KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:44 2014 Check: 00 .. Name: BACU006494/1-896 Len: 896 Check: 7068 Weight: 1.00 Name: ENSP00000221496/1-560 Len: 896 Check: 7931 Weight: 1.00 Name: ENSBTAP00000019912/1-575 Len: 896 Check: 7018 Weight: 1.00 Name: ENSTTRP00000009655/1-318 Len: 896 Check: 9239 Weight: 1.00 Name: bmy_06700T0/1-351 Len: 896 Check: 1218 Weight: 1.00 // 1 50 BACU006494/1-896 MDFQHRPGGK TGSGGVASSS ESNRDRRERL RQLALETIDI NKGSYLAHTQ ENSP00000221496/1-560 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019912/1-575 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 51 100 BACU006494/1-896 GKKHQTNLAR RAAKEAKEAP AQPAPEKVKV EVKKFVKIGR PGYKVTKQRD ENSP00000221496/1-560 ---------- ---------- ---------- ---------M RDLPLT---- ENSBTAP00000019912/1-575 ---------- ---------- ---------- ---------M PGPSLS---- ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------M QGPPLS---- 101 150 BACU006494/1-896 TEMGQQSLLF QIDYPEIAEG IMPRHRFMSA YEQRIEPPDR RWQYLLMAAE ENSP00000221496/1-560 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019912/1-575 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 151 200 BACU006494/1-896 PYETIAFKVP SREIDKAEGK FWTHWNRETK QLALVLSAMG ALLGARTLRG ENSP00000221496/1-560 ---------- ---------- ---------- SLALVLSALG ALLGTEALRA ENSBTAP00000019912/1-575 ---------- ---------- ---------- -LALVLSAMG ALLRPGTPRE ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- QLALVLSAMG ALLGARTLRG 201 250 BACU006494/1-896 EVPSTPALPR EPTPGSGGLI FHQDWDWPPP GIWPPGSPRD PLCLVTLDGG ENSP00000221496/1-560 E--------- EPAVGTSGLI FREDLDWP-- ----PGSPQE PLCLVALGGD ENSBTAP00000019912/1-575 EVFSTSALPR EQATGSGALI FQQAWDWPLS SLWLPGSPLD PLCLVTLHGS ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 EVPSTPVLPR EPTPGSGGLI FHQDWDWPPP GVWPPGSPRD PLCLVTLDGG 251 300 BACU006494/1-896 GNRSSAPLRV VGALSGYERA FLEAVRRAHW GPRDLATFAV CPHRDGQPAL ENSP00000221496/1-560 SNGSSSPLRV VGALSAYEQA FLGAVQRARW GPRDLATFGV CNTGDRQAAL ENSBTAP00000019912/1-575 GNGSRAPLRV VGVLSSYEQA FLEAVRRTHW GLSDLTTFAV CPAGNGQPVL ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 GNRSSAPLRV VGALSGYERA FLEAVRRAHW GPRDLATFAV CRHRDGQPAL 301 350 BACU006494/1-896 PHLRQLQAWL GGPGGRQLVV LHLEEVTWEP TPSLRFQEPP PGGASPEELA ENSP00000221496/1-560 PSLRRLGAWL RDPGGQRLVV LHLEEVTWEP TPSLRFQEPP PGGAGPPELA ENSBTAP00000019912/1-575 PHLQRLQAWL GEPGGRWLVV LHLEEVTWEP TPLLRFQEPP PGGASPPELA ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 PHLRQLQAWL GGPGGRRLVV LHLEEVTWEP TPSLRFQEPP PGGASPEELA 351 400 BACU006494/1-896 LMVLYPGPGP EVTVTGAGLP GAQSLCLSQD SSYLPLVVGR PEAAWRGPGL ENSP00000221496/1-560 LLVLYPGPGP EVTVTRAGLP GAQSLCPSRD TRYLVLAVDR PAGAWRGSGL ENSBTAP00000019912/1-575 LLVVYPGPGL EVTVTGAGLP GTQSLCLTAD SDFLALVVDH PEGAWRRPGL ENSTTRP00000009655/1-318 ---------- ---------- ---SLCLSRD SSYLPLVVGR PEAAWRGPGL bmy_06700T0/1-351 LMVLYPGPGP EVIVTGAGLP GAQSLCLSQD SSYLPLVVGR PEAAWRGPGL 401 450 BACU006494/1-896 ALTLRRRGNG RSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 ALTLQPRGED SRLSTARLQA LLFGDDHRCF TRMTPA-LLL LPRSEPAPLP ENSBTAP00000019912/1-575 ALTLRRRGNG ALLSTAQLQA LLFGADSRCF TRKTPALLLL LPARSSAPMP ENSTTRP00000009655/1-318 ALTLRRRGNG APLSTAQLQA LLFGADSRCF TRMTPA-LLL LPPRGPTPMP bmy_06700T0/1-351 ALTLRRRGNG APLSTAQLQA LLFGADSRCF TRMTPA-LLL LPPRGPAPMP 451 500 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 AHGQLDTVPF PPPRPSAELE ESPPSADPFL ETLTRLVRAL RVPPARASAP ENSBTAP00000019912/1-575 AHGRLDLVPF PQPRASPEPE EAPPSADPFL ETLTRLVRAL RGPPARASPP ENSTTRP00000009655/1-318 AHGQLDSVPF PQPRPSPEPE EAPPSADPFL ETLTRLVRAL RGPASRASPP bmy_06700T0/1-351 AHGRLDSVPF PQPRPSPEPE ETPPSADPFL ETLTRLVRAL RGPASRASPP 501 550 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 RLALDPDALA GFPQGLVNLS DPAALERLLD GEEPLLLLLR PTAATTGDPA ENSBTAP00000019912/1-575 RLALDPGALA GFPQGQVNLS DPAALERLLD GEEPLLLLLP PTAATTGVPA ENSTTRP00000009655/1-318 RLALDPGSLT GFPQGQVNLS DPAALERLLD GEEPLLLLLP PTAATPGVPA bmy_06700T0/1-351 RLALDPGALA GFPQGQVNLS DPAAL----- ---------- ---------- 551 600 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 PLHDPTSAPW ATALARRVAA ELQAAAAELR SLPGLPPATA PLLARLLALC ENSBTAP00000019912/1-575 TPQGPKSPLW AAGLARRVAA ELQAVAAELR ALPGLPPAAP PLLARLLALC ENSTTRP00000009655/1-318 PLQGPASALW AAGLARRVAA ELQAAAAELR GLPGLPPATT PLLARLLALC bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 601 650 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 PGGPGGLGDP LRALLLLKAL QGLRVEWRGR DPRGPGRAQR SAGATAADGP ENSBTAP00000019912/1-575 PGNPDGPGGP LRALLLLKAL QGLRAEWRGR ERSGSARAQR SAGAAAADGP ENSTTRP00000009655/1-318 PGNPVGPGGP LRALLLLKAL QGLRAEWRVR ERSGSARAQR SAGAAATDGP bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 651 700 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 CALRELSVDL RAERSVLIPE TYQANNCQGV CGWPQSDRNP RYGNHVVLLL ENSBTAP00000019912/1-575 CALRELSVDL RAERSVLIPE TYQANNCQGA CGWPQSDRNP RYGNHVVLLL ENSTTRP00000009655/1-318 CGLRELSVDL RAERSVLIPE TYQANNCQGA CGWPQSDRNP RY-------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 701 750 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 KMQVRGAALA RPPCCVPTAY AGKLLISLSE ERISAHHVPN MVATECGCR- ENSBTAP00000019912/1-575 KMQARGATLA RPPCCVPTAY TGKLLISLSE ERISAHHVPN MVATECGCR- ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 751 800 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221496/1-560 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019912/1-575 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 801 850 BACU006494/1-896 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XLRAHGLRRQ ENSP00000221496/1-560 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019912/1-575 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ---------- bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ---------- 851 900 BACU006494/1-896 APHQPVRGAH QRAPRAQHGG HRVWLPVTPR RAPASPYLFG PLHRPQ ENSP00000221496/1-560 ---------- ---------- ---------- ---------- ------ ENSBTAP00000019912/1-575 ---------- ---------- ---------- ---------- ------ ENSTTRP00000009655/1-318 ---------- ---------- ---------- ---------- ------ bmy_06700T0/1-351 ---------- ---------- ---------- ---------- ------