KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:51 2014 Check: 00 .. Name: bmy_19145T0/1-229 Len: 327 Check: 7234 Weight: 1.00 Name: ENSP00000315417/1-326 Len: 327 Check: 2361 Weight: 1.00 Name: BACU020229/1-327 Len: 327 Check: 6082 Weight: 1.00 Name: ENSTTRP00000013888/1-326 Len: 327 Check: 1888 Weight: 1.00 Name: ENSBTAP00000019938/1-326 Len: 327 Check: 997 Weight: 1.00 // 1 50 bmy_19145T0/1-229 MEFLSEKFAL KSPPSKNSNF YMGAGGALEH VMETLDNESF YSKASAAKCV ENSP00000315417/1-326 MEFLSEKFAL KSPPSKNSDF YMGAGGPLEH VMETLDNESF YSKASAGKCV BACU020229/1-327 MEFLSEKFAL KSPPSKNSNF YMGAGGALEH VMETLDNESF YSKASAGKCV ENSTTRP00000013888/1-326 MEFLSEKFAL KSPPSKNSNF YMGAGGALEH VMETLDNESF YSKASAGKCV ENSBTAP00000019938/1-326 MEFLSEKFAL KSPPSKNSDF YMGAGGALEH VMETLDNESF YSKASAGKCV 51 100 bmy_19145T0/1-229 QAFGPLPRAE HHVRLERTSP CQDGSVNYGI TKVEGQQPLH TELNRAMDNC ENSP00000315417/1-326 QAFGPLPRAE HHVRLERTSP CQDSSVNYGI TKVEG-QPLH TELNRAMDNC BACU020229/1-327 QAFGPLPRAE HHVRLERTSP CQDGSVNYGI TKVEGQQPLH TELNRAMDNC ENSTTRP00000013888/1-326 QAFGPLPRAE HHVRLERTSP CQDGSVNYGI TKVEG-QPLH TELNRAMDNC ENSBTAP00000019938/1-326 QAFGPLPRAE HHVRLERTSP CQDSSVNYGI TKVEG-QPLH TELNRAMDNC 101 150 bmy_19145T0/1-229 NSLRMSPVKG MPEKGELDEL GDKCDSNVSS SKKRRHRTTF TSLQLEELEK ENSP00000315417/1-326 NSLRMSPVKG MQEKGELDEL GDKCDSNVSS SKKRRHRTTF TSLQLEELEK BACU020229/1-327 NSLRMSPVKG MPEKGELDEL GDKCDSNVSS SKKRRHRTTF TSLQLEELEK ENSTTRP00000013888/1-326 NSLRMSPVKG MPEKGELDEL GDKCDSNVSS SKKRRHRTTF TSLQLEELEK ENSBTAP00000019938/1-326 NSLRLSPVKG IPEKGELDEL GDKCDSNVSS SKKRRHRTTF TSLQLEELEK 151 200 bmy_19145T0/1-229 VFQKTHYPDV YVREQLALRT ELTEARVQVW FQNRRAKWRK RERYGQIQQA ENSP00000315417/1-326 VFQKTHYPDV YVREQLALRT ELTEARVQVW FQNRRAKWRK RERYGQIQQA BACU020229/1-327 VFQKTHYPDV YVREQLALRT ELTEARVQVW FQNRRAKWRK RERYGQIQQA ENSTTRP00000013888/1-326 VFQKTHYPDV YVREQLALRT ELTEARVQVW FQNRRAKWRK RERYGQIQQA ENSBTAP00000019938/1-326 VFQKTHYPDV YVREQLALRT ELTEARVQVW FQNRRAKWRK RERYGQIQQA 201 250 bmy_19145T0/1-229 KSHFAATYDI SVLPRTDSYP QFL------- ---------- ---------- ENSP00000315417/1-326 KSHFAATYDI SVLPRTDSYP QIQNNLWAGN ASGGSVVTSC MLPRDTSSCM BACU020229/1-327 KSHFAATYDI SVLPRTDSYP QIQNNLWAGN ASGGSVVTSC MLPRDTSSCM ENSTTRP00000013888/1-326 KSHFAATYDI SVLPRTDSYP QIQNNLWAGN ASGGSVVTSC MLPRDTSSCM ENSBTAP00000019938/1-326 KSHFAATYDI SVLPRTDSYP QIQNNLWAGN ASGGSVVTSC MLPRDTSSCM 251 300 bmy_19145T0/1-229 ---------- ---------- ------PL-- ---------- ---------- ENSP00000315417/1-326 TPYSHSPRTD SSYTGFSNHQ NQFSHVPLNN FFTDSLLTGA TNGHAFETKP BACU020229/1-327 TPYSHSPRTD SSYTGFSNHQ NQFSHVPLNN FFTDSLLTGA TNGHAFETKP ENSTTRP00000013888/1-326 TPYSHSPRTD SSYTGFSNHQ NQFSHVPLNN FFTDSLLTGA TNGHAFETKP ENSBTAP00000019938/1-326 TPYSHSPRTD SSYTGFSNHQ NQFSHVPLNN FFTDSLLTGA TNGHAFETKP 301 350 bmy_19145T0/1-229 ---------- ------EKHT ------- ENSP00000315417/1-326 EFERRSSSIA VLRMKAKEHT ANISWAM BACU020229/1-327 EFERRSSSIA VLRMKAKEHT ANISWAM ENSTTRP00000013888/1-326 EFERRSSSIA VLRMKAKEHT ANISWAM ENSBTAP00000019938/1-326 EFERRSSSIA VLRMKAKEHA ANISWAM