KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:45 2014 Check: 00 .. Name: ENSP00000265717/1-418 Len: 418 Check: 3267 Weight: 1.00 Name: ENSBTAP00000019916/1-418 Len: 418 Check: 2486 Weight: 1.00 Name: ENSTTRP00000006443/1-415 Len: 418 Check: 8591 Weight: 1.00 Name: bmy_12516T0/1-292 Len: 418 Check: 6860 Weight: 1.00 Name: BACU008789/1-252 Len: 418 Check: 9731 Weight: 1.00 // 1 50 ENSP00000265717/1-418 MSIEIPAGLT ELLQGFTVEV LRHQPADLLE FALQHFTRLQ QENERKGTAR ENSBTAP00000019916/1-418 MSIEIPAGLT ELLQGFTVEV LRHQPADLLE FALQHFTRLQ EENERKGAAR ENSTTRP00000006443/1-415 MSIEIPARLT ELLQGFTVEV LRHQPGDLQE VT-QQSTRLQ EEDERKGNAR bmy_12516T0/1-292 ---------- ---------- ---------- ------MFLG E--------- BACU008789/1-252 ---------- ---------- IIHPKTD--- ---DQRNRLQ E--------- 51 100 ENSP00000265717/1-418 FGHEGRTWGD LGAAAGGGTP SKGVNFAEEP MQSDSEDGEE EEAAPADAGA ENSBTAP00000019916/1-418 FGHEGRTWGD AGAAGGGGTP SKGVNFAEEP RHSDSENGEE EEEEAADAGA ENSTTRP00000006443/1-415 VGHEGRTGGD PGAAGGGGTP SKEVNFAEEP MHSGSENGEE EEA--TDAGA bmy_12516T0/1-292 ---------- ---------- ---------- ---------- --------GI BACU008789/1-252 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000265717/1-418 FNAPVINRFT RRASVCAEAY NPDEEEDDAE SRIIHPKTDD QRNRLQEACK ENSBTAP00000019916/1-418 FNAPVINRFT RRASVCAEAY NPDEEEDDAE SRIIHPKTDD QRNRLQEACK ENSTTRP00000006443/1-415 FNXXXXXXXX XXXXXCAEAY NPDEEEDDAE SRIIHPKTDD QRNRLQEACK bmy_12516T0/1-292 FK-----MSI FIFIVCAEAY NPDEEEDDAE SR-------- ---------- BACU008789/1-252 ---------A CKDILLFKNL DP-------- ---------- ---------- 151 200 ENSP00000265717/1-418 DILLFKNLDP EQMSQVLDAM FEKLVKDGEH VIDQGDDGDN FYVIDRGTFD ENSBTAP00000019916/1-418 DILLFKNLDP EQMSQVLDAM FEKLVKEGEH VIDQGDDGDN FYVIDRGTFD ENSTTRP00000006443/1-415 DILLFKNLDP EQMSQVLDAM FEKLVKEGEH VIDQGDDGDN FYVIDRGTFD bmy_12516T0/1-292 ---------- EQMSQVLDAM FEKLVKEGEH VIDQGDDGDN FYVIDRGTFD BACU008789/1-252 ---------- EQMSQVLDAM FEKLVKEGEH VIDQGDDGDN FYVIDRGTFD 201 250 ENSP00000265717/1-418 IYVKCDGVGR CVGNYDNRGS FGELALMYNT PRAATITATS PGALWGLDRV ENSBTAP00000019916/1-418 IYVKCDGVGR CVGNYDNRGS FGELALMYNT PRAATITATS PGALWGLDRV ENSTTRP00000006443/1-415 IYVKCDGVGR CVGNYDNRGS FGELALMYNT PRAATITATS PGALWGLDRV bmy_12516T0/1-292 IYVKCDGVGR CVGNYDNRGS FGELALMYNT PRAATITATS PGALWGLDRV BACU008789/1-252 IYVKCDGVGR CVGNYDNRGS FGELALMYNT PRAATITATS PGALWGL--- 251 300 ENSP00000265717/1-418 TFRRIIVKNN AKKRKMYESF IESLPFLKSL EFSERLKVVD VIGTKVYNDG ENSBTAP00000019916/1-418 TFRRIIVKNN AKKRKMYESF IESLPFLKSL EVSERLKVVD VIGTKVYNDG ENSTTRP00000006443/1-415 TFRRIIVKNN AKKRKMYESF IESLPFLKSL EVSERLKVVD VIGTKVYNDG bmy_12516T0/1-292 TFRRIIVKNN AKKRKMYESF IESLPFLKSL EVSERLKVVD VIGTKVYNDG BACU008789/1-252 ---------- ---------- ---------- -VSERLKVVD VIGTKVYNDG 301 350 ENSP00000265717/1-418 EQIIAQGDSA DSFFIVESGE VKITMKRKGK SEVEENGAVE IARCSRGQYF ENSBTAP00000019916/1-418 EQIIAQGDLA DSFFIVESGE VKITMKRKGK SEVEENGAVE IARCSRGQYF ENSTTRP00000006443/1-415 EQIIAQGDLA DSFFIVESGE VKITMKRKGK SEAEENGAVE IARCSRGQYF bmy_12516T0/1-292 EQIIAQGDLA DSFFIVESGE VKITMKRKGK SEAEENGAVE IARCSRGQYF BACU008789/1-252 EQIIAQGDLA DSFFIVESGE VKITMKRKGK SEAEENGAVE IARCSRGQYF 351 400 ENSP00000265717/1-418 GELALVTNKP RAASAHAIGT VKCLAMDVQA FERLLGPCME IMKRNIATYE ENSBTAP00000019916/1-418 GELALVTNKP RAASAHAIGT VKCLAMDVQA FERLLGPCME IMKRNIATYE ENSTTRP00000006443/1-415 GELALVTNKP RAASAHAIGT VKCLAMDVQA FERLLGPCME IMKRNIATYE bmy_12516T0/1-292 GELALVTNKP RAASAHAIGT VKCLAMDVQA FERLLGPCME IMKRNIATYE BACU008789/1-252 GELALVTNKP RAASAHAIGT VKCLAMDVQA FERLLGPCME IMKRNIATYE 401 450 ENSP00000265717/1-418 EQLVALFGTN MDIVEPTA ENSBTAP00000019916/1-418 EQLVALFGTN MDIVEPTA ENSTTRP00000006443/1-415 EQLVALFGTN MDIVEPTA bmy_12516T0/1-292 EQLVALFGTN MDIVEPTA BACU008789/1-252 EQLVALFGTN MDIVEPTA