KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:53 2014 Check: 00 .. Name: ENSP00000363229/1-532 Len: 533 Check: 7034 Weight: 1.00 Name: ENSBTAP00000019955/1-524 Len: 533 Check: 2201 Weight: 1.00 Name: BACU007602/1-333 Len: 533 Check: 3460 Weight: 1.00 Name: ENSTTRP00000013958/1-528 Len: 533 Check: 1513 Weight: 1.00 Name: bmy_04276T0/1-528 Len: 533 Check: 1948 Weight: 1.00 // 1 50 ENSP00000363229/1-532 MESAEPAGQA RAAATKLSEA VGAALQEPRR QRRLVLVIVC VALLLDNMLY ENSBTAP00000019955/1-524 MEPEAPAGQA PAAASKLSEA VGAALQDPRR QRRLVLVIVC VALFLDNMLY BACU007602/1-333 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013958/1-528 MEPEAPAGQA PAAASKLSEA VGAALQDPRR QRRLVLVIVC VALLLDNMLY bmy_04276T0/1-528 MEPEAPAGQA PAAASKLSEA VGAALQDPRR QRRLVLVIVC VALFLDNMLY 51 100 ENSP00000363229/1-532 MVIVPIVPDY IAHMRGGGEG PTRTPEVWEP TLPLPTPANA SAYTANTSAS ENSBTAP00000019955/1-524 MVIVPIVPYY V---HAASEK PTPTP----- SPTPPTPTNA SAVTVNTSEP BACU007602/1-333 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013958/1-528 MVIVPIVPYY V---HSASEK PTLTSKVCVT TLPPPTPANA SADTVNTSES bmy_04276T0/1-528 MVIVPIVPYY V---HSASEK PTLTSKVCVT TLPPPTPANA SADTVNTSES 101 150 ENSP00000363229/1-532 PTAAWPAGSA LRPRYPTESE DVKIGVLFAS KAILQLLVNP LSGPFIDRMS ENSBTAP00000019955/1-524 PTAAMPAKSI VKPQHPRDNE DVKIGVLFAS KAILQLLVNP LSGTFIDRMS BACU007602/1-333 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013958/1-528 STAAMPDRST AQPQYPTDNE DVKIGVLFAS KAILQLLVNP LSGTFIDRMS bmy_04276T0/1-528 STAAMPARST AQPQYPTDNE DVKIGVLFAS KAILQLLVNP LSGTFIDRMS 151 200 ENSP00000363229/1-532 YDVPLLIGLG VMFASTVLFA FAEDYATLFA ARSLQGLGSA FADTSGIAMI ENSBTAP00000019955/1-524 YDLPLLLGLG VLFASTVMFA FAEDYATLFA ARSLQGLGSA FADTSGIAMI BACU007602/1-333 ---------- ---------- ---------- ---------- --------MI ENSTTRP00000013958/1-528 YDLPLLMGLG VLFASTVMFA FAEDYATLFA ARSLQGLGSA FADTSGIAMI bmy_04276T0/1-528 YDLPLLMGLG VLFASTVMFA FAEDYATLFA ARSLQGLGSA FADTSGIAMI 201 250 ENSP00000363229/1-532 ADKYPEEPER SRALGVALAF ISFGSLVAPP FGGILYEFAG KRVPFLVLAA ENSBTAP00000019955/1-524 ADKYPEEPER SRALGLALAF ISFGSLVAPP FGGFLHEFAG KSAPFLVLAA BACU007602/1-333 ADKYPEEPER SRALGLALAF ISFGSLVAPP FGGFLHKFVG KTAPFLVLAM ENSTTRP00000013958/1-528 ADKYPEEPER SRALGLALAF ISFGSLVAPP FGGFLHKFVG KTAPFLVLAM bmy_04276T0/1-528 ADKYPEEPER SRALGLALAF ISFGSLVAPP FGGFLHKFVG KTAPFLVLAM 251 300 ENSP00000363229/1-532 VSLFDALLLL AVAKPFSAAA RARANLPVGT PIHRLMLDPY IAVVAGALTT ENSBTAP00000019955/1-524 VSLFDALLLL VVAKPFSAAA RARANLPVGT PIHRLMLDPY IAVVAGALTT BACU007602/1-333 VSLLDALLLL VVVKPFSAAA RARANLPVGT PIHRLMLDPY IAVVAGALTT ENSTTRP00000013958/1-528 VSLLDALLLL VVAKPFSAAA RARANLPVGT PIHRLMLDPY IAVVAGALTT bmy_04276T0/1-528 VSLLDALLLL VVVKPFSAAA RARANLPVGT PIHRLMLDPY IAVVAGALTT 301 350 ENSP00000363229/1-532 CNIPLAFLEP TIATWMKHTM AASEWEMGMA WLPAFVPHVL GVYLTVRLAA ENSBTAP00000019955/1-524 CNIPLAFLEP TIATWMERTM AASEWEAGIA WLPAFVPHVL GVYLTVRLAA BACU007602/1-333 CNIPLAFLEP TIATWMEHTM AASEWDAGIA WLPAFVPHVL GVYLTVRLAA ENSTTRP00000013958/1-528 CNIPLAFLEP TIATWMEHTM AASEWDAGIA WLPAFVPHVL GVYLTVRLAA bmy_04276T0/1-528 CNIPLAFLEP TIATWMEHTM AASEWDAGIA WLPAFVPHVL GVYLTVRLAA 351 400 ENSP00000363229/1-532 RYPHLQWLYG ALGLAVIGAS SCIVPACRSF APLVVSLCGL CFGIALVDTA ENSBTAP00000019955/1-524 RYPHLQWLYG AFGLAVIGAS SCLVPACRSF APLVISLCGL CFGIALVDTA BACU007602/1-333 RYPHLQWLYG AFGLAVIGAS SCLVPACRSF APLVLSLCGL CFGIALVDTA ENSTTRP00000013958/1-528 RYPHLQWLYG AFGLAVIGAS SCLVPACRSF APLVVSLCGL CFGIALVDTA bmy_04276T0/1-528 RYPHLQWLYG AFGLAVIGAS SCLVPACRSF APLVVSLCGL CFGIALVDTA 401 450 ENSP00000363229/1-532 LLPTLAFLVD VRHVSVYGSV YAIADISYSV AYALGPIVAG HIVHSLGFEQ ENSBTAP00000019955/1-524 LLPTLAFLVD VRHVSVYGSV YAIADISYCV AYALGPIVAG HIVHSLGFAQ BACU007602/1-333 LLPTLAFLVD VRHVSVYGSV YAIADISYCV AYALGPIVAG HIVHSLGFEQ ENSTTRP00000013958/1-528 LLPTLAFLVD VRHVSVYGSV YAIADISYCV AYALGPIVAG HIVHSLGFEQ bmy_04276T0/1-528 LLPTLAFLVD VRHVSVYGSV YAIADISYCV AYALGPIVAG HIVHSLGFEQ 451 500 ENSP00000363229/1-532 LSLGMGLANL LYAPVLLLLR NVGLLTRSRS ERDVLLDEPP QGLYDAVRLR ENSBTAP00000019955/1-524 LSLGMGLANL LYAPVLLLLR NVGLLKRSRS ERDVLLDEPP QGLYDAVRLR BACU007602/1-333 LSLVMGLANL LYAPVLLLLR NVGRLKRSRS ERDVLLDEPP QGLYDAVRLR ENSTTRP00000013958/1-528 LSLVMGLANL LYAPVLLLLR NVGRLKRSRS ERDVLLDEPP QGLYDAVRLR bmy_04276T0/1-528 LSLVMGLANL LYAPVLLLLR NVGRLKRSRS ERDVLLDEPP QGLYDAVRLR 501 550 ENSP00000363229/1-532 ERPVSGQDGE PRSPPGPFDA C-EDDYNYYY TRS ENSBTAP00000019955/1-524 ERPMSDRDGA PRSPPGPFDA CEEDDYD-YY TRS BACU007602/1-333 ERPLSDREGA PRSPSGPFDA C-EDDYD-DY TRS ENSTTRP00000013958/1-528 ERPLSDREGA PRSPPGPFDA C-EDDYD-YY TRS bmy_04276T0/1-528 ERPLSDREGA PRSPSGPFDA C-EDDYD-YY TRS