KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:52 2014 Check: 00 .. Name: ENSTTRP00000008319/1-234 Len: 234 Check: 8896 Weight: 1.00 Name: bmy_18584T0/1-161 Len: 234 Check: 3055 Weight: 1.00 Name: BACU018232/1-233 Len: 234 Check: 2396 Weight: 1.00 Name: ENSP00000203664/1-234 Len: 234 Check: 747 Weight: 1.00 Name: ENSBTAP00000019943/1-234 Len: 234 Check: 1324 Weight: 1.00 // 1 50 ENSTTRP00000008319/1-234 MSEASFNLIS EKCDTLSILR DHPENRIYQR KIQXXXXXXX XXXXXXXXXX bmy_18584T0/1-161 ---------- ---------- ---------- --QELSKRFT AIRKTKGDGN BACU018232/1-233 QSEASFNLIS EKCDILSILR DHPENRIYQR KIQELSKRFT AIRKTKGDGN ENSP00000203664/1-234 MSETSFNLIS EKCDILSILR DHPENRIYRR KIEELSKRFT AIRKTKGDGN ENSBTAP00000019943/1-234 MSETSFNLIS EKCDILSILR DHPENRIYQR KIQELSKRFT AIRKTKGDGN 51 100 ENSTTRP00000008319/1-234 XXXXXXXXXX XXXXXXXXXX XXXFKERVLQ TPNDLLAAGF EEHKFQNFFN bmy_18584T0/1-161 CFYRALGYSY LESLLGKSRE ILKFKERVLQ TPNDLLAAGF EEHKFQNFFN BACU018232/1-233 CFYRALGYSY LESLLGKSRE ILKFKERVLQ TPNDLLAAGF EEHKFQNFFN ENSP00000203664/1-234 CFYRALGYSY LESLLGKSRE IFKFKERVLQ TPNDLLAAGF EEHKFRNFFN ENSBTAP00000019943/1-234 CFYRALGYSY LESLLGKSRE ILKFKERVLQ TPNDLLVAGF EEHTFRNFFN 101 150 ENSTTRP00000008319/1-234 AFYSVVELVE KDSSVSSLLK VFNDQSSSDQ IVQFLRLLTS AFIRNRGDFF bmy_18584T0/1-161 AFYSVVELVE KDSSVSSLLK VFNDQSSSDR IVQFLRLLTS AFIRNRADFF BACU018232/1-233 AFYSVVELVE KDSSVSSLLK VFNDQSSSDR IVQFLRLLTS AFIRNRADFF ENSP00000203664/1-234 AFYSVVELVE KDGSVSSLLK VFNDQSASDH IVQFLRLLTS AFIRNRADFF ENSBTAP00000019943/1-234 AFYSVVELVE KDGSVSSLLK VFNDQSFSDR IVQFLRLLTS AFIRNRADFF 151 200 ENSTTRP00000008319/1-234 RHFIDEEMDI RDFCTHEVEP MATECDHIQI TALSQALNIA LQVEYVDEMD bmy_18584T0/1-161 RHFIDEEMDI RDFCTH-VGP RGPGCGD--- ---------- ------SASG BACU018232/1-233 RHFIDEEMDI RDFCTHVVEP MAMECDHIQI TALSQALNIA LQVEYVDEMD ENSP00000203664/1-234 RHFIDEEMDI KDFCTHEVEP MATECDHIQI TALSQALSIA LQVEYVDEMD ENSBTAP00000019943/1-234 RHFIDEEMDI KDFCAHEVEP MAMECDHIQI TALSQALNIA LQVEYVDEMD 201 250 ENSTTRP00000008319/1-234 TALNHHVFPE CAVPSVYLLY KTSHYNILYT ADKR bmy_18584T0/1-161 PGLRSH---- ---PSLRRRL ---------- ---- BACU018232/1-233 TALNHHVFPE AAIPSVYLLY KTSHYNILYA ADK- ENSP00000203664/1-234 TALNHHVFPE AATPSVYLLY KTSHYNILYA ADKH ENSBTAP00000019943/1-234 TALNHHVFPE AATPSVYLLY KTSHYNILYA ADKH