KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:45 2014 Check: 00 .. Name: ENSP00000466561/1-425 Len: 442 Check: 4211 Weight: 1.00 Name: ENSBTAP00000019915/1-424 Len: 442 Check: 9717 Weight: 1.00 Name: ENSTTRP00000007508/1-421 Len: 442 Check: 2466 Weight: 1.00 Name: bmy_22131T0/1-418 Len: 442 Check: 413 Weight: 1.00 Name: BACU018289/1-421 Len: 442 Check: 1289 Weight: 1.00 // 1 50 ENSP00000466561/1-425 -----MALTG YSW------- -----LLLSA TFLNVGAEIS ITLEPAQPSE ENSBTAP00000019915/1-424 ----KMVLIR SRW------- -----LLLSA AILSAGAEII ITPEPAQPAE ENSTTRP00000007508/1-421 -----MVLTR CSW------- -----LLLSA AFLSAGAEIS ITSEPAQPAE bmy_22131T0/1-418 MCQEPHLPLH QTWGAIKSTS SHPSGSFSSA AFLTVGAEIA ITPEPAQPAE BACU018289/1-421 -----MVLTR CSW------- -----LLLSA AFLSAGAEIT ITPEPAQPAE 51 100 ENSP00000466561/1-425 GDNVTLVVHG LSGELLAYSW YAGPTLSVSY LVASYIVSTG DETPGPAHTG ENSBTAP00000019915/1-424 GDNVTLAVQG LSGELLAYNW YAGPTLSLSY LVASYIVSTG DETPGPAHTG ENSTTRP00000007508/1-421 GDNVTLAVQG LSGELLAYNW YARPTLSLSY LVASYIVSTG DETPGPAHTG bmy_22131T0/1-418 GDNVTLAVQG LSGELLAYNW YAGPTLSLSY LVASYIVSTG DETPGPAHTG BACU018289/1-421 GDNVTLAVQG LSGELLAYNW YAGPTLSLSY LVASYIVSTG DETPGPAHTG 101 150 ENSP00000466561/1-425 REAVRPDGSL DIQGILPRHS GTYILQTFNR QLQTEVGYGH VQVHEILAQP ENSBTAP00000019915/1-424 REAVRPDGGL DIQGALPGHS GTYILQTLNR QFQTEVGYGH MQVYEILAQP ENSTTRP00000007508/1-421 REAVRPDGSL IIQGALPGHS GTYILQTLNR QFQTEVGYGH LQVYEILAQP bmy_22131T0/1-418 REAVRPDGGL DIQGALPGHS GTYILQTLNR QFQTEVGYGR LQVYEILAQP BACU018289/1-421 REAVRPDGGL DIQGALPGHS GTYLLQTLNR QFQTEVGYGR LQVYEILAQP 151 200 ENSP00000466561/1-425 TVLANSTALV ERRDTLRLMC SSPSPTAEVR WFFNGGALPV ALRLGLSPDG ENSBTAP00000019915/1-424 VVVANSTALV ERRDTLHLTC SSPSP-AEVR WFFNGDALPI AVRLGLSPNG ENSTTRP00000007508/1-421 VVMTNSTALV ERRDTMRLVC SSPSP-AEVR WFFNGDTLPI AVRLGLSPDG bmy_22131T0/1-418 VVMTNSTALV ERRDTLRLTC SSPSP-AEVR WFFNGDTLPI AVRLGLSPDG BACU018289/1-421 VVMTNGTALV ERRDTLRLTC SSPSP-AEVR WFFNGDTLPI AVRLGLSPDG 201 250 ENSP00000466561/1-425 RVLARHGIRR EEAGAYQCEV WNPVSVSRSE PINLTVYFGP ERVAILQDST ENSBTAP00000019915/1-424 RVLTRHGIRR EEAGAYQCEV WNPVSVSRSE PVNLTVYFGP ERVAILQDST ENSTTRP00000007508/1-421 RVLTRHGIRR EEAGAYQCEV WNPVSVSRSE PINLTVYFGP ERVAILQDST bmy_22131T0/1-418 RVLTRHGIRR EEAGAYQ--- ---------- -------FGP ERVAILQDST BACU018289/1-421 RVLTRHGIRR EEAGAYQCEV WNPVSVSRSE PINLTVYFGP ERVAILQDST 251 300 ENSP00000466561/1-425 TRTGCTIKVD FNTSLTLWCV SRSCPEPEYV WTFNGQALKN GQDHLNISSM ENSBTAP00000019915/1-424 TRTGCTIKVD FNTSLTLWCV SRSCPEPEYV WTFNGRALKS DQDHLNISSM ENSTTRP00000007508/1-421 ARTGCTIKVD FNTSFTLWCV SQSCPEPEYM WAFNGRALKN GQDHLNISSM bmy_22131T0/1-418 TRTGCTIKVD FNTSFTLRCV SRSCPEPEYM WVFNGRALKN GQDHLNISSM BACU018289/1-421 TRTGCTIKVD FNTSLTLWCV SRSCPEPEYM WVFNGRALKN GQDHLNISSM 301 350 ENSP00000466561/1-425 TAAQEGTYTC IAKNTKTLLS GSASVVVKLS AAAVATMIVP VPTKPTEGQD ENSBTAP00000019915/1-424 TATQEGTYTC IAKNPKTLLS GSASVVVKLS AATVIMTIVP VPTRPMEGQD ENSTTRP00000007508/1-421 TAAQEGTYTC IAKNPKTLLS GSASVVVKLS AAVVAMTIVP VPTRPMEGQD bmy_22131T0/1-418 TAAQEGTYTC IAKNPKTLLS GSASVVVKLS AAAVAMTIVP MPTRPMEGQD BACU018289/1-421 TAAQEGTYTC IAKNPKTLLS GSASVVIKLS AAAVAMTIVP MPTRPMEGQD 351 400 ENSP00000466561/1-425 VTLTVQGYPK DLLVYAWYRG PASEPNRLLS QLPSGTWIAG PAHTGREVGF ENSBTAP00000019915/1-424 VTLTVQGYPK DLLVYAWYRG PASEPNRLLS QLPSGNWIAG PAHTGREVGF ENSTTRP00000007508/1-421 VTLTVHGYPK DLLVYAWYRG PASEPNRLLS QLPSGNWIAG PAHTGREVGF bmy_22131T0/1-418 VTLTVQGYPK DLLVYAWYRG PASEPNRLLS QLPSGNWIAG PAHTGREVGF BACU018289/1-421 VTLTVQGYPK DLLVYAWYRG PASEPNRLLS QLPSGNWIAG PAHTGREVGF 401 450 ENSP00000466561/1-425 PNCSLLVQKL NLTDTGRYTL KTVTVQGKTE TLEVELQVAP LG ENSBTAP00000019915/1-424 PNCSLLVQKL NLTDAGRYTL KTVTLQGKTE TLEVELQVAR E- ENSTTRP00000007508/1-421 ANCSLLVQKL NLTDAGRYTL KTVTLQGKTE MLEVELQVA- -- bmy_22131T0/1-418 ANCSLLVQKL NLTDAGRYTL KTVTLQGKTE TLEVELQVA- -- BACU018289/1-421 ANCSLLVQKL NLTDAGRYTL KTVTLQGKTE TLEVELQVA- --