQEQD LDGLRGMCRD GNTLPSPSGW DLQLELAAPQ 601 650 ENSP00000329448/1-1132 GTPGPLGVER RGSGKVINQV SLHQDGHLGG AGPPGHCLVA DRTSEALPLC ENSBTAP00000019896/1-1160 GTQGPPSIEK RGPGEVTNQI SPPQDGLQGD AGSPGRSLGT DRTSETLPLR bmy_18102T0/1-1136 GTQGPLGIER RGSGKVTNQI APLQDDHLGG AESPGCSLVG DRTSEALPLC ENSTTRP00000006851/1-1126 GTQGPLRIER RGSGKVTNQI APLQDGHLGG AESPGCSLVG DRTSEALPLC 651 700 ENSP00000329448/1-1132 WQGGFQPEST PSLDAGLAEL APLQGQGLEK QVLGLQKGQQ TGGRGVLPQG ENSBTAP00000019896/1-1160 WQEGPQLELV PSLDVGLAGL APLQGQGLEK QTLGLPPGQE VEGLGVAPQS bmy_18102T0/1-1136 WQEGPQLEII PSLDAGLAEL APLQGKGSEK QALGVQTEQQ MGGLGVGPQE ENSTTRP00000006851/1-1126 WQEGPQFEIV LSLDAGLAEL APLQGQGSEK QALGLQTERQ IGGLGVAPQE 701 750 ENSP00000329448/1-1132 KEPLAVPWEG SSGAMWGDDR GTPMAQSYDQ NPSPRAAGER DD--VCLSPG ENSBTAP00000019896/1-1160 MEPSVLSQKG SSEATWGEDS GLPTVQSYDQ NPSPRPAGNR DEARASLSQR bmy_18102T0/1-1136 MEPLAVPQEG SSGATWGDDR GPPTVQSYDQ NPSPRAAGDR DGDGASLSPG ENSTTRP00000006851/1-1126 TEPLAVPQEG SSGAMWGDDR GPPTVQSYDQ NPSPRASGDR GGDGASLSPG 751 800 ENSP00000329448/1-1132 VWLSSEMDAV GLELPVQIEE VIESFQVEKC VTEYQEGCQG LGSRGNISLG ENSBTAP00000019896/1-1160 LWLSSEVDAA DLELPLQIEE IVENLHEGEC VTEPWGGGQA LGSRSRISLG bmy_18102T0/1-1136 VWLSSEMDAV GLELPLQIEE VIENFHDWEC VTEHQQGGQA LGSRSNISLG ENSTTRP00000006851/1-1126 VWLSSEMDAV GLEMPLQIEE VLENFHDWEC VTEHQQGSQA LGSRSNISLG 801 850 ENSP00000329448/1-1132 PGETLVPGDT ESSVIPCGGT VAAAALEKRN YCSLPGPLRA NSPPLRSKEN ENSBTAP00000019896/1-1160 PREALAPRDV GSSAVPCGDT DGTVALEERN YCGLAEPQTA NSPASRPRKD bmy_18102T0/1-1136 PGESTAPGDV GSSIVSCGGT DATAALEKRN YCSLSGPLRA NSPASSLKEN ENSTTRP00000006851/1-1126 PGENTAPGDV GSSIVSCGGT DATAALEKRN YCSSSGPLRA NSPASSLKEN 851 900 ENSP00000329448/1-1132 QEQSCETVGH PSDLWAEGCF PLLES--GDS TLGSSKETLP PTCQGNLLIM ENSBTAP00000019896/1-1160 MAQSPGTLQD PRDLWPEDRP PLLESRIGAS TLGASKETLL PASQGSTLIL bmy_18102T0/1-1136 REQSPETLRD PKHLWVEGCP PLLESRIGAS ALGASEETLL PASQGNILIL ENSTTRP00000006851/1-1126 REQSPETLWD PKHLWVEGCP PLLESRIGAS TLGASEETLL PANQGNILIL 901 950 ENSP00000329448/1-1132 GTEDASSLPE ASQEAGSRGN SFSPLLETIE PVNILDVKDD CGLQLRVSED ENSBTAP00000019896/1-1160 GTQDT--FPE ASPEAGSSGN SISPLLETTY -VDILDVRDA CGLQLEVSED bmy_18102T0/1-1136 GTQDTSSFPE ASPEAGSGGN SISPLVEATE QVNILDVRDA GGLQLGVSKD ENSTTRP00000006851/1-1126 GTQDTSSFPE ASPEAGSGGN STSPLVEATD QVNILDVRDA GGLQLGVSKD 951 1000 ENSP00000329448/1-1132 TCPLNVHSYD PQGEGRVDPD LSKPKNLAPL QESQESYTTG TPKATSSHQG ENSBTAP00000019896/1-1160 ICPLSFNSYD PQGEGRENTD LSEPKDLAPL PGDQESSGHG NPKSIPPHQG bmy_18102T0/1-1136 TCPLSFNSYD PQGEGREDTD FSEPKDLAPL PGNPESYAHG TPKSAAPFQG ENSTTRP00000006851/1-1126 TCPLSFNSYD PQGEGREDTD LSEPKDLAPL PGDPESYAHG TPKSTAPHQG 1001 1050 ENSP00000329448/1-1132 LGSTLPRRGT RNAIVPRETS -VSKTHRSAD RAKGKEKKKK EAEEEDEELS ENSBTAP00000019896/1-1160 LRSTSPSWGT KDALVAREAS PVIEAYSSAD GAKA----EE EGEEEDKELS bmy_18102T0/1-1136 LRSTSPR--- ---LVLREAS PVKETCSSAD GAKGKE-EEE EEDKEDKELS ENSTTRP00000006851/1-1126 LRSTSPR--- ---LVLREAS PVKETCSSAD GAKG----EE WWDEEDEEFS 1051 1100 ENSP00000329448/1-1132 NFAYLLASKL SLSPREHPLS PHHASG---- --GQGSQRAS HLLPAGAKGP ENSBTAP00000019896/1-1160 NFAYLLASKL SLSPRGVPLS SCPASGLLAS GHSQGTERAS HSLTPKPAGL bmy_18102T0/1-1136 NLAHLLASKL SLLLRGPPLS FRPASGLFSS G-GQGIQRAX HSLVPEARGL ENSTTRP00000006851/1-1126 NFAHLLASKL SLSPRGPPLS FRPASGLFSS G-GRGAQRAS HCLVAEARGL 1101 1150 ENSP00000329448/1-1132 SKLPYPVAKS GKRALAGGPA PTEKTPHSGA QLGVPREKPL ALGVVRPSQP ENSBTAP00000019896/1-1160 SQP--PAAES GKRALVGGPV PVEKRPLQGD EPRAPGEKPV ALGAIRTSQP bmy_18102T0/1-1136 SQPPYPVAKS GKPALVGGPA PAEKRPFQGA ELGAPGKKPL PLGAVRASKP ENSTTRP00000006851/1-1126 SQPPYPVAKS GKRALVGGPA PAEKRPFQGA DLGAPGKKPL PLGVVRAAQP 1151 1200 ENSP00000329448/1-1132 RKRRCDSFVT GRRKKRRRSQ ENSBTAP00000019896/1-1160 RKRKRDGFSK SRRKKRRRSQ bmy_18102T0/1-1136 RKRRRDSFLT GRRKKRRRTQ ENSTTRP00000006851/1-1126 RKRRRDGFLT GRRKKRCRTQ